RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 Q8N2B8 174 aa10.74□□□□□ -0.69
CLK3-216ENST00000564468 UBALD1Q8TB05 177 aa10.74□□□□□ -0.69
CLK3-216ENST00000564468 GALMQ96C23 342 aa10.74□□□□□ -0.69
CLK3-216ENST00000564468 RBM14Q96PK6 669 aaKnown RBP10.74□□□□□ -0.69
CLK3-216ENST00000564468 SLC25A33Q9BSK2 321 aa10.74□□□□□ -0.69
CLK3-216ENST00000564468 KCNK15Q9H427 330 aa10.74□□□□□ -0.69
CLK3-216ENST00000564468 OR2S2Q9NQN1 319 aa10.74□□□□□ -0.69
CLK3-216ENST00000564468 JPT1Q9UK76 154 aa10.74□□□□□ -0.69
CLK3-216ENST00000564468 IFITM5A6NNB3 132 aa10.73□□□□□ -0.69
CLK3-216ENST00000564468 FAM90A9PA6NNJ1 464 aa10.73□□□□□ -0.69
CLK3-216ENST00000564468 HSD17B6O14756 317 aa10.73□□□□□ -0.69
CLK3-216ENST00000564468 SOCS1O15524 211 aa10.73□□□□□ -0.69
CLK3-216ENST00000564468 TXNL1O43396 289 aa10.73□□□□□ -0.69
CLK3-216ENST00000564468 VEGFCP49767 419 aa10.73□□□□□ -0.69
CLK3-216ENST00000564468 CLDN12P56749 244 aa10.73□□□□□ -0.69
CLK3-216ENST00000564468 HERPUD1Q15011 391 aa10.73□□□□□ -0.69
CLK3-216ENST00000564468 TREML4Q6UXN2 200 aa10.73□□□□□ -0.69
CLK3-216ENST00000564468 SLC25A48Q6ZT89 311 aaKnown RBP10.73□□□□□ -0.69
CLK3-216ENST00000564468 TPRA1Q86W33 373 aa10.73□□□□□ -0.69
CLK3-216ENST00000564468 OR1L1Q8NH94 360 aa10.73□□□□□ -0.69
CLK3-216ENST00000564468 ZNF702PQ9H963 129 aa10.73□□□□□ -0.69
CLK3-216ENST00000564468 VCX3AQ9NNX9 186 aa10.73□□□□□ -0.69
CLK3-216ENST00000564468 TXNL4BQ9NX01 149 aaKnown RBP10.73□□□□□ -0.69
CLK3-216ENST00000564468 SIGLEC9Q9Y336 463 aa10.73□□□□□ -0.69
CLK3-216ENST00000564468 TRBV6-6A0A0A6YYG2 114 aa10.72□□□□□ -0.69
CLK3-216ENST00000564468 A0A1W2PPE3 182 aa10.72□□□□□ -0.69
CLK3-216ENST00000564468 A0A1W2PPI3 338 aa10.72□□□□□ -0.69
CLK3-216ENST00000564468 METTL21EPA6NDL7 271 aa10.72□□□□□ -0.69
CLK3-216ENST00000564468 YPEL1O60688 119 aa10.72□□□□□ -0.69
CLK3-216ENST00000564468 NAPSAO96009 420 aa10.72□□□□□ -0.69
CLK3-216ENST00000564468 RAB6AP20340 208 aa10.72□□□□□ -0.69
CLK3-216ENST00000564468 GADD45AP24522 165 aa10.72□□□□□ -0.69
CLK3-216ENST00000564468 CD24P25063 80 aa10.72□□□□□ -0.69
CLK3-216ENST00000564468 KRTAP10-3P60369 221 aa10.72□□□□□ -0.69
CLK3-216ENST00000564468 MRPS15P82914 257 aaKnown RBP10.72□□□□□ -0.69
CLK3-216ENST00000564468 SRSF4Q08170 494 aaKnown RBP10.72□□□□□ -0.69
CLK3-216ENST00000564468 HES1Q14469 280 aa10.72□□□□□ -0.69
CLK3-216ENST00000564468 MORN2Q502X0 79 aa10.72□□□□□ -0.69
CLK3-216ENST00000564468 LY6G6FQ5SQ64 297 aa10.72□□□□□ -0.69
CLK3-216ENST00000564468 DRAM1Q8N682 238 aa10.72□□□□□ -0.69
CLK3-216ENST00000564468 KLHDC1Q8N7A1 406 aa10.72□□□□□ -0.69
CLK3-216ENST00000564468 OR56B4Q8NH76 319 aa10.72□□□□□ -0.69
CLK3-216ENST00000564468 SETD6Q8TBK2 473 aa10.72□□□□□ -0.69
CLK3-216ENST00000564468 YPEL2Q96QA6 119 aa10.72□□□□□ -0.69
CLK3-216ENST00000564468 A0A0A6YYD4 124 aa10.71□□□□□ -0.69
CLK3-216ENST00000564468 IGHV1-3A0A0C4DH29 117 aa10.71□□□□□ -0.69
CLK3-216ENST00000564468 TMEM272A0A1B0GTI8 110 aa10.71□□□□□ -0.69
CLK3-216ENST00000564468 NOTOA8MTQ0 251 aa10.71□□□□□ -0.69
CLK3-216ENST00000564468 LDLRAD4O15165 306 aa10.71□□□□□ -0.69
CLK3-216ENST00000564468 TNFAIP8O95379 198 aa10.71□□□□□ -0.69
CLK3-216ENST00000564468 SNRNP70P08621 437 aaKnown RBP10.71□□□□□ -0.69
CLK3-216ENST00000564468 VSIG10L2P0DP72 767 aa10.71□□□□□ -0.69
CLK3-216ENST00000564468 TMEM11P17152 192 aa10.71□□□□□ -0.69
CLK3-216ENST00000564468 VDAC2P45880 294 aaPredicted RBP10.71□□□□□ -0.69
CLK3-216ENST00000564468 ZNF137PP52743 207 aa10.71□□□□□ -0.69
CLK3-216ENST00000564468 OR10A3P58181 314 aa10.71□□□□□ -0.69
CLK3-216ENST00000564468 BLCAPP62952 87 aa10.71□□□□□ -0.69
CLK3-216ENST00000564468 ARL6IP1Q15041 203 aa10.71□□□□□ -0.69
CLK3-216ENST00000564468 HMGN3Q15651 99 aa10.71□□□□□ -0.69
CLK3-216ENST00000564468 NEDD8Q15843 81 aa10.71□□□□□ -0.69
CLK3-216ENST00000564468 ZNF880Q6PDB4 577 aa10.71□□□□□ -0.69
CLK3-216ENST00000564468 MOB3BQ86TA1 216 aa10.71□□□□□ -0.69
CLK3-216ENST00000564468 OR10V1Q8NGI7 309 aa10.71□□□□□ -0.69
CLK3-216ENST00000564468 RTN4IP1Q8WWV3 396 aaPredicted RBP10.71□□□□□ -0.69
CLK3-216ENST00000564468 CFHR4Q92496 578 aa10.71□□□□□ -0.69
CLK3-216ENST00000564468 PTX4Q96A99 478 aa10.71□□□□□ -0.69
CLK3-216ENST00000564468 KCTD7Q96MP8 289 aa10.71□□□□□ -0.69
CLK3-216ENST00000564468 CMSS1Q9BQ75 279 aaKnown RBP10.71□□□□□ -0.69
CLK3-216ENST00000564468 PECRQ9BY49 303 aa10.71□□□□□ -0.69
CLK3-216ENST00000564468 C12orf4Q9NQ89 552 aa10.71□□□□□ -0.69
CLK3-216ENST00000564468 SERTAD4Q9NUC0 356 aa10.71□□□□□ -0.69
CLK3-216ENST00000564468 AK3Q9UIJ7 227 aa10.71□□□□□ -0.69
CLK3-216ENST00000564468 MOB4Q9Y3A3 225 aa10.71□□□□□ -0.69
CLK3-216ENST00000564468 A0A087WXM4 84 aa10.7□□□□□ -0.7
CLK3-216ENST00000564468 SHISA3A0PJX4 238 aa10.7□□□□□ -0.7
CLK3-216ENST00000564468 FOXI3A8MTJ6 420 aaPredicted RBP10.7□□□□□ -0.7
CLK3-216ENST00000564468 CD1BP29016 333 aa10.7□□□□□ -0.7
CLK3-216ENST00000564468 TMEM50BP56557 158 aa10.7□□□□□ -0.7
CLK3-216ENST00000564468 DIAPH2-AS1Q14236 149 aa10.7□□□□□ -0.7
CLK3-216ENST00000564468 HABP2Q14520 560 aaPredicted RBP10.7□□□□□ -0.7
CLK3-216ENST00000564468 C2orf68Q2NKX9 166 aa10.7□□□□□ -0.7
CLK3-216ENST00000564468 TIMM50Q3ZCQ8 353 aa10.7□□□□□ -0.7
CLK3-216ENST00000564468 CT45A1Q5HYN5 189 aa10.7□□□□□ -0.7
CLK3-216ENST00000564468 TGIF2LXQ8IUE1 241 aa10.7□□□□□ -0.7
CLK3-216ENST00000564468 ZNF439Q8NDP4 499 aa10.7□□□□□ -0.7
CLK3-216ENST00000564468 OR52L2PQ8NGH6 319 aa10.7□□□□□ -0.7
CLK3-216ENST00000564468 OR2T10Q8NGZ9 312 aa10.7□□□□□ -0.7
CLK3-216ENST00000564468 CT45A3Q8NHU0 189 aa10.7□□□□□ -0.7
CLK3-216ENST00000564468 IL1F10Q8WWZ1 152 aa10.7□□□□□ -0.7
CLK3-216ENST00000564468 ST6GALNAC6Q969X2 333 aa10.7□□□□□ -0.7
CLK3-216ENST00000564468 RAB3CQ96E17 227 aa10.7□□□□□ -0.7
CLK3-216ENST00000564468 ARHGAP5-AS1Q96IT6 56 aa10.7□□□□□ -0.7
CLK3-216ENST00000564468 ABHD14AQ9BUJ0 271 aa10.7□□□□□ -0.7
CLK3-216ENST00000564468 FGF16O43320 207 aa10.69□□□□□ -0.7
CLK3-216ENST00000564468 LANCL1O43813 399 aa10.69□□□□□ -0.7
CLK3-216ENST00000564468 IGKV1D-33P01593 117 aa10.69□□□□□ -0.7
CLK3-216ENST00000564468 IGKV1-33P01594 117 aa10.69□□□□□ -0.7
CLK3-216ENST00000564468 CD3GP09693 182 aa10.69□□□□□ -0.7
CLK3-216ENST00000564468 CD36P16671 472 aa10.69□□□□□ -0.7
CLK3-216ENST00000564468 PPP1CCP36873 323 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms