RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 ARL6Q9H0F7 186 aa1.6□□□□□ -2.15
SMCHD1-204ENST00000581226 SLC23A2Q9UGH3 650 aa1.6□□□□□ -2.15
SMCHD1-204ENST00000581226 CLUHO75153 1309 aa1.6□□□□□ -2.15
SMCHD1-204ENST00000581226 NAV1Q8NEY1 1877 aa1.59□□□□□ -2.15
SMCHD1-204ENST00000581226 C9J4A7 227 aa1.59□□□□□ -2.15
SMCHD1-204ENST00000581226 F5H5T6 163 aa1.59□□□□□ -2.15
SMCHD1-204ENST00000581226 UGT2B11O75310 529 aa1.59□□□□□ -2.15
SMCHD1-204ENST00000581226 ADAP1O75689 374 aa1.59□□□□□ -2.15
SMCHD1-204ENST00000581226 FOXF1Q12946 379 aa1.59□□□□□ -2.15
SMCHD1-204ENST00000581226 APOFQ13790 326 aa1.59□□□□□ -2.15
SMCHD1-204ENST00000581226 PDGFRLQ15198 375 aa1.59□□□□□ -2.15
SMCHD1-204ENST00000581226 ZNHIT3Q15649 155 aaPredicted RBP1.59□□□□□ -2.15
SMCHD1-204ENST00000581226 EBLN2Q6P2I7 272 aa1.59□□□□□ -2.15
SMCHD1-204ENST00000581226 Q6ZS52 159 aa1.59□□□□□ -2.15
SMCHD1-204ENST00000581226 TCF23Q7RTU1 214 aa1.59□□□□□ -2.15
SMCHD1-204ENST00000581226 DNAAF3Q8N9W5 541 aa1.59□□□□□ -2.15
SMCHD1-204ENST00000581226 OR7G1Q8NGA0 311 aa1.59□□□□□ -2.15
SMCHD1-204ENST00000581226 OR5D18Q8NGL1 313 aa1.59□□□□□ -2.15
SMCHD1-204ENST00000581226 HIST1H2BAQ96A08 127 aa1.59□□□□□ -2.15
SMCHD1-204ENST00000581226 C1orf109Q9NX04 203 aa1.59□□□□□ -2.15
SMCHD1-204ENST00000581226 EIF4G1Q04637 1599 aaKnown RBP1.59□□□□□ -2.16
SMCHD1-204ENST00000581226 CRB1P82279 1406 aa1.58□□□□□ -2.16
SMCHD1-204ENST00000581226 ERICH2A1L162 156 aa1.58□□□□□ -2.16
SMCHD1-204ENST00000581226 TMEM213A2RRL7 107 aa1.58□□□□□ -2.16
SMCHD1-204ENST00000581226 CYTH3O43739 400 aa1.58□□□□□ -2.16
SMCHD1-204ENST00000581226 RAB36O95755 333 aa1.58□□□□□ -2.16
SMCHD1-204ENST00000581226 ASS1P00966 412 aaKnown RBP1.58□□□□□ -2.16
SMCHD1-204ENST00000581226 DLX6P56179 175 aa1.58□□□□□ -2.16
SMCHD1-204ENST00000581226 RAB8AP61006 207 aa1.58□□□□□ -2.16
SMCHD1-204ENST00000581226 ANGPT1Q15389 498 aa1.58□□□□□ -2.16
SMCHD1-204ENST00000581226 C4orf26Q17RF5 130 aa1.58□□□□□ -2.16
SMCHD1-204ENST00000581226 LRRC26Q2I0M4 334 aa1.58□□□□□ -2.16
SMCHD1-204ENST00000581226 SPIN4Q56A73 249 aa1.58□□□□□ -2.16
SMCHD1-204ENST00000581226 Q6ZRU5 148 aa1.58□□□□□ -2.16
SMCHD1-204ENST00000581226 MTERF4Q7Z6M4 381 aaKnown RBP1.58□□□□□ -2.16
SMCHD1-204ENST00000581226 RIBC1Q8N443 379 aaPredicted RBP1.58□□□□□ -2.16
SMCHD1-204ENST00000581226 ZFAND2AQ8N6M9 145 aa1.58□□□□□ -2.16
SMCHD1-204ENST00000581226 KRTAP4-1Q9BYQ7 146 aa1.58□□□□□ -2.16
SMCHD1-204ENST00000581226 WDR54Q9H977 334 aa1.58□□□□□ -2.16
SMCHD1-204ENST00000581226 KCNIP2Q9NS61 270 aa1.58□□□□□ -2.16
SMCHD1-204ENST00000581226 DMAC2Q9NW81 257 aa1.58□□□□□ -2.16
SMCHD1-204ENST00000581226 VPREB3Q9UKI3 123 aa1.58□□□□□ -2.16
SMCHD1-204ENST00000581226 HSPE1-MOB4S4R3N1 261 aa1.58□□□□□ -2.16
SMCHD1-204ENST00000581226 RAD50Q92878 1312 aa1.58□□□□□ -2.16
SMCHD1-204ENST00000581226 ICE1Q9Y2F5 2266 aa1.57□□□□□ -2.16
SMCHD1-204ENST00000581226 C17orf98A8MV24 154 aa1.57□□□□□ -2.16
SMCHD1-204ENST00000581226 F8VZ95 297 aa1.57□□□□□ -2.16
SMCHD1-204ENST00000581226 TOR1AO14656 332 aa1.57□□□□□ -2.16
SMCHD1-204ENST00000581226 PHYHO14832 338 aa1.57□□□□□ -2.16
SMCHD1-204ENST00000581226 TOX3O15405 576 aaPredicted RBP1.57□□□□□ -2.16
SMCHD1-204ENST00000581226 CTSEP14091 401 aa1.57□□□□□ -2.16
SMCHD1-204ENST00000581226 AKR1C4P17516 323 aa1.57□□□□□ -2.16
SMCHD1-204ENST00000581226 CRABP1P29762 137 aa1.57□□□□□ -2.16
SMCHD1-204ENST00000581226 CBX5P45973 191 aa1.57□□□□□ -2.16
SMCHD1-204ENST00000581226 LINC00313P59037 77 aa1.57□□□□□ -2.16
SMCHD1-204ENST00000581226 DEFA6Q01524 100 aa1.57□□□□□ -2.16
SMCHD1-204ENST00000581226 DMTNQ08495 405 aa1.57□□□□□ -2.16
SMCHD1-204ENST00000581226 PAFAH1B3Q15102 231 aaKnown RBP1.57□□□□□ -2.16
SMCHD1-204ENST00000581226 OR8G1Q15617 311 aa1.57□□□□□ -2.16
SMCHD1-204ENST00000581226 TMEM176BQ3YBM2 270 aaPredicted RBP1.57□□□□□ -2.16
SMCHD1-204ENST00000581226 HENMT1Q5T8I9 393 aaKnown RBP1.57□□□□□ -2.16
SMCHD1-204ENST00000581226 NIT1Q86X76 327 aa1.57□□□□□ -2.16
SMCHD1-204ENST00000581226 OR4P4Q8NGL7 312 aa1.57□□□□□ -2.16
SMCHD1-204ENST00000581226 CD200R1Q8TD46 325 aa1.57□□□□□ -2.16
SMCHD1-204ENST00000581226 GPR22Q99680 433 aa1.57□□□□□ -2.16
SMCHD1-204ENST00000581226 UGT2B28Q9BY64 529 aa1.57□□□□□ -2.16
SMCHD1-204ENST00000581226 GNB1LQ9BYB4 327 aa1.57□□□□□ -2.16
SMCHD1-204ENST00000581226 C16orf95Q9H693 158 aa1.57□□□□□ -2.16
SMCHD1-204ENST00000581226 C11orf49Q9H6J7 331 aa1.57□□□□□ -2.16
SMCHD1-204ENST00000581226 TAS2R9Q9NYW1 312 aa1.57□□□□□ -2.16
SMCHD1-204ENST00000581226 ADAMTS7Q9UKP4 1686 aa1.56□□□□□ -2.16
SMCHD1-204ENST00000581226 FABP12A6NFH5 140 aa1.56□□□□□ -2.16
SMCHD1-204ENST00000581226 ARGFXA6NJG6 315 aa1.56□□□□□ -2.16
SMCHD1-204ENST00000581226 F5H5K5 113 aa1.56□□□□□ -2.16
SMCHD1-204ENST00000581226 CDK14O94921 469 aa1.56□□□□□ -2.16
SMCHD1-204ENST00000581226 HSPA13P48723 471 aa1.56□□□□□ -2.16
SMCHD1-204ENST00000581226 CLDN12P56749 244 aa1.56□□□□□ -2.16
SMCHD1-204ENST00000581226 UBE2G2P60604 165 aa1.56□□□□□ -2.16
SMCHD1-204ENST00000581226 BSPH1Q075Z2 132 aa1.56□□□□□ -2.16
SMCHD1-204ENST00000581226 FAM229BQ4G0N7 80 aa1.56□□□□□ -2.16
SMCHD1-204ENST00000581226 MESTQ5EB52 335 aa1.56□□□□□ -2.16
SMCHD1-204ENST00000581226 CENPWQ5EE01 88 aa1.56□□□□□ -2.16
SMCHD1-204ENST00000581226 ACSBG2Q5FVE4 666 aa1.56□□□□□ -2.16
SMCHD1-204ENST00000581226 FAM45BPQ6NSW5 357 aa1.56□□□□□ -2.16
SMCHD1-204ENST00000581226 CRLF3Q8IUI8 442 aa1.56□□□□□ -2.16
SMCHD1-204ENST00000581226 TMEM75Q8N9X5 138 aa1.56□□□□□ -2.16
SMCHD1-204ENST00000581226 OR5L1Q8NGL2 311 aa1.56□□□□□ -2.16
SMCHD1-204ENST00000581226 OR5AK3PQ8NH89 298 aa1.56□□□□□ -2.16
SMCHD1-204ENST00000581226 RNASE11Q8TAA1 199 aaKnown RBP1.56□□□□□ -2.16
SMCHD1-204ENST00000581226 TAMM41Q96BW9 452 aa1.56□□□□□ -2.16
SMCHD1-204ENST00000581226 ZNF514Q96K75 400 aaPredicted RBP1.56□□□□□ -2.16
SMCHD1-204ENST00000581226 TRNT1Q96Q11 434 aaKnown RBP1.56□□□□□ -2.16
SMCHD1-204ENST00000581226 ZNF251Q9BRH9 671 aa1.56□□□□□ -2.16
SMCHD1-204ENST00000581226 UPF3BQ9BZI7 483 aaKnown RBP1.56□□□□□ -2.16
SMCHD1-204ENST00000581226 BCL2L14Q9BZR8 327 aa1.56□□□□□ -2.16
SMCHD1-204ENST00000581226 PUS1Q9Y606 427 aaKnown RBP eCLIP1.56□□□□□ -2.16
SMCHD1-204ENST00000581226 MPDZO75970 2070 aa1.55□□□□□ -2.16
SMCHD1-204ENST00000581226 PLXNA3P51805 1871 aa1.55□□□□□ -2.16
SMCHD1-204ENST00000581226 GOLGA8RI6L899 631 aa1.55□□□□□ -2.16
SMCHD1-204ENST00000581226 CALUO43852 315 aaPredicted RBP1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms