RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 MOB1BQ7L9L4 216 aa6.82□□□□□ -1.32
TPM1-213ENST00000558400 C6orf201Q7Z4U5 140 aa6.82□□□□□ -1.32
TPM1-213ENST00000558400 TOMM40LQ969M1 308 aa6.82□□□□□ -1.32
TPM1-213ENST00000558400 KCTD7Q96MP8 289 aa6.82□□□□□ -1.32
TPM1-213ENST00000558400 GFI1Q99684 422 aa6.82□□□□□ -1.32
TPM1-213ENST00000558400 SULT4A1Q9BR01 284 aa6.82□□□□□ -1.32
TPM1-213ENST00000558400 GHITMQ9H3K2 345 aa6.82□□□□□ -1.32
TPM1-213ENST00000558400 ZNF696Q9H7X3 374 aa6.82□□□□□ -1.32
TPM1-213ENST00000558400 LIN7BQ9HAP6 207 aa6.82□□□□□ -1.32
TPM1-213ENST00000558400 OR2S2Q9NQN1 319 aa6.82□□□□□ -1.32
TPM1-213ENST00000558400 TXNL4BQ9NX01 149 aaKnown RBP6.82□□□□□ -1.32
TPM1-213ENST00000558400 FAM172BPA6NC97 362 aa6.81□□□□□ -1.32
TPM1-213ENST00000558400 FAM90A9PA6NNJ1 464 aa6.81□□□□□ -1.32
TPM1-213ENST00000558400 NOTOA8MTQ0 251 aa6.81□□□□□ -1.32
TPM1-213ENST00000558400 LDLRAD4O15165 306 aa6.81□□□□□ -1.32
TPM1-213ENST00000558400 SOCS1O15524 211 aa6.81□□□□□ -1.32
TPM1-213ENST00000558400 TXNL1O43396 289 aa6.81□□□□□ -1.32
TPM1-213ENST00000558400 YPEL1O60688 119 aa6.81□□□□□ -1.32
TPM1-213ENST00000558400 SCGNO76038 276 aa6.81□□□□□ -1.32
TPM1-213ENST00000558400 NAPSAO96009 420 aa6.81□□□□□ -1.32
TPM1-213ENST00000558400 CD36P16671 472 aa6.81□□□□□ -1.32
TPM1-213ENST00000558400 VEGFCP49767 419 aa6.81□□□□□ -1.32
TPM1-213ENST00000558400 TMEM50BP56557 158 aa6.81□□□□□ -1.32
TPM1-213ENST00000558400 ZNF816Q0VGE8 651 aaPredicted RBP6.81□□□□□ -1.32
TPM1-213ENST00000558400 MORN2Q502X0 79 aa6.81□□□□□ -1.32
TPM1-213ENST00000558400 HES5Q5TA89 166 aa6.81□□□□□ -1.32
TPM1-213ENST00000558400 CCBE1Q6UXH8 406 aaPredicted RBP6.81□□□□□ -1.32
TPM1-213ENST00000558400 SLC25A48Q6ZT89 311 aaKnown RBP6.81□□□□□ -1.32
TPM1-213ENST00000558400 Q8N2B8 174 aa6.81□□□□□ -1.32
TPM1-213ENST00000558400 TSPAN14Q8NG11 270 aa6.81□□□□□ -1.32
TPM1-213ENST00000558400 MRPL30Q8TCC3 161 aaKnown RBP6.81□□□□□ -1.32
TPM1-213ENST00000558400 WFDC12Q8WWY7 111 aa6.81□□□□□ -1.32
TPM1-213ENST00000558400 TAF15Q92804 592 aaKnown RBP eCLIP6.81□□□□□ -1.32
TPM1-213ENST00000558400 RBM14Q96PK6 669 aaKnown RBP6.81□□□□□ -1.32
TPM1-213ENST00000558400 YPEL2Q96QA6 119 aa6.81□□□□□ -1.32
TPM1-213ENST00000558400 CITED1Q99966 193 aa6.81□□□□□ -1.32
TPM1-213ENST00000558400 NICN1Q9BSH3 213 aa6.81□□□□□ -1.32
TPM1-213ENST00000558400 CHMP1AQ9HD42 196 aaPredicted RBP6.81□□□□□ -1.32
TPM1-213ENST00000558400 JPT1Q9UK76 154 aa6.81□□□□□ -1.32
TPM1-213ENST00000558400 TMEM272A0A1B0GTI8 110 aa6.8□□□□□ -1.32
TPM1-213ENST00000558400 CHST1O43916 411 aa6.8□□□□□ -1.32
TPM1-213ENST00000558400 PEX14O75381 377 aa6.8□□□□□ -1.32
TPM1-213ENST00000558400 OR2F2O95006 317 aa6.8□□□□□ -1.32
TPM1-213ENST00000558400 IGHV3-7P01780 117 aa6.8□□□□□ -1.32
TPM1-213ENST00000558400 SNRPBP14678 240 aaKnown RBP6.8□□□□□ -1.32
TPM1-213ENST00000558400 GNG10P50151 68 aa6.8□□□□□ -1.32
TPM1-213ENST00000558400 CLDN12P56749 244 aa6.8□□□□□ -1.32
TPM1-213ENST00000558400 SCAND1P57086 179 aa6.8□□□□□ -1.32
TPM1-213ENST00000558400 HABP2Q14520 560 aaPredicted RBP6.8□□□□□ -1.32
TPM1-213ENST00000558400 NEDD8Q15843 81 aa6.8□□□□□ -1.32
TPM1-213ENST00000558400 HIST2H2BDQ6DRA6 164 aa6.8□□□□□ -1.32
TPM1-213ENST00000558400 ZNF880Q6PDB4 577 aa6.8□□□□□ -1.32
TPM1-213ENST00000558400 TMEM219Q86XT9 240 aa6.8□□□□□ -1.32
TPM1-213ENST00000558400 CROCCP3Q8IVE0 287 aa6.8□□□□□ -1.32
TPM1-213ENST00000558400 PRR18Q8N4B5 295 aa6.8□□□□□ -1.32
TPM1-213ENST00000558400 OR10R2Q8NGX6 335 aa6.8□□□□□ -1.32
TPM1-213ENST00000558400 OR1L1Q8NH94 360 aa6.8□□□□□ -1.32
TPM1-213ENST00000558400 LEAP2Q969E1 77 aa6.8□□□□□ -1.32
TPM1-213ENST00000558400 RAB3CQ96E17 227 aa6.8□□□□□ -1.32
TPM1-213ENST00000558400 CMSS1Q9BQ75 279 aaKnown RBP6.8□□□□□ -1.32
TPM1-213ENST00000558400 PECRQ9BY49 303 aa6.8□□□□□ -1.32
TPM1-213ENST00000558400 PRKDCP78527 4128 aaKnown RBP6.79□□□□□ -1.32
TPM1-213ENST00000558400 A0A0A6YYD4 124 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 IGHV3-43A0A0B4J1X8 118 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 IGHV1-3A0A0C4DH29 117 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 A0A1W2PPE3 182 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 SHISA3A0PJX4 238 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 FOXI3A8MTJ6 420 aaPredicted RBP6.79□□□□□ -1.32
TPM1-213ENST00000558400 SERPINE3A8MV23 424 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 M0QZ24 198 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 ITGB1BP1O14713 200 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 HSD17B6O14756 317 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 CD3GP09693 182 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 IGHV3-43DP0DP04 118 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 JUNBP17275 347 aaPredicted RBP6.79□□□□□ -1.32
TPM1-213ENST00000558400 ZBTB25P24278 435 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 CD1BP29016 333 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 SDC2P34741 201 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 ZNF137PP52743 207 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 EFNB2P52799 333 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 OR10A3P58181 314 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 BLCAPP62952 87 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 EBI3Q14213 229 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 HES1Q14469 280 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 HERPUD1Q15011 391 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 HMGN3Q15651 99 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 ARSJQ5FYB0 599 aaPredicted RBP6.79□□□□□ -1.32
TPM1-213ENST00000558400 CT45A1Q5HYN5 189 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 PRR31Q5SQ13 230 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 UTF1Q5T230 341 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 MOB3BQ86TA1 216 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 TGIF2LXQ8IUE1 241 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 DRAM1Q8N682 238 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 ZNF439Q8NDP4 499 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 OR8H1Q8NGG4 311 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 OR2T10Q8NGZ9 312 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 CT45A3Q8NHU0 189 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 SETD6Q8TBK2 473 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 ST6GALNAC6Q969X2 333 aa6.79□□□□□ -1.32
TPM1-213ENST00000558400 PHF21AQ96BD5 680 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms