RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 PRB3Q04118 309 aaPredicted RBP10.32□□□□□ -0.76
SYNE2-219ENST00000555323 KLRD1Q13241 179 aa10.32□□□□□ -0.76
SYNE2-219ENST00000555323 HERPUD1Q15011 391 aa10.32□□□□□ -0.76
SYNE2-219ENST00000555323 SNX29P2Q8IUI4 249 aa10.32□□□□□ -0.76
SYNE2-219ENST00000555323 PNKDQ8N490 385 aa10.32□□□□□ -0.76
SYNE2-219ENST00000555323 PRR18Q8N4B5 295 aa10.32□□□□□ -0.76
SYNE2-219ENST00000555323 LINC00311Q8N616 119 aa10.32□□□□□ -0.76
SYNE2-219ENST00000555323 GVQW1Q8N7I0 195 aa10.32□□□□□ -0.76
SYNE2-219ENST00000555323 OR9G1Q8NH87 305 aa10.32□□□□□ -0.76
SYNE2-219ENST00000555323 UBALD1Q8TB05 177 aa10.32□□□□□ -0.76
SYNE2-219ENST00000555323 SUCNR1Q9BXA5 334 aa10.32□□□□□ -0.76
SYNE2-219ENST00000555323 CLEC7AQ9BXN2 247 aa10.32□□□□□ -0.76
SYNE2-219ENST00000555323 PRDM13Q9H4Q3 707 aa10.32□□□□□ -0.76
SYNE2-219ENST00000555323 ZNF286AQ9HBT8 521 aa10.32□□□□□ -0.76
SYNE2-219ENST00000555323 ANXA10Q9UJ72 324 aa10.32□□□□□ -0.76
SYNE2-219ENST00000555323 PSG11Q9UQ72 335 aa10.32□□□□□ -0.76
SYNE2-219ENST00000555323 TRBV6-7A0A0A0MS04 114 aa10.31□□□□□ -0.76
SYNE2-219ENST00000555323 GABARAPH6UMI1 98 aa10.31□□□□□ -0.76
SYNE2-219ENST00000555323 J3QR06 171 aa10.31□□□□□ -0.76
SYNE2-219ENST00000555323 ITGB1BP1O14713 200 aa10.31□□□□□ -0.76
SYNE2-219ENST00000555323 NPFFO15130 113 aa10.31□□□□□ -0.76
SYNE2-219ENST00000555323 NFYBP25208 207 aa10.31□□□□□ -0.76
SYNE2-219ENST00000555323 PRRX1P54821 245 aa10.31□□□□□ -0.76
SYNE2-219ENST00000555323 MINOS1Q5TGZ0 78 aa10.31□□□□□ -0.76
SYNE2-219ENST00000555323 IL17RELQ6ZVW7 336 aa10.31□□□□□ -0.76
SYNE2-219ENST00000555323 ZNF439Q8NDP4 499 aa10.31□□□□□ -0.76
SYNE2-219ENST00000555323 BEST4Q8NFU0 473 aa10.31□□□□□ -0.76
SYNE2-219ENST00000555323 OR52L2PQ8NGH6 319 aa10.31□□□□□ -0.76
SYNE2-219ENST00000555323 OR4P4Q8NGL7 312 aa10.31□□□□□ -0.76
SYNE2-219ENST00000555323 GCDHQ92947 438 aaPredicted RBP10.31□□□□□ -0.76
SYNE2-219ENST00000555323 AJUBAQ96IF1 538 aa10.31□□□□□ -0.76
SYNE2-219ENST00000555323 PTTG2Q9NZH5 202 aa10.31□□□□□ -0.76
SYNE2-219ENST00000555323 ZNF69Q9UC07 566 aa10.31□□□□□ -0.76
SYNE2-219ENST00000555323 MTFP1Q9UDX5 166 aa10.31□□□□□ -0.76
SYNE2-219ENST00000555323 TBL2Q9Y4P3 447 aaKnown RBP10.31□□□□□ -0.76
SYNE2-219ENST00000555323 MINOS1-NBL1R4GNA1 71 aa10.31□□□□□ -0.76
SYNE2-219ENST00000555323 V9GYH0 126 aa10.31□□□□□ -0.76
SYNE2-219ENST00000555323 IGHV3OR16-10A0A075B7F0 116 aa10.3□□□□□ -0.76
SYNE2-219ENST00000555323 LY6LH3BQJ8 138 aa10.3□□□□□ -0.76
SYNE2-219ENST00000555323 TOR1AO14656 332 aa10.3□□□□□ -0.76
SYNE2-219ENST00000555323 GSTZ1O43708 216 aaPredicted RBP10.3□□□□□ -0.76
SYNE2-219ENST00000555323 RGS11O94810 467 aa10.3□□□□□ -0.76
SYNE2-219ENST00000555323 ARG1P05089 322 aa10.3□□□□□ -0.76
SYNE2-219ENST00000555323 FAM157CP0CG43 387 aa10.3□□□□□ -0.76
SYNE2-219ENST00000555323 SRD5A1P18405 259 aa10.3□□□□□ -0.76
SYNE2-219ENST00000555323 EPHA1P21709 976 aa10.3□□□□□ -0.76
SYNE2-219ENST00000555323 COX7A1P24310 79 aa10.3□□□□□ -0.76
SYNE2-219ENST00000555323 ZNF134P52741 427 aa10.3□□□□□ -0.76
SYNE2-219ENST00000555323 SSBP1Q04837 148 aaKnown RBP10.3□□□□□ -0.76
SYNE2-219ENST00000555323 SCGB2A2Q13296 93 aa10.3□□□□□ -0.76
SYNE2-219ENST00000555323 IL18Q14116 193 aa10.3□□□□□ -0.76
SYNE2-219ENST00000555323 LTC4SQ16873 150 aa10.3□□□□□ -0.76
SYNE2-219ENST00000555323 HLA-DRB5Q30154 266 aa10.3□□□□□ -0.76
SYNE2-219ENST00000555323 IGSF11Q5DX21 431 aa10.3□□□□□ -0.76
SYNE2-219ENST00000555323 CT45A1Q5HYN5 189 aa10.3□□□□□ -0.76
SYNE2-219ENST00000555323 LDLRAD2Q5SZI1 272 aa10.3□□□□□ -0.76
SYNE2-219ENST00000555323 FAM53AQ6NSI3 398 aaPredicted RBP10.3□□□□□ -0.76
SYNE2-219ENST00000555323 BRD3OSQ6XYD6 125 aa10.3□□□□□ -0.76
SYNE2-219ENST00000555323 SLC25A48Q6ZT89 311 aaKnown RBP10.3□□□□□ -0.76
SYNE2-219ENST00000555323 LYSMD2Q8IV50 215 aa10.3□□□□□ -0.76
SYNE2-219ENST00000555323 PDZD9Q8IXQ8 264 aa10.3□□□□□ -0.76
SYNE2-219ENST00000555323 OR52I2Q8NH67 350 aa10.3□□□□□ -0.76
SYNE2-219ENST00000555323 CT45A3Q8NHU0 189 aa10.3□□□□□ -0.76
SYNE2-219ENST00000555323 FCAMRQ8WWV6 532 aa10.3□□□□□ -0.76
SYNE2-219ENST00000555323 IL1F10Q8WWZ1 152 aa10.3□□□□□ -0.76
SYNE2-219ENST00000555323 MAFIPQ8WZ33 124 aa10.3□□□□□ -0.76
SYNE2-219ENST00000555323 SNAPC3Q92966 411 aa10.3□□□□□ -0.76
SYNE2-219ENST00000555323 CREB3L1Q96BA8 519 aa10.3□□□□□ -0.76
SYNE2-219ENST00000555323 MALSU1Q96EH3 234 aa10.3□□□□□ -0.76
SYNE2-219ENST00000555323 MS4A7Q9GZW8 240 aaPredicted RBP10.3□□□□□ -0.76
SYNE2-219ENST00000555323 MEGF9Q9H1U4 602 aa10.3□□□□□ -0.76
SYNE2-219ENST00000555323 MMP28Q9H239 520 aa10.3□□□□□ -0.76
SYNE2-219ENST00000555323 GNG12Q9UBI6 72 aa10.3□□□□□ -0.76
SYNE2-219ENST00000555323 RBMX2Q9Y388 322 aaKnown RBP10.3□□□□□ -0.76
SYNE2-219ENST00000555323 SONP18583 2426 aaKnown RBP10.3□□□□□ -0.76
SYNE2-219ENST00000555323 FN1P02751 2386 aaKnown RBP10.3□□□□□ -0.76
SYNE2-219ENST00000555323 NAV3Q8IVL0 2385 aa10.29□□□□□ -0.76
SYNE2-219ENST00000555323 IGHV3-43A0A0B4J1X8 118 aa10.29□□□□□ -0.76
SYNE2-219ENST00000555323 BUB1B-PAK6H3BSN5 160 aa10.29□□□□□ -0.76
SYNE2-219ENST00000555323 RBBP9O75884 186 aa10.29□□□□□ -0.76
SYNE2-219ENST00000555323 IGHV3-43DP0DP04 118 aa10.29□□□□□ -0.76
SYNE2-219ENST00000555323 HTR1DP28221 377 aa10.29□□□□□ -0.76
SYNE2-219ENST00000555323 SAA4P35542 130 aa10.29□□□□□ -0.76
SYNE2-219ENST00000555323 CEACAM6P40199 344 aa10.29□□□□□ -0.76
SYNE2-219ENST00000555323 ZNF137PP52743 207 aa10.29□□□□□ -0.76
SYNE2-219ENST00000555323 MADCAM1Q13477 382 aa10.29□□□□□ -0.76
SYNE2-219ENST00000555323 RUSC1-AS1Q66K80 236 aa10.29□□□□□ -0.76
SYNE2-219ENST00000555323 FAM131AQ6UXB0 335 aa10.29□□□□□ -0.76
SYNE2-219ENST00000555323 LURAP1LQ8IV03 231 aa10.29□□□□□ -0.76
SYNE2-219ENST00000555323 BCL6BQ8N143 479 aaPredicted RBP10.29□□□□□ -0.76
SYNE2-219ENST00000555323 OR5AP2Q8NGF4 316 aa10.29□□□□□ -0.76
SYNE2-219ENST00000555323 OR10J5Q8NHC4 309 aa10.29□□□□□ -0.76
SYNE2-219ENST00000555323 FAM216AQ8WUB2 273 aa10.29□□□□□ -0.76
SYNE2-219ENST00000555323 SMIM4Q8WVI0 70 aa10.29□□□□□ -0.76
SYNE2-219ENST00000555323 LEAP2Q969E1 77 aa10.29□□□□□ -0.76
SYNE2-219ENST00000555323 AGMATQ9BSE5 352 aa10.29□□□□□ -0.76
SYNE2-219ENST00000555323 GHITMQ9H3K2 345 aa10.29□□□□□ -0.76
SYNE2-219ENST00000555323 DPM3Q9P2X0 92 aa10.29□□□□□ -0.76
SYNE2-219ENST00000555323 KLK11Q9UBX7 282 aa10.29□□□□□ -0.76
SYNE2-219ENST00000555323 SLC23A1Q9UHI7 598 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms