RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 STEAP1Q9UHE8 339 aa11.12□□□□□ -0.63
VPS33B-206ENST00000557358 MGAT4AQ9UM21 535 aa11.12□□□□□ -0.63
VPS33B-206ENST00000557358 TMEM14DPA8MWL7 114 aa11.11□□□□□ -0.63
VPS33B-206ENST00000557358 C12orf77C9JDV5 145 aa11.11□□□□□ -0.63
VPS33B-206ENST00000557358 HBZP02008 142 aa11.11□□□□□ -0.63
VPS33B-206ENST00000557358 RAB3BP20337 219 aa11.11□□□□□ -0.63
VPS33B-206ENST00000557358 CHATP28329 748 aa11.11□□□□□ -0.63
VPS33B-206ENST00000557358 MXD1Q05195 221 aa11.11□□□□□ -0.63
VPS33B-206ENST00000557358 HES1Q14469 280 aa11.11□□□□□ -0.63
VPS33B-206ENST00000557358 PRR31Q5SQ13 230 aa11.11□□□□□ -0.63
VPS33B-206ENST00000557358 LDLRAD2Q5SZI1 272 aa11.11□□□□□ -0.63
VPS33B-206ENST00000557358 THNSL2Q86YJ6 484 aa11.11□□□□□ -0.63
VPS33B-206ENST00000557358 C8orf31Q8N9H6 132 aa11.11□□□□□ -0.63
VPS33B-206ENST00000557358 OR56B1Q8NGI3 324 aa11.11□□□□□ -0.63
VPS33B-206ENST00000557358 SETD6Q8TBK2 473 aa11.11□□□□□ -0.63
VPS33B-206ENST00000557358 LEAP2Q969E1 77 aa11.11□□□□□ -0.63
VPS33B-206ENST00000557358 GALMQ96C23 342 aa11.11□□□□□ -0.63
VPS33B-206ENST00000557358 CITED1Q99966 193 aa11.11□□□□□ -0.63
VPS33B-206ENST00000557358 OCSTAMPQ9BR26 566 aa11.11□□□□□ -0.63
VPS33B-206ENST00000557358 SLC25A33Q9BSK2 321 aa11.11□□□□□ -0.63
VPS33B-206ENST00000557358 TAF9BQ9HBM6 251 aa11.11□□□□□ -0.63
VPS33B-206ENST00000557358 OR2S2Q9NQN1 319 aa11.11□□□□□ -0.63
VPS33B-206ENST00000557358 RAB22AQ9UL26 194 aa11.11□□□□□ -0.63
VPS33B-206ENST00000557358 LY6LH3BQJ8 138 aa11.1□□□□□ -0.63
VPS33B-206ENST00000557358 C15orf65H3BRN8 121 aa11.1□□□□□ -0.63
VPS33B-206ENST00000557358 HSD17B6O14756 317 aa11.1□□□□□ -0.63
VPS33B-206ENST00000557358 TXNL1O43396 289 aa11.1□□□□□ -0.63
VPS33B-206ENST00000557358 CHST1O43916 411 aa11.1□□□□□ -0.63
VPS33B-206ENST00000557358 OR2F2O95006 317 aa11.1□□□□□ -0.63
VPS33B-206ENST00000557358 CLEC2LP0C7M8 214 aa11.1□□□□□ -0.63
VPS33B-206ENST00000557358 VSIG10L2P0DP72 767 aa11.1□□□□□ -0.63
VPS33B-206ENST00000557358 CD37P11049 281 aa11.1□□□□□ -0.63
VPS33B-206ENST00000557358 VDAC2P45880 294 aaPredicted RBP11.1□□□□□ -0.63
VPS33B-206ENST00000557358 UNC119Q13432 240 aa11.1□□□□□ -0.63
VPS33B-206ENST00000557358 HERPUD1Q15011 391 aa11.1□□□□□ -0.63
VPS33B-206ENST00000557358 STEAP3Q658P3 488 aa11.1□□□□□ -0.63
VPS33B-206ENST00000557358 SIGIRRQ6IA17 410 aa11.1□□□□□ -0.63
VPS33B-206ENST00000557358 MOB3BQ86TA1 216 aa11.1□□□□□ -0.63
VPS33B-206ENST00000557358 GAPTQ8N292 157 aa11.1□□□□□ -0.63
VPS33B-206ENST00000557358 LINC00311Q8N616 119 aa11.1□□□□□ -0.63
VPS33B-206ENST00000557358 OR51D1Q8NGF3 324 aa11.1□□□□□ -0.63
VPS33B-206ENST00000557358 FAAP24Q9BTP7 215 aa11.1□□□□□ -0.63
VPS33B-206ENST00000557358 JPT1Q9UK76 154 aa11.1□□□□□ -0.63
VPS33B-206ENST00000557358 IGHV3-43A0A0B4J1X8 118 aa11.09□□□□□ -0.63
VPS33B-206ENST00000557358 SMIM30A4D0T7 59 aa11.09□□□□□ -0.63
VPS33B-206ENST00000557358 METTL21EPA6NDL7 271 aa11.09□□□□□ -0.63
VPS33B-206ENST00000557358 IGHV3-43DP0DP04 118 aa11.09□□□□□ -0.63
VPS33B-206ENST00000557358 TMEM11P17152 192 aa11.09□□□□□ -0.63
VPS33B-206ENST00000557358 RCC1P18754 421 aaPredicted RBP11.09□□□□□ -0.63
VPS33B-206ENST00000557358 RPS19P39019 145 aaKnown RBP11.09□□□□□ -0.63
VPS33B-206ENST00000557358 EFNB2P52799 333 aa11.09□□□□□ -0.63
VPS33B-206ENST00000557358 OR10A3P58181 314 aa11.09□□□□□ -0.63
VPS33B-206ENST00000557358 C2orf68Q2NKX9 166 aa11.09□□□□□ -0.63
VPS33B-206ENST00000557358 C2orf76Q3KRA6 126 aa11.09□□□□□ -0.63
VPS33B-206ENST00000557358 HES5Q5TA89 166 aa11.09□□□□□ -0.63
VPS33B-206ENST00000557358 CCBE1Q6UXH8 406 aaPredicted RBP11.09□□□□□ -0.63
VPS33B-206ENST00000557358 C6orf201Q7Z4U5 140 aa11.09□□□□□ -0.63
VPS33B-206ENST00000557358 KLHDC1Q8N7A1 406 aa11.09□□□□□ -0.63
VPS33B-206ENST00000557358 OR56B4Q8NH76 319 aa11.09□□□□□ -0.63
VPS33B-206ENST00000557358 UBALD1Q8TB05 177 aa11.09□□□□□ -0.63
VPS33B-206ENST00000557358 MRPL30Q8TCC3 161 aaKnown RBP11.09□□□□□ -0.63
VPS33B-206ENST00000557358 SLC25A46Q96AG3 418 aa11.09□□□□□ -0.63
VPS33B-206ENST00000557358 RBM14Q96PK6 669 aaKnown RBP11.09□□□□□ -0.63
VPS33B-206ENST00000557358 GFI1Q99684 422 aa11.09□□□□□ -0.63
VPS33B-206ENST00000557358 SULT4A1Q9BR01 284 aa11.09□□□□□ -0.63
VPS33B-206ENST00000557358 DCUN1D5Q9BTE7 237 aa11.09□□□□□ -0.63
VPS33B-206ENST00000557358 MBNL3Q9NUK0 354 aaKnown RBP11.09□□□□□ -0.63
VPS33B-206ENST00000557358 HSF4Q9ULV5 492 aa11.09□□□□□ -0.63
VPS33B-206ENST00000557358 MOB4Q9Y3A3 225 aa11.09□□□□□ -0.63
VPS33B-206ENST00000557358 A0A1W2PPE3 182 aa11.08□□□□□ -0.64
VPS33B-206ENST00000557358 IFITM5A6NNB3 132 aa11.08□□□□□ -0.64
VPS33B-206ENST00000557358 NOTOA8MTQ0 251 aa11.08□□□□□ -0.64
VPS33B-206ENST00000557358 CD24P25063 80 aa11.08□□□□□ -0.64
VPS33B-206ENST00000557358 VEGFCP49767 419 aa11.08□□□□□ -0.64
VPS33B-206ENST00000557358 CLDN12P56749 244 aa11.08□□□□□ -0.64
VPS33B-206ENST00000557358 LOXL3P58215 753 aa11.08□□□□□ -0.64
VPS33B-206ENST00000557358 QRFPP83859 136 aa11.08□□□□□ -0.64
VPS33B-206ENST00000557358 HTD2P86397 168 aa11.08□□□□□ -0.64
VPS33B-206ENST00000557358 ZNF816Q0VGE8 651 aaPredicted RBP11.08□□□□□ -0.64
VPS33B-206ENST00000557358 ARL6IP1Q15041 203 aa11.08□□□□□ -0.64
VPS33B-206ENST00000557358 SFXN4Q6P4A7 337 aa11.08□□□□□ -0.64
VPS33B-206ENST00000557358 CROCCP3Q8IVE0 287 aa11.08□□□□□ -0.64
VPS33B-206ENST00000557358 Q8N2B8 174 aa11.08□□□□□ -0.64
VPS33B-206ENST00000557358 DRAM1Q8N682 238 aa11.08□□□□□ -0.64
VPS33B-206ENST00000557358 OR10V1Q8NGI7 309 aa11.08□□□□□ -0.64
VPS33B-206ENST00000557358 OR1L1Q8NH94 360 aa11.08□□□□□ -0.64
VPS33B-206ENST00000557358 DYNC2LI1Q8TCX1 351 aa11.08□□□□□ -0.64
VPS33B-206ENST00000557358 IL1F10Q8WWZ1 152 aa11.08□□□□□ -0.64
VPS33B-206ENST00000557358 NICN1Q9BSH3 213 aa11.08□□□□□ -0.64
VPS33B-206ENST00000557358 LPAR5Q9H1C0 372 aa11.08□□□□□ -0.64
VPS33B-206ENST00000557358 ZNF702PQ9H963 129 aa11.08□□□□□ -0.64
VPS33B-206ENST00000557358 CCDC59Q9P031 241 aaKnown RBP11.08□□□□□ -0.64
VPS33B-206ENST00000557358 SIGLEC9Q9Y336 463 aa11.08□□□□□ -0.64
VPS33B-206ENST00000557358 TET2Q6N021 2002 aaPredicted RBP11.08□□□□□ -0.64
VPS33B-206ENST00000557358 HSPA12AO43301 675 aa11.07□□□□□ -0.64
VPS33B-206ENST00000557358 SNRNP70P08621 437 aaKnown RBP11.07□□□□□ -0.64
VPS33B-206ENST00000557358 CD3GP09693 182 aa11.07□□□□□ -0.64
VPS33B-206ENST00000557358 SOX6P35712 828 aa11.07□□□□□ -0.64
VPS33B-206ENST00000557358 RORCP51449 518 aa11.07□□□□□ -0.64
VPS33B-206ENST00000557358 CNPY1Q3B7I2 92 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms