RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 C5orf24Q7Z6I8 188 aa13.91□□□□□ -0.18
USB1-209ENST00000564387 OR4F5Q8NH21 305 aa13.91□□□□□ -0.18
USB1-209ENST00000564387 RAB3CQ96E17 227 aa13.91□□□□□ -0.18
USB1-209ENST00000564387 RAB18Q9NP72 206 aa13.91□□□□□ -0.18
USB1-209ENST00000564387 C12orf4Q9NQ89 552 aa13.91□□□□□ -0.18
USB1-209ENST00000564387 JPT1Q9UK76 154 aa13.91□□□□□ -0.18
USB1-209ENST00000564387 MGAT4AQ9UM21 535 aa13.91□□□□□ -0.18
USB1-209ENST00000564387 IGHV3-43A0A0B4J1X8 118 aa13.9□□□□□ -0.18
USB1-209ENST00000564387 CHST1O43916 411 aa13.9□□□□□ -0.18
USB1-209ENST00000564387 YPEL1O60688 119 aa13.9□□□□□ -0.18
USB1-209ENST00000564387 TFAP2AP05549 437 aa13.9□□□□□ -0.18
USB1-209ENST00000564387 IGHV3-43DP0DP04 118 aa13.9□□□□□ -0.18
USB1-209ENST00000564387 SNRPBP14678 240 aaKnown RBP13.9□□□□□ -0.18
USB1-209ENST00000564387 HIST1H1DP16402 221 aaKnown RBP13.9□□□□□ -0.18
USB1-209ENST00000564387 MDKP21741 143 aaPredicted RBP13.9□□□□□ -0.18
USB1-209ENST00000564387 TGFBR1P36897 503 aa13.9□□□□□ -0.18
USB1-209ENST00000564387 RPS19P39019 145 aaKnown RBP13.9□□□□□ -0.18
USB1-209ENST00000564387 ALDH3B2P48448 385 aa13.9□□□□□ -0.18
USB1-209ENST00000564387 ZNF816Q0VGE8 651 aaPredicted RBP13.9□□□□□ -0.18
USB1-209ENST00000564387 HABP2Q14520 560 aaPredicted RBP13.9□□□□□ -0.18
USB1-209ENST00000564387 LY6EQ16553 131 aa13.9□□□□□ -0.18
USB1-209ENST00000564387 CT45A1Q5HYN5 189 aa13.9□□□□□ -0.18
USB1-209ENST00000564387 OLFML2AQ68BL7 652 aa13.9□□□□□ -0.18
USB1-209ENST00000564387 CCDC144NLQ6NUI1 221 aa13.9□□□□□ -0.18
USB1-209ENST00000564387 CROCCP3Q8IVE0 287 aa13.9□□□□□ -0.18
USB1-209ENST00000564387 CT45A3Q8NHU0 189 aa13.9□□□□□ -0.18
USB1-209ENST00000564387 GALMQ96C23 342 aa13.9□□□□□ -0.18
USB1-209ENST00000564387 YPEL2Q96QA6 119 aa13.9□□□□□ -0.18
USB1-209ENST00000564387 HDHD3Q9BSH5 251 aaPredicted RBP13.9□□□□□ -0.18
USB1-209ENST00000564387 MRPS26Q9BYN8 205 aaKnown RBP13.9□□□□□ -0.18
USB1-209ENST00000564387 Q9N2K0 584 aa13.9□□□□□ -0.18
USB1-209ENST00000564387 OR2S2Q9NQN1 319 aa13.9□□□□□ -0.18
USB1-209ENST00000564387 ABCB10Q9NRK6 738 aa13.9□□□□□ -0.18
USB1-209ENST00000564387 PITPNC1Q9UKF7 332 aa13.9□□□□□ -0.18
USB1-209ENST00000564387 ETV7Q9Y603 341 aa13.9□□□□□ -0.18
USB1-209ENST00000564387 A0A1W2PPI3 338 aa13.89□□□□□ -0.19
USB1-209ENST00000564387 SERPINE3A8MV23 424 aa13.89□□□□□ -0.19
USB1-209ENST00000564387 BRS3P32247 399 aa13.89□□□□□ -0.19
USB1-209ENST00000564387 GNG10P50151 68 aa13.89□□□□□ -0.19
USB1-209ENST00000564387 RAB7AP51149 207 aa13.89□□□□□ -0.19
USB1-209ENST00000564387 ARL6IP1Q15041 203 aa13.89□□□□□ -0.19
USB1-209ENST00000564387 PLA1AQ53H76 456 aa13.89□□□□□ -0.19
USB1-209ENST00000564387 DHRS7BQ6IAN0 325 aaPredicted RBP13.89□□□□□ -0.19
USB1-209ENST00000564387 THNSL2Q86YJ6 484 aa13.89□□□□□ -0.19
USB1-209ENST00000564387 OR8H3Q8N146 312 aa13.89□□□□□ -0.19
USB1-209ENST00000564387 PRR18Q8N4B5 295 aa13.89□□□□□ -0.19
USB1-209ENST00000564387 LINC01006Q8NI28 216 aa13.89□□□□□ -0.19
USB1-209ENST00000564387 LGALS14Q8TCE9 139 aa13.89□□□□□ -0.19
USB1-209ENST00000564387 CFHR4Q92496 578 aa13.89□□□□□ -0.19
USB1-209ENST00000564387 CMSS1Q9BQ75 279 aaKnown RBP13.89□□□□□ -0.19
USB1-209ENST00000564387 ZNF747Q9BV97 191 aa13.89□□□□□ -0.19
USB1-209ENST00000564387 RANBP3Q9H6Z4 567 aaPredicted RBP13.89□□□□□ -0.19
USB1-209ENST00000564387 BEX1Q9HBH7 125 aa13.89□□□□□ -0.19
USB1-209ENST00000564387 GNG12Q9UBI6 72 aa13.89□□□□□ -0.19
USB1-209ENST00000564387 A0A1W2PPE3 182 aa13.88□□□□□ -0.19
USB1-209ENST00000564387 CLPSL1A2RUU4 121 aa13.88□□□□□ -0.19
USB1-209ENST00000564387 SLC31A2O15432 143 aa13.88□□□□□ -0.19
USB1-209ENST00000564387 SCGNO76038 276 aa13.88□□□□□ -0.19
USB1-209ENST00000564387 KIR2DS4P43632 304 aa13.88□□□□□ -0.19
USB1-209ENST00000564387 ARHGDIBP52566 201 aa13.88□□□□□ -0.19
USB1-209ENST00000564387 DIAPH2-AS1Q14236 149 aa13.88□□□□□ -0.19
USB1-209ENST00000564387 SRSF7Q16629 238 aaKnown RBP eCLIP13.88□□□□□ -0.19
USB1-209ENST00000564387 ANKRD13BQ86YJ7 626 aa13.88□□□□□ -0.19
USB1-209ENST00000564387 OR52L2PQ8NGH6 319 aa13.88□□□□□ -0.19
USB1-209ENST00000564387 OR10X1Q8NGY0 326 aa13.88□□□□□ -0.19
USB1-209ENST00000564387 TOMM40LQ969M1 308 aa13.88□□□□□ -0.19
USB1-209ENST00000564387 RPEQ96AT9 228 aa13.88□□□□□ -0.19
USB1-209ENST00000564387 SLC25A38Q96DW6 304 aa13.88□□□□□ -0.19
USB1-209ENST00000564387 ATG5Q9H1Y0 275 aa13.88□□□□□ -0.19
USB1-209ENST00000564387 CHMP1AQ9HD42 196 aaPredicted RBP13.88□□□□□ -0.19
USB1-209ENST00000564387 ABRACLQ9P1F3 81 aa13.88□□□□□ -0.19
USB1-209ENST00000564387 ITGB1BP1O14713 200 aa13.87□□□□□ -0.19
USB1-209ENST00000564387 GNB3P16520 340 aa13.87□□□□□ -0.19
USB1-209ENST00000564387 MNDAP41218 407 aa13.87□□□□□ -0.19
USB1-209ENST00000564387 HLA-DRB3P79483 266 aa13.87□□□□□ -0.19
USB1-209ENST00000564387 GNMTQ14749 295 aa13.87□□□□□ -0.19
USB1-209ENST00000564387 CTF1Q16619 201 aa13.87□□□□□ -0.19
USB1-209ENST00000564387 IDNKQ5T6J7 187 aa13.87□□□□□ -0.19
USB1-209ENST00000564387 Q6ZS49 121 aa13.87□□□□□ -0.19
USB1-209ENST00000564387 Q8N2B8 174 aa13.87□□□□□ -0.19
USB1-209ENST00000564387 OR5H6Q8NGV6 325 aa13.87□□□□□ -0.19
USB1-209ENST00000564387 TOLLIPQ9H0E2 274 aa13.87□□□□□ -0.19
USB1-209ENST00000564387 RHBDL2Q9NX52 303 aa13.87□□□□□ -0.19
USB1-209ENST00000564387 SPATA2Q9UM82 520 aa13.87□□□□□ -0.19
USB1-209ENST00000564387 A0A0A6YYH2 397 aa13.86□□□□□ -0.19
USB1-209ENST00000564387 A6NJ64 397 aa13.86□□□□□ -0.19
USB1-209ENST00000564387 RGS11O94810 467 aa13.86□□□□□ -0.19
USB1-209ENST00000564387 GABARAPO95166 117 aa13.86□□□□□ -0.19
USB1-209ENST00000564387 DIRAS3O95661 229 aa13.86□□□□□ -0.19
USB1-209ENST00000564387 GAPDHP04406 335 aaKnown RBP13.86□□□□□ -0.19
USB1-209ENST00000564387 FCGR3AP08637 254 aa13.86□□□□□ -0.19
USB1-209ENST00000564387 PPP1CCP36873 323 aaKnown RBP13.86□□□□□ -0.19
USB1-209ENST00000564387 PROK1P58294 105 aa13.86□□□□□ -0.19
USB1-209ENST00000564387 LSM3P62310 102 aaKnown RBP13.86□□□□□ -0.19
USB1-209ENST00000564387 EBI3Q14213 229 aa13.86□□□□□ -0.19
USB1-209ENST00000564387 C16orf82Q7Z2V1 217 aa13.86□□□□□ -0.19
USB1-209ENST00000564387 ODF3L1Q8IXM7 274 aa13.86□□□□□ -0.19
USB1-209ENST00000564387 C3orf56Q8N813 242 aa13.86□□□□□ -0.19
USB1-209ENST00000564387 OR10V1Q8NGI7 309 aa13.86□□□□□ -0.19
USB1-209ENST00000564387 RTN4IP1Q8WWV3 396 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms