RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 CDRT1O95170 752 aa8.13□□□□□ -1.11
CDC42BPB-207ENST00000560492 IGF1P05019 195 aa8.13□□□□□ -1.11
CDC42BPB-207ENST00000560492 OR8U9P0C7N5 309 aa8.13□□□□□ -1.11
CDC42BPB-207ENST00000560492 SERPINA2P20848 420 aa8.13□□□□□ -1.11
CDC42BPB-207ENST00000560492 CHRNA7P36544 502 aa8.13□□□□□ -1.11
CDC42BPB-207ENST00000560492 SOX2P48431 317 aa8.13□□□□□ -1.11
CDC42BPB-207ENST00000560492 CCR9P51686 369 aa8.13□□□□□ -1.11
CDC42BPB-207ENST00000560492 TMED1Q13445 227 aa8.13□□□□□ -1.11
CDC42BPB-207ENST00000560492 TTC23Q5W5X9 447 aa8.13□□□□□ -1.11
CDC42BPB-207ENST00000560492 ELP2Q6IA86 826 aa8.13□□□□□ -1.11
CDC42BPB-207ENST00000560492 TMEM104Q8NE00 496 aa8.13□□□□□ -1.11
CDC42BPB-207ENST00000560492 PXT1Q8NFP0 134 aa8.13□□□□□ -1.11
CDC42BPB-207ENST00000560492 OR52M1Q8NGK5 317 aa8.13□□□□□ -1.11
CDC42BPB-207ENST00000560492 CASTOR1Q8WTX7 329 aa8.13□□□□□ -1.11
CDC42BPB-207ENST00000560492 ZNF251Q9BRH9 671 aa8.13□□□□□ -1.11
CDC42BPB-207ENST00000560492 RAB9BQ9NP90 201 aa8.13□□□□□ -1.11
CDC42BPB-207ENST00000560492 TRAPPC2LQ9UL33 140 aa8.13□□□□□ -1.11
CDC42BPB-207ENST00000560492 ERGIC3Q9Y282 383 aa8.13□□□□□ -1.11
CDC42BPB-207ENST00000560492 OR4C45A6NMZ5 311 aa8.12□□□□□ -1.11
CDC42BPB-207ENST00000560492 SPINT2O43291 252 aa8.12□□□□□ -1.11
CDC42BPB-207ENST00000560492 DENRO43583 198 aaKnown RBP8.12□□□□□ -1.11
CDC42BPB-207ENST00000560492 IFNA6P05013 189 aa8.12□□□□□ -1.11
CDC42BPB-207ENST00000560492 RPSAP08865 295 aaKnown RBP8.12□□□□□ -1.11
CDC42BPB-207ENST00000560492 IGHV4-30-4P0DP06 118 aa8.12□□□□□ -1.11
CDC42BPB-207ENST00000560492 BLVRBP30043 206 aaPredicted RBP8.12□□□□□ -1.11
CDC42BPB-207ENST00000560492 POLR2IP36954 125 aaKnown RBP8.12□□□□□ -1.11
CDC42BPB-207ENST00000560492 RAB9AP51151 201 aa8.12□□□□□ -1.11
CDC42BPB-207ENST00000560492 RUNX1Q01196 453 aa8.12□□□□□ -1.11
CDC42BPB-207ENST00000560492 PLGLAQ15195 96 aa8.12□□□□□ -1.11
CDC42BPB-207ENST00000560492 FDX2Q6P4F2 183 aa8.12□□□□□ -1.11
CDC42BPB-207ENST00000560492 HAPLN4Q86UW8 402 aa8.12□□□□□ -1.11
CDC42BPB-207ENST00000560492 ANKRD13BQ86YJ7 626 aa8.12□□□□□ -1.11
CDC42BPB-207ENST00000560492 LINC00311Q8N616 119 aa8.12□□□□□ -1.11
CDC42BPB-207ENST00000560492 SETD9Q8NE22 299 aa8.12□□□□□ -1.11
CDC42BPB-207ENST00000560492 OR52N1Q8NH53 320 aa8.12□□□□□ -1.11
CDC42BPB-207ENST00000560492 OR5AK2Q8NH90 309 aa8.12□□□□□ -1.11
CDC42BPB-207ENST00000560492 PELI1Q96FA3 418 aa8.12□□□□□ -1.11
CDC42BPB-207ENST00000560492 TM2D3Q9BRN9 247 aa8.12□□□□□ -1.11
CDC42BPB-207ENST00000560492 CHCHD6Q9BRQ6 235 aa8.12□□□□□ -1.11
CDC42BPB-207ENST00000560492 ELOVL1Q9BW60 279 aa8.12□□□□□ -1.11
CDC42BPB-207ENST00000560492 ANKRD60Q9BZ19 345 aa8.12□□□□□ -1.11
CDC42BPB-207ENST00000560492 METTL9Q9H1A3 318 aa8.12□□□□□ -1.11
CDC42BPB-207ENST00000560492 ZNF581Q9P0T4 197 aa8.12□□□□□ -1.11
CDC42BPB-207ENST00000560492 KIAA1456Q9P272 454 aa8.12□□□□□ -1.11
CDC42BPB-207ENST00000560492 MRPS28Q9Y2Q9 187 aaKnown RBP8.12□□□□□ -1.11
CDC42BPB-207ENST00000560492 GMPPBQ9Y5P6 360 aa8.12□□□□□ -1.11
CDC42BPB-207ENST00000560492 IGHV4OR15-8A0A075B7B6 117 aa8.11□□□□□ -1.11
CDC42BPB-207ENST00000560492 A0A087WW49 117 aa8.11□□□□□ -1.11
CDC42BPB-207ENST00000560492 LOC100130705A0A1B0GUX0 176 aa8.11□□□□□ -1.11
CDC42BPB-207ENST00000560492 C15orf65H3BRN8 121 aa8.11□□□□□ -1.11
CDC42BPB-207ENST00000560492 GEMIN2O14893 280 aaKnown RBP8.11□□□□□ -1.11
CDC42BPB-207ENST00000560492 IGHV3-11P01762 117 aa8.11□□□□□ -1.11
CDC42BPB-207ENST00000560492 ARSBP15848 533 aa8.11□□□□□ -1.11
CDC42BPB-207ENST00000560492 CNTFRP26992 372 aa8.11□□□□□ -1.11
CDC42BPB-207ENST00000560492 PPIFP30405 207 aaKnown RBP8.11□□□□□ -1.11
CDC42BPB-207ENST00000560492 RBM11P57052 281 aaKnown RBP8.11□□□□□ -1.11
CDC42BPB-207ENST00000560492 ACTBP60709 375 aa8.11□□□□□ -1.11
CDC42BPB-207ENST00000560492 TNP2Q05952 138 aa8.11□□□□□ -1.11
CDC42BPB-207ENST00000560492 LSAMPQ13449 338 aa8.11□□□□□ -1.11
CDC42BPB-207ENST00000560492 ACSM6Q6P461 480 aa8.11□□□□□ -1.11
CDC42BPB-207ENST00000560492 SLC25A48Q6ZT89 311 aaKnown RBP8.11□□□□□ -1.11
CDC42BPB-207ENST00000560492 LHFPL3Q86UP9 236 aa8.11□□□□□ -1.11
CDC42BPB-207ENST00000560492 C8orf59Q8N0T1 100 aaPredicted RBP8.11□□□□□ -1.11
CDC42BPB-207ENST00000560492 ACBD7Q8N6N7 88 aa8.11□□□□□ -1.11
CDC42BPB-207ENST00000560492 OR51A2Q8NGJ7 313 aa8.11□□□□□ -1.11
CDC42BPB-207ENST00000560492 OR4K15Q8NH41 348 aa8.11□□□□□ -1.11
CDC42BPB-207ENST00000560492 MYOZ3Q8TDC0 251 aa8.11□□□□□ -1.11
CDC42BPB-207ENST00000560492 MYCBPQ99417 103 aaPredicted RBP8.11□□□□□ -1.11
CDC42BPB-207ENST00000560492 PDCD1LG2Q9BQ51 273 aa8.11□□□□□ -1.11
CDC42BPB-207ENST00000560492 SPATA25Q9BR10 227 aa8.11□□□□□ -1.11
CDC42BPB-207ENST00000560492 ALG8Q9BVK2 526 aa8.11□□□□□ -1.11
CDC42BPB-207ENST00000560492 GABARAPL3Q9BY60 117 aa8.11□□□□□ -1.11
CDC42BPB-207ENST00000560492 TUBA4BQ9H853 241 aa8.11□□□□□ -1.11
CDC42BPB-207ENST00000560492 TAS2R4Q9NYW5 299 aa8.11□□□□□ -1.11
CDC42BPB-207ENST00000560492 DNAH7Q8WXX0 4024 aa8.11□□□□□ -1.11
CDC42BPB-207ENST00000560492 TMEM212A6NML5 194 aa8.1□□□□□ -1.11
CDC42BPB-207ENST00000560492 NBR2O15453 112 aa8.1□□□□□ -1.11
CDC42BPB-207ENST00000560492 ORC5O43913 435 aa8.1□□□□□ -1.11
CDC42BPB-207ENST00000560492 IGLV1-40P01703 118 aa8.1□□□□□ -1.11
CDC42BPB-207ENST00000560492 HLA-DRB1P01911 266 aa8.1□□□□□ -1.11
CDC42BPB-207ENST00000560492 CD2P06729 351 aa8.1□□□□□ -1.11
CDC42BPB-207ENST00000560492 LGALS1P09382 135 aaKnown RBP8.1□□□□□ -1.11
CDC42BPB-207ENST00000560492 PPP3R1P63098 170 aa8.1□□□□□ -1.11
CDC42BPB-207ENST00000560492 ADARB1P78563 741 aaKnown RBP8.1□□□□□ -1.11
CDC42BPB-207ENST00000560492 PAX5Q02548 391 aa8.1□□□□□ -1.11
CDC42BPB-207ENST00000560492 GALEQ14376 348 aa8.1□□□□□ -1.11
CDC42BPB-207ENST00000560492 SLC22A6Q4U2R8 563 aa8.1□□□□□ -1.11
CDC42BPB-207ENST00000560492 C6orf183Q5T699 404 aa8.1□□□□□ -1.11
CDC42BPB-207ENST00000560492 SYT6Q5T7P8 510 aaPredicted RBP8.1□□□□□ -1.11
CDC42BPB-207ENST00000560492 DDI2Q5TDH0 399 aa8.1□□□□□ -1.11
CDC42BPB-207ENST00000560492 LIN54Q6MZP7 749 aa8.1□□□□□ -1.11
CDC42BPB-207ENST00000560492 PARP16Q8N5Y8 322 aa8.1□□□□□ -1.11
CDC42BPB-207ENST00000560492 C8orf31Q8N9H6 132 aa8.1□□□□□ -1.11
CDC42BPB-207ENST00000560492 FLYWCH2Q96CP2 140 aaKnown RBP8.1□□□□□ -1.11
CDC42BPB-207ENST00000560492 TMED9Q9BVK6 235 aa8.1□□□□□ -1.11
CDC42BPB-207ENST00000560492 CST11Q9H112 138 aa8.1□□□□□ -1.11
CDC42BPB-207ENST00000560492 EDA2RQ9HAV5 297 aa8.1□□□□□ -1.11
CDC42BPB-207ENST00000560492 PAK1IP1Q9NWT1 392 aaPredicted RBP8.1□□□□□ -1.11
CDC42BPB-207ENST00000560492 ZNF580Q9UK33 172 aa8.1□□□□□ -1.11
CDC42BPB-207ENST00000560492 FOXA2Q9Y261 457 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms