RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 SLC22A1O15245 554 aa13.44□□□□□ -0.26
LRRC28-210ENST00000558879 RPS27AP62979 156 aaKnown RBP13.44□□□□□ -0.26
LRRC28-210ENST00000558879 QRFPP83859 136 aa13.44□□□□□ -0.26
LRRC28-210ENST00000558879 HNF4GQ14541 408 aa13.44□□□□□ -0.26
LRRC28-210ENST00000558879 HSD17B12Q53GQ0 312 aa13.44□□□□□ -0.26
LRRC28-210ENST00000558879 GLT8D1Q68CQ7 371 aa13.44□□□□□ -0.26
LRRC28-210ENST00000558879 REC114Q7Z4M0 266 aa13.44□□□□□ -0.26
LRRC28-210ENST00000558879 OR10V1Q8NGI7 309 aa13.44□□□□□ -0.26
LRRC28-210ENST00000558879 OR2T10Q8NGZ9 312 aa13.44□□□□□ -0.26
LRRC28-210ENST00000558879 CHPT1Q8WUD6 406 aa13.44□□□□□ -0.26
LRRC28-210ENST00000558879 UFD1Q92890 307 aa13.44□□□□□ -0.26
LRRC28-210ENST00000558879 NOL4LQ96MY1 436 aaPredicted RBP13.44□□□□□ -0.26
LRRC28-210ENST00000558879 SULT4A1Q9BR01 284 aa13.44□□□□□ -0.26
LRRC28-210ENST00000558879 TMEM59Q9BXS4 323 aa13.44□□□□□ -0.26
LRRC28-210ENST00000558879 KCNK15Q9H427 330 aa13.44□□□□□ -0.26
LRRC28-210ENST00000558879 ISYNA1Q9NPH2 558 aa13.44□□□□□ -0.26
LRRC28-210ENST00000558879 LIN7CQ9NUP9 197 aaKnown RBP13.44□□□□□ -0.26
LRRC28-210ENST00000558879 JPT1Q9UK76 154 aa13.44□□□□□ -0.26
LRRC28-210ENST00000558879 TPRKBQ9Y3C4 175 aa13.44□□□□□ -0.26
LRRC28-210ENST00000558879 SRMP19623 302 aa13.43□□□□□ -0.26
LRRC28-210ENST00000558879 HTD2P86397 168 aa13.43□□□□□ -0.26
LRRC28-210ENST00000558879 TPBGQ13641 420 aa13.43□□□□□ -0.26
LRRC28-210ENST00000558879 GNMTQ14749 295 aa13.43□□□□□ -0.26
LRRC28-210ENST00000558879 HMGN3Q15651 99 aa13.43□□□□□ -0.26
LRRC28-210ENST00000558879 MORN2Q502X0 79 aa13.43□□□□□ -0.26
LRRC28-210ENST00000558879 LIPKQ5VXJ0 399 aa13.43□□□□□ -0.26
LRRC28-210ENST00000558879 STEAP3Q658P3 488 aa13.43□□□□□ -0.26
LRRC28-210ENST00000558879 OR10K2Q6IF99 312 aa13.43□□□□□ -0.26
LRRC28-210ENST00000558879 ETV3LQ6ZN32 361 aa13.43□□□□□ -0.26
LRRC28-210ENST00000558879 TMEM91Q6ZNR0 172 aa13.43□□□□□ -0.26
LRRC28-210ENST00000558879 Q6ZPA2 131 aa13.43□□□□□ -0.26
LRRC28-210ENST00000558879 SLC35E3Q7Z769 313 aa13.43□□□□□ -0.26
LRRC28-210ENST00000558879 PRR18Q8N4B5 295 aa13.43□□□□□ -0.26
LRRC28-210ENST00000558879 GFI1Q99684 422 aa13.43□□□□□ -0.26
LRRC28-210ENST00000558879 NICN1Q9BSH3 213 aa13.43□□□□□ -0.26
LRRC28-210ENST00000558879 ABCG5Q9H222 651 aa13.43□□□□□ -0.26
LRRC28-210ENST00000558879 ZNF736B4DX44 427 aaPredicted RBP13.42□□□□□ -0.26
LRRC28-210ENST00000558879 LANCL1O43813 399 aa13.42□□□□□ -0.26
LRRC28-210ENST00000558879 MOSP00540 346 aa13.42□□□□□ -0.26
LRRC28-210ENST00000558879 PRB2P02812 416 aaPredicted RBP13.42□□□□□ -0.26
LRRC28-210ENST00000558879 CD33P20138 364 aa13.42□□□□□ -0.26
LRRC28-210ENST00000558879 CRHBPP24387 322 aa13.42□□□□□ -0.26
LRRC28-210ENST00000558879 HTR2CP28335 458 aa13.42□□□□□ -0.26
LRRC28-210ENST00000558879 NKAPLQ5M9Q1 402 aa13.42□□□□□ -0.26
LRRC28-210ENST00000558879 LY6G6FQ5SQ64 297 aa13.42□□□□□ -0.26
LRRC28-210ENST00000558879 CEACAM19Q7Z692 300 aa13.42□□□□□ -0.26
LRRC28-210ENST00000558879 C5orf24Q7Z6I8 188 aa13.42□□□□□ -0.26
LRRC28-210ENST00000558879 ZNF329Q86UD4 541 aa13.42□□□□□ -0.26
LRRC28-210ENST00000558879 ODF3L1Q8IXM7 274 aa13.42□□□□□ -0.26
LRRC28-210ENST00000558879 STPG2Q8N412 459 aa13.42□□□□□ -0.26
LRRC28-210ENST00000558879 FAM71E2Q8N5Q1 922 aa13.42□□□□□ -0.26
LRRC28-210ENST00000558879 OR6M1Q8NGM8 313 aa13.42□□□□□ -0.26
LRRC28-210ENST00000558879 ABHD14AQ9BUJ0 271 aa13.42□□□□□ -0.26
LRRC28-210ENST00000558879 PLSCR3Q9NRY6 295 aa13.42□□□□□ -0.26
LRRC28-210ENST00000558879 A0A0A6YYD4 124 aa13.41□□□□□ -0.26
LRRC28-210ENST00000558879 SERPINE3A8MV23 424 aa13.41□□□□□ -0.26
LRRC28-210ENST00000558879 RGS10O43665 173 aa13.41□□□□□ -0.26
LRRC28-210ENST00000558879 BPNT1O95861 308 aa13.41□□□□□ -0.26
LRRC28-210ENST00000558879 NAPSAO96009 420 aa13.41□□□□□ -0.26
LRRC28-210ENST00000558879 PF4P02776 101 aa13.41□□□□□ -0.26
LRRC28-210ENST00000558879 CPEP16870 476 aa13.41□□□□□ -0.26
LRRC28-210ENST00000558879 GPR12P47775 334 aa13.41□□□□□ -0.26
LRRC28-210ENST00000558879 RPL23AP62750 156 aaKnown RBP13.41□□□□□ -0.26
LRRC28-210ENST00000558879 RPS25P62851 125 aaKnown RBP13.41□□□□□ -0.26
LRRC28-210ENST00000558879 MLLT11Q13015 90 aaPredicted RBP13.41□□□□□ -0.26
LRRC28-210ENST00000558879 LSAMPQ13449 338 aa13.41□□□□□ -0.26
LRRC28-210ENST00000558879 KHDC1LQ5JSQ8 128 aa13.41□□□□□ -0.26
LRRC28-210ENST00000558879 ZNF880Q6PDB4 577 aa13.41□□□□□ -0.26
LRRC28-210ENST00000558879 PRSS48Q7RTY5 328 aa13.41□□□□□ -0.26
LRRC28-210ENST00000558879 C6orf201Q7Z4U5 140 aa13.41□□□□□ -0.26
LRRC28-210ENST00000558879 FOXRED2Q8IWF2 684 aa13.41□□□□□ -0.26
LRRC28-210ENST00000558879 SVOPQ8N4V2 548 aa13.41□□□□□ -0.26
LRRC28-210ENST00000558879 KCNG3Q8TAE7 436 aa13.41□□□□□ -0.26
LRRC28-210ENST00000558879 NEDD4LQ96PU5 975 aa13.41□□□□□ -0.26
LRRC28-210ENST00000558879 OR2S2Q9NQN1 319 aa13.41□□□□□ -0.26
LRRC28-210ENST00000558879 NECAP2Q9NVZ3 263 aa13.41□□□□□ -0.26
LRRC28-210ENST00000558879 KCNIP1Q9NZI2 227 aa13.41□□□□□ -0.26
LRRC28-210ENST00000558879 LINC00527Q9UJ94 153 aa13.41□□□□□ -0.26
LRRC28-210ENST00000558879 LINC01548A6NM66 108 aa13.4□□□□□ -0.26
LRRC28-210ENST00000558879 AP4M1O00189 453 aa13.4□□□□□ -0.26
LRRC28-210ENST00000558879 SLC17A2O00624 439 aa13.4□□□□□ -0.26
LRRC28-210ENST00000558879 YPEL1O60688 119 aa13.4□□□□□ -0.26
LRRC28-210ENST00000558879 IGLL1P15814 213 aa13.4□□□□□ -0.26
LRRC28-210ENST00000558879 PSMA1P25786 263 aaKnown RBP13.4□□□□□ -0.26
LRRC28-210ENST00000558879 TRAM1Q15629 374 aa13.4□□□□□ -0.26
LRRC28-210ENST00000558879 FOXB2Q5VYV0 432 aa13.4□□□□□ -0.26
LRRC28-210ENST00000558879 COMMD1Q8N668 190 aa13.4□□□□□ -0.26
LRRC28-210ENST00000558879 LINC00482Q8N8I6 264 aa13.4□□□□□ -0.26
LRRC28-210ENST00000558879 OR8H1Q8NGG4 311 aa13.4□□□□□ -0.26
LRRC28-210ENST00000558879 OR52L2PQ8NGH6 319 aa13.4□□□□□ -0.26
LRRC28-210ENST00000558879 TMEM203Q969S6 136 aa13.4□□□□□ -0.26
LRRC28-210ENST00000558879 YPEL2Q96QA6 119 aa13.4□□□□□ -0.26
LRRC28-210ENST00000558879 S1PR3Q99500 378 aa13.4□□□□□ -0.26
LRRC28-210ENST00000558879 LPAR5Q9H1C0 372 aa13.4□□□□□ -0.26
LRRC28-210ENST00000558879 AURKAIP1Q9NWT8 199 aaPredicted RBP13.4□□□□□ -0.26
LRRC28-210ENST00000558879 NCBP2LA6PVI3 153 aaKnown RBP13.39□□□□□ -0.27
LRRC28-210ENST00000558879 FOXI3A8MTJ6 420 aaPredicted RBP13.39□□□□□ -0.27
LRRC28-210ENST00000558879 SLC6A1P30531 599 aa13.39□□□□□ -0.27
LRRC28-210ENST00000558879 PPP1CCP36873 323 aaKnown RBP13.39□□□□□ -0.27
LRRC28-210ENST00000558879 TBCEQ15813 527 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms