RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 ZNF585BQ52M93 769 aa8.36□□□□□ -1.07
RAB5B-206ENST00000549505 ODF3L1Q8IXM7 274 aa8.36□□□□□ -1.07
RAB5B-206ENST00000549505 RELL2Q8NC24 303 aaPredicted RBP8.36□□□□□ -1.07
RAB5B-206ENST00000549505 OR52M1Q8NGK5 317 aa8.36□□□□□ -1.07
RAB5B-206ENST00000549505 VKORC1Q9BQB6 163 aa8.36□□□□□ -1.07
RAB5B-206ENST00000549505 OR51B6Q9H340 312 aa8.36□□□□□ -1.07
RAB5B-206ENST00000549505 TAF9BQ9HBM6 251 aa8.36□□□□□ -1.07
RAB5B-206ENST00000549505 OR1A1Q9P1Q5 309 aa8.36□□□□□ -1.07
RAB5B-206ENST00000549505 LPAR3Q9UBY5 353 aa8.36□□□□□ -1.07
RAB5B-206ENST00000549505 IGKV1D-17A0A075B6S4 117 aa8.35□□□□□ -1.07
RAB5B-206ENST00000549505 NKX2-6A6NCS4 301 aa8.35□□□□□ -1.07
RAB5B-206ENST00000549505 C12orf77C9JDV5 145 aa8.35□□□□□ -1.07
RAB5B-206ENST00000549505 SIRPB1O00241 398 aa8.35□□□□□ -1.07
RAB5B-206ENST00000549505 BET1O15155 118 aa8.35□□□□□ -1.07
RAB5B-206ENST00000549505 SPP1P10451 314 aa8.35□□□□□ -1.07
RAB5B-206ENST00000549505 ZNF66Q6ZN08 573 aa8.35□□□□□ -1.07
RAB5B-206ENST00000549505 LURAP1LQ8IV03 231 aa8.35□□□□□ -1.07
RAB5B-206ENST00000549505 GCSAMQ8N6F7 178 aa8.35□□□□□ -1.07
RAB5B-206ENST00000549505 NANPQ8TBE9 248 aa8.35□□□□□ -1.07
RAB5B-206ENST00000549505 PARP11Q9NR21 331 aa8.35□□□□□ -1.07
RAB5B-206ENST00000549505 LIN7CQ9NUP9 197 aaKnown RBP8.35□□□□□ -1.07
RAB5B-206ENST00000549505 UBE2J1Q9Y385 318 aaPredicted RBP8.35□□□□□ -1.07
RAB5B-206ENST00000549505 AHCTF1Q8WYP5 2266 aa8.35□□□□□ -1.07
RAB5B-206ENST00000549505 A0A1B0GW64 132 aa8.35□□□□□ -1.07
RAB5B-206ENST00000549505 TNFRSF13BO14836 293 aaPredicted RBP8.35□□□□□ -1.07
RAB5B-206ENST00000549505 MGST3O14880 152 aa8.35□□□□□ -1.07
RAB5B-206ENST00000549505 IGKV1-39P01597 117 aa8.35□□□□□ -1.07
RAB5B-206ENST00000549505 IGKV1D-39P04432 117 aa8.35□□□□□ -1.07
RAB5B-206ENST00000549505 THBDP07204 575 aa8.35□□□□□ -1.07
RAB5B-206ENST00000549505 GRPP07492 148 aa8.35□□□□□ -1.07
RAB5B-206ENST00000549505 RNF224P0DH78 156 aa8.35□□□□□ -1.07
RAB5B-206ENST00000549505 PSG2P11465 335 aa8.35□□□□□ -1.07
RAB5B-206ENST00000549505 PRDX2P32119 198 aa8.35□□□□□ -1.07
RAB5B-206ENST00000549505 RAB5CP51148 216 aa8.35□□□□□ -1.07
RAB5B-206ENST00000549505 ZNF561Q8N587 486 aa8.35□□□□□ -1.07
RAB5B-206ENST00000549505 OR5T2Q8NGG2 359 aa8.35□□□□□ -1.07
RAB5B-206ENST00000549505 CA5BP1Q8WTZ4 195 aa8.35□□□□□ -1.07
RAB5B-206ENST00000549505 GALMQ96C23 342 aa8.35□□□□□ -1.07
RAB5B-206ENST00000549505 MMP26Q9NRE1 261 aa8.35□□□□□ -1.07
RAB5B-206ENST00000549505 KCNIP1Q9NZI2 227 aa8.35□□□□□ -1.07
RAB5B-206ENST00000549505 ERRFI1Q9UJM3 462 aaPredicted RBP8.35□□□□□ -1.07
RAB5B-206ENST00000549505 JPT1Q9UK76 154 aa8.35□□□□□ -1.07
RAB5B-206ENST00000549505 TRAPPC2LQ9UL33 140 aa8.35□□□□□ -1.07
RAB5B-206ENST00000549505 SESN1Q9Y6P5 492 aa8.35□□□□□ -1.07
RAB5B-206ENST00000549505 C16orf97H3BN30 126 aa8.34□□□□□ -1.07
RAB5B-206ENST00000549505 K7N7A8 449 aa8.34□□□□□ -1.07
RAB5B-206ENST00000549505 YPEL1O60688 119 aa8.34□□□□□ -1.07
RAB5B-206ENST00000549505 GZMHP20718 246 aa8.34□□□□□ -1.07
RAB5B-206ENST00000549505 TUSC1Q2TAM9 212 aa8.34□□□□□ -1.07
RAB5B-206ENST00000549505 STUMQ69YW2 141 aa8.34□□□□□ -1.07
RAB5B-206ENST00000549505 BTNL8Q6UX41 500 aa8.34□□□□□ -1.07
RAB5B-206ENST00000549505 ZNF695Q8IW36 515 aa8.34□□□□□ -1.07
RAB5B-206ENST00000549505 ZNF295-AS1Q8N0V1 137 aa8.34□□□□□ -1.07
RAB5B-206ENST00000549505 COMMD1Q8N668 190 aa8.34□□□□□ -1.07
RAB5B-206ENST00000549505 C2CD4CQ8TF44 421 aa8.34□□□□□ -1.07
RAB5B-206ENST00000549505 SECTM1Q8WVN6 248 aa8.34□□□□□ -1.07
RAB5B-206ENST00000549505 YPEL2Q96QA6 119 aa8.34□□□□□ -1.07
RAB5B-206ENST00000549505 ZNF83P51522 516 aa8.34□□□□□ -1.07
RAB5B-206ENST00000549505 PAX9P55771 341 aa8.34□□□□□ -1.07
RAB5B-206ENST00000549505 TMEM33P57088 247 aa8.34□□□□□ -1.07
RAB5B-206ENST00000549505 COL10A1Q03692 680 aa8.34□□□□□ -1.07
RAB5B-206ENST00000549505 AKIRIN2Q53H80 203 aa8.34□□□□□ -1.07
RAB5B-206ENST00000549505 PRAMEF6Q5VXH4 476 aa8.34□□□□□ -1.07
RAB5B-206ENST00000549505 SLC16A13Q7RTY0 426 aa8.34□□□□□ -1.07
RAB5B-206ENST00000549505 OR10A7Q8NGE5 316 aa8.34□□□□□ -1.07
RAB5B-206ENST00000549505 NEK7Q8TDX7 302 aa8.34□□□□□ -1.07
RAB5B-206ENST00000549505 AGMATQ9BSE5 352 aa8.34□□□□□ -1.07
RAB5B-206ENST00000549505 PLEKHF2Q9H8W4 249 aa8.34□□□□□ -1.07
RAB5B-206ENST00000549505 RAB9BQ9NP90 201 aa8.34□□□□□ -1.07
RAB5B-206ENST00000549505 FBXL17Q9UF56 701 aa8.34□□□□□ -1.07
RAB5B-206ENST00000549505 M0R1B8 84 aa8.34□□□□□ -1.08
RAB5B-206ENST00000549505 WNT9BO14905 357 aa8.34□□□□□ -1.08
RAB5B-206ENST00000549505 ZNF205O95201 554 aa8.34□□□□□ -1.08
RAB5B-206ENST00000549505 OR8U8P0C7N1 319 aa8.34□□□□□ -1.08
RAB5B-206ENST00000549505 EGR1P18146 543 aa8.34□□□□□ -1.08
RAB5B-206ENST00000549505 Q3ZCU0 254 aa8.34□□□□□ -1.08
RAB5B-206ENST00000549505 C5orf24Q7Z6I8 188 aa8.34□□□□□ -1.08
RAB5B-206ENST00000549505 LRP11Q86VZ4 500 aa8.34□□□□□ -1.08
RAB5B-206ENST00000549505 DRAM1Q8N682 238 aa8.34□□□□□ -1.08
RAB5B-206ENST00000549505 PPP1R35Q8TAP8 253 aa8.34□□□□□ -1.08
RAB5B-206ENST00000549505 LRRC29Q8WV35 223 aa8.34□□□□□ -1.08
RAB5B-206ENST00000549505 C5orf30Q96GV9 206 aa8.34□□□□□ -1.08
RAB5B-206ENST00000549505 PLA2G2EQ9NZK7 142 aa8.34□□□□□ -1.08
RAB5B-206ENST00000549505 RBFOX2O43251 390 aaKnown RBP eCLIP8.33□□□□□ -1.08
RAB5B-206ENST00000549505 ATG12O94817 140 aa8.33□□□□□ -1.08
RAB5B-206ENST00000549505 LY86O95711 162 aa8.33□□□□□ -1.08
RAB5B-206ENST00000549505 HBZP02008 142 aa8.33□□□□□ -1.08
RAB5B-206ENST00000549505 APOC3P02656 99 aa8.33□□□□□ -1.08
RAB5B-206ENST00000549505 FABP6P51161 128 aa8.33□□□□□ -1.08
RAB5B-206ENST00000549505 FOXC1Q12948 553 aa8.33□□□□□ -1.08
RAB5B-206ENST00000549505 ZNF826PQ6ZT77 177 aa8.33□□□□□ -1.08
RAB5B-206ENST00000549505 PUSL1Q8N0Z8 303 aaKnown RBP8.33□□□□□ -1.08
RAB5B-206ENST00000549505 BATF2Q8N1L9 274 aa8.33□□□□□ -1.08
RAB5B-206ENST00000549505 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.33□□□□□ -1.08
RAB5B-206ENST00000549505 RAB40CQ96S21 281 aa8.33□□□□□ -1.08
RAB5B-206ENST00000549505 SLC25A31Q9H0C2 315 aa8.33□□□□□ -1.08
RAB5B-206ENST00000549505 WFDC1Q9HC57 220 aa8.33□□□□□ -1.08
RAB5B-206ENST00000549505 GSKIPQ9P0R6 139 aa8.33□□□□□ -1.08
RAB5B-206ENST00000549505 WSB1Q9Y6I7 421 aa8.33□□□□□ -1.08
RAB5B-206ENST00000549505 CACNA1HO95180 2353 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms