RNA–Protein interactions for RNA: ENST00000558795.1

CPNE6-208, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 1,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-208ENST00000558795 FAM90A14PP0C7W9 464 aa12.17□□□□□ -0.46
CPNE6-208ENST00000558795 FAM90A24PP0C7X0 464 aa12.17□□□□□ -0.46
CPNE6-208ENST00000558795 DUSP1P28562 367 aa12.17□□□□□ -0.46
CPNE6-208ENST00000558795 SOX6P35712 828 aa12.17□□□□□ -0.46
CPNE6-208ENST00000558795 CEACAM3P40198 252 aa12.17□□□□□ -0.46
CPNE6-208ENST00000558795 THBS3P49746 956 aa12.17□□□□□ -0.46
CPNE6-208ENST00000558795 SCN1BQ07699 218 aa12.17□□□□□ -0.46
CPNE6-208ENST00000558795 PIGYQ3MUY2 71 aa12.17□□□□□ -0.46
CPNE6-208ENST00000558795 OR52W1Q6IF63 320 aa12.17□□□□□ -0.46
CPNE6-208ENST00000558795 RTN4RL2Q86UN3 420 aa12.17□□□□□ -0.46
CPNE6-208ENST00000558795 TMEM104Q8NE00 496 aa12.17□□□□□ -0.46
CPNE6-208ENST00000558795 FAM46BQ96A09 425 aa12.17□□□□□ -0.46
CPNE6-208ENST00000558795 PTX4Q96A99 478 aa12.17□□□□□ -0.46
CPNE6-208ENST00000558795 KCTD12Q96CX2 325 aaKnown RBP12.17□□□□□ -0.46
CPNE6-208ENST00000558795 DGCR14Q96DF8 476 aaKnown RBP12.17□□□□□ -0.46
CPNE6-208ENST00000558795 GAL3ST2Q9H3Q3 398 aa12.17□□□□□ -0.46
CPNE6-208ENST00000558795 IFT22Q9H7X7 185 aa12.17□□□□□ -0.46
CPNE6-208ENST00000558795 UBE2J1Q9Y385 318 aaPredicted RBP12.17□□□□□ -0.46
CPNE6-208ENST00000558795 TMEM272A0A1B0GTI8 110 aa12.16□□□□□ -0.46
CPNE6-208ENST00000558795 MGST3O14880 152 aa12.16□□□□□ -0.46
CPNE6-208ENST00000558795 GEMIN2O14893 280 aaKnown RBP12.16□□□□□ -0.46
CPNE6-208ENST00000558795 MMP23AO75900 390 aa12.16□□□□□ -0.46
CPNE6-208ENST00000558795 OR7C1O76099 320 aaPredicted RBP12.16□□□□□ -0.46
CPNE6-208ENST00000558795 OR2H2O95918 312 aa12.16□□□□□ -0.46
CPNE6-208ENST00000558795 AMY1AP04745 511 aa12.16□□□□□ -0.46
CPNE6-208ENST00000558795 AMY2AP04746 511 aa12.16□□□□□ -0.46
CPNE6-208ENST00000558795 ZNF44P15621 663 aa12.16□□□□□ -0.46
CPNE6-208ENST00000558795 RAB6AP20340 208 aa12.16□□□□□ -0.46
CPNE6-208ENST00000558795 RPL23AP62750 156 aaKnown RBP12.16□□□□□ -0.46
CPNE6-208ENST00000558795 RPS27AP62979 156 aaKnown RBP12.16□□□□□ -0.46
CPNE6-208ENST00000558795 UNC119Q13432 240 aa12.16□□□□□ -0.46
CPNE6-208ENST00000558795 SPCS2Q15005 226 aa12.16□□□□□ -0.46
CPNE6-208ENST00000558795 PRAMEF5Q5TYX0 476 aa12.16□□□□□ -0.46
CPNE6-208ENST00000558795 OR10K2Q6IF99 312 aa12.16□□□□□ -0.46
CPNE6-208ENST00000558795 C8orf86Q6ZUL3 223 aa12.16□□□□□ -0.46
CPNE6-208ENST00000558795 ACOT12Q8WYK0 555 aa12.16□□□□□ -0.46
CPNE6-208ENST00000558795 AP3S1Q92572 193 aa12.16□□□□□ -0.46
CPNE6-208ENST00000558795 CREB3L1Q96BA8 519 aa12.16□□□□□ -0.46
CPNE6-208ENST00000558795 Q96M66 194 aa12.16□□□□□ -0.46
CPNE6-208ENST00000558795 TM2D1Q9BX74 207 aa12.16□□□□□ -0.46
CPNE6-208ENST00000558795 SPACA1Q9HBV2 294 aa12.16□□□□□ -0.46
CPNE6-208ENST00000558795 ETV7Q9Y603 341 aa12.16□□□□□ -0.46
CPNE6-208ENST00000558795 A0A0B4J203 849 aa12.15□□□□□ -0.46
CPNE6-208ENST00000558795 METTL21EPA6NDL7 271 aa12.15□□□□□ -0.46
CPNE6-208ENST00000558795 C3orf84H3BNL1 204 aa12.15□□□□□ -0.46
CPNE6-208ENST00000558795 TOR1AO14656 332 aa12.15□□□□□ -0.46
CPNE6-208ENST00000558795 LDLRAD4O15165 306 aa12.15□□□□□ -0.46
CPNE6-208ENST00000558795 RAMP3O60896 148 aa12.15□□□□□ -0.46
CPNE6-208ENST00000558795 SNRPBP14678 240 aaKnown RBP12.15□□□□□ -0.46
CPNE6-208ENST00000558795 ZNF182P17025 639 aaPredicted RBP12.15□□□□□ -0.46
CPNE6-208ENST00000558795 SLC6A1P30531 599 aa12.15□□□□□ -0.46
CPNE6-208ENST00000558795 MYCNOSP40205 109 aa12.15□□□□□ -0.46
CPNE6-208ENST00000558795 MNDAP41218 407 aa12.15□□□□□ -0.46
CPNE6-208ENST00000558795 CCDC144NLQ6NUI1 221 aa12.15□□□□□ -0.46
CPNE6-208ENST00000558795 Q6P435 159 aa12.15□□□□□ -0.46
CPNE6-208ENST00000558795 BAIAP2L2Q6UXY1 529 aa12.15□□□□□ -0.46
CPNE6-208ENST00000558795 ZNF329Q86UD4 541 aa12.15□□□□□ -0.46
CPNE6-208ENST00000558795 KLHL30-AS1Q8NEE0 82 aa12.15□□□□□ -0.46
CPNE6-208ENST00000558795 BARHL1Q9BZE3 327 aa12.15□□□□□ -0.46
CPNE6-208ENST00000558795 BATF3Q9NR55 127 aa12.15□□□□□ -0.46
CPNE6-208ENST00000558795 SPATA2Q9UM82 520 aa12.15□□□□□ -0.46
CPNE6-208ENST00000558795 MOB4Q9Y3A3 225 aa12.15□□□□□ -0.46
CPNE6-208ENST00000558795 TRGV10A0A0A0MS01 117 aa12.14□□□□□ -0.47
CPNE6-208ENST00000558795 FAM172BPA6NC97 362 aa12.14□□□□□ -0.47
CPNE6-208ENST00000558795 SIRPB1O00241 398 aa12.14□□□□□ -0.47
CPNE6-208ENST00000558795 PSPNO60542 156 aa12.14□□□□□ -0.47
CPNE6-208ENST00000558795 CDK2P24941 298 aa12.14□□□□□ -0.47
CPNE6-208ENST00000558795 P2RX3P56373 397 aa12.14□□□□□ -0.47
CPNE6-208ENST00000558795 ATAD3CQ5T2N8 411 aa12.14□□□□□ -0.47
CPNE6-208ENST00000558795 TPTE2P1Q5T6R2 138 aa12.14□□□□□ -0.47
CPNE6-208ENST00000558795 MZT2AQ6P582 158 aa12.14□□□□□ -0.47
CPNE6-208ENST00000558795 HEPN1Q6WQI6 88 aa12.14□□□□□ -0.47
CPNE6-208ENST00000558795 FAM89BQ8N5H3 189 aa12.14□□□□□ -0.47
CPNE6-208ENST00000558795 LGALS14Q8TCE9 139 aa12.14□□□□□ -0.47
CPNE6-208ENST00000558795 DYNC2LI1Q8TCX1 351 aa12.14□□□□□ -0.47
CPNE6-208ENST00000558795 LPAR5Q9H1C0 372 aa12.14□□□□□ -0.47
CPNE6-208ENST00000558795 KCNK15Q9H427 330 aa12.14□□□□□ -0.47
CPNE6-208ENST00000558795 ZFP57Q9NU63 452 aa12.14□□□□□ -0.47
CPNE6-208ENST00000558795 MCRIP1C9JLW8 97 aa12.13□□□□□ -0.47
CPNE6-208ENST00000558795 SLC33A1O00400 549 aaPredicted RBP12.13□□□□□ -0.47
CPNE6-208ENST00000558795 SCGNO76038 276 aa12.13□□□□□ -0.47
CPNE6-208ENST00000558795 IGLV1-47P01700 117 aa12.13□□□□□ -0.47
CPNE6-208ENST00000558795 GLAP06280 429 aa12.13□□□□□ -0.47
CPNE6-208ENST00000558795 FAM106CPP0CH98 169 aa12.13□□□□□ -0.47
CPNE6-208ENST00000558795 FUT3P21217 361 aa12.13□□□□□ -0.47
CPNE6-208ENST00000558795 ERP29P30040 261 aaKnown RBP12.13□□□□□ -0.47
CPNE6-208ENST00000558795 KCNJ3P48549 501 aa12.13□□□□□ -0.47
CPNE6-208ENST00000558795 PRRX1P54821 245 aa12.13□□□□□ -0.47
CPNE6-208ENST00000558795 RAB25P57735 213 aa12.13□□□□□ -0.47
CPNE6-208ENST00000558795 RBM39Q14498 530 aaKnown RBP12.13□□□□□ -0.47
CPNE6-208ENST00000558795 HLA-DRB5Q30154 266 aa12.13□□□□□ -0.47
CPNE6-208ENST00000558795 PAN3Q58A45 887 aaKnown RBP12.13□□□□□ -0.47
CPNE6-208ENST00000558795 C18orf65Q6ZTR6 163 aa12.13□□□□□ -0.47
CPNE6-208ENST00000558795 OR56B1Q8NGI3 324 aa12.13□□□□□ -0.47
CPNE6-208ENST00000558795 CHPT1Q8WUD6 406 aa12.13□□□□□ -0.47
CPNE6-208ENST00000558795 NEDD4LQ96PU5 975 aa12.13□□□□□ -0.47
CPNE6-208ENST00000558795 P2RX4Q99571 388 aa12.13□□□□□ -0.47
CPNE6-208ENST00000558795 CCDC59Q9P031 241 aaKnown RBP12.13□□□□□ -0.47
CPNE6-208ENST00000558795 DNAH9Q9NYC9 4486 aa12.13□□□□□ -0.47
CPNE6-208ENST00000558795 TRAV24A0A0B4J272 114 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms