RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 TRBV2A0A0J9YWF9 115 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 TCRBV3S1A0A5B6 114 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 COLCA2A8K830 154 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 FTCDNL1E5RQL4 147 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 INMT-MINDY4F8WBC2 141 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 G3V2L1 256 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 G3V4G9 280 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 RAB27BO00194 218 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 GPR31O00270 319 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 DVL1O14640 695 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 PHOX2AO14813 284 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 PPP1R2P9O14990 202 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 NPIPB7O75200 414 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 SC5DO75845 299 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 CFDP00746 253 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-247ENST00000557311 IGHV3-13P01766 116 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 TCRBP04435 133 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 CSF1P09603 554 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 GKN3PP0CG01 181 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 PET100P0DJ07 73 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 IGHV4-38-2P0DP08 117 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 PNMTP11086 282 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 AREGP15514 252 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 IL7RP16871 459 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 HTR2CP28335 458 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 SOAT1P35610 550 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 RPL4P36578 427 aaKnown RBP4.04□□□□□ -1.76
ATXN3-247ENST00000557311 RBMXP38159 391 aaKnown RBP4.04□□□□□ -1.76
ATXN3-247ENST00000557311 ID1P41134 155 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 GLP1RP43220 463 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 UCP2P55851 309 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 ZP1P60852 638 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 RPL15P61313 204 aaKnown RBP4.04□□□□□ -1.76
ATXN3-247ENST00000557311 ADARB1P78563 741 aaKnown RBP4.04□□□□□ -1.76
ATXN3-247ENST00000557311 MXD1Q05195 221 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 UBE2V1Q13404 147 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 KIAA0141Q14154 515 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-247ENST00000557311 C2orf68Q2NKX9 166 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 DEFB112Q30KQ8 113 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 TIMM50Q3ZCQ8 353 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 MESTQ5EB52 335 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 GLYATQ6IB77 296 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 ZNF774Q6NX45 483 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 TMPRSS11AQ6ZMR5 421 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 FRRS1Q6ZNA5 592 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 RTN4RL2Q86UN3 420 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 RNF130Q86XS8 419 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 RIMKLAQ8IXN7 391 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 C20orf196Q8IYI0 205 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 FTMTQ8N4E7 242 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 SPICQ8N5J4 248 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 PNLDC1Q8NA58 520 aaKnown RBP4.04□□□□□ -1.76
ATXN3-247ENST00000557311 NECAP1Q8NC96 275 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 DUSP18Q8NEJ0 188 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 OR51L1Q8NGJ5 315 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 OR1S1Q8NH92 325 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 LINC01006Q8NI28 216 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 MRAPQ8TCY5 172 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 GNPDA2Q8TDQ7 276 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 RNF125Q96EQ8 232 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 SLC35G5Q96KT7 338 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 ZNF583Q96ND8 569 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 RDH12Q96NR8 316 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 TSPAN32Q96QS1 320 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 TP53RKQ96S44 253 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 SDHCQ99643 169 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-247ENST00000557311 NICN1Q9BSH3 213 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 DPY30Q9C005 99 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 OR51I1Q9H343 314 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 TUBB1Q9H4B7 451 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 PATZ1Q9HBE1 687 aaKnown RBP4.04□□□□□ -1.76
ATXN3-247ENST00000557311 HRASLSQ9HDD0 168 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 B3GAT2Q9NPZ5 323 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 SLC2A9Q9NRM0 540 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 CYSLTR2Q9NS75 346 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 PLEKHJ1Q9NW61 149 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 RBFOX1Q9NWB1 397 aaKnown RBP4.04□□□□□ -1.76
ATXN3-247ENST00000557311 RNF150Q9ULK6 438 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 DNAJC15Q9Y5T4 150 aa4.04□□□□□ -1.76
ATXN3-247ENST00000557311 SOX21Q9Y651 276 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-247ENST00000557311 IGHV3OR16-10A0A075B7F0 116 aa4.03□□□□□ -1.76
ATXN3-247ENST00000557311 TRAV39A0A0B4J263 110 aa4.03□□□□□ -1.76
ATXN3-247ENST00000557311 LOC102723971A0A1B0GUV8 181 aa4.03□□□□□ -1.76
ATXN3-247ENST00000557311 ANXA2P2A6NMY6 339 aa4.03□□□□□ -1.76
ATXN3-247ENST00000557311 ZNF726A6NNF4 738 aa4.03□□□□□ -1.76
ATXN3-247ENST00000557311 ZNF705EA8MWA4 302 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-247ENST00000557311 OR11H12B2RN74 326 aa4.03□□□□□ -1.76
ATXN3-247ENST00000557311 SPRY3O43610 288 aa4.03□□□□□ -1.76
ATXN3-247ENST00000557311 CST4P01036 141 aa4.03□□□□□ -1.76
ATXN3-247ENST00000557311 PTHP01270 115 aa4.03□□□□□ -1.76
ATXN3-247ENST00000557311 GCGP01275 180 aa4.03□□□□□ -1.76
ATXN3-247ENST00000557311 PRB2P02812 416 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-247ENST00000557311 DBIP07108 87 aaKnown RBP4.03□□□□□ -1.76
ATXN3-247ENST00000557311 UBBP0CG47 229 aa4.03□□□□□ -1.76
ATXN3-247ENST00000557311 IRF2P14316 349 aa4.03□□□□□ -1.76
ATXN3-247ENST00000557311 RAB7AP51149 207 aa4.03□□□□□ -1.76
ATXN3-247ENST00000557311 RAB9AP51151 201 aa4.03□□□□□ -1.76
ATXN3-247ENST00000557311 HCCSP53701 268 aa4.03□□□□□ -1.76
ATXN3-247ENST00000557311 CRISP1P54107 249 aa4.03□□□□□ -1.76
ATXN3-247ENST00000557311 MFAP4P55083 255 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms