RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 TMEM106AQ96A25 262 aa10.62□□□□□ -0.71
CDX2-202ENST00000548877 CITED4Q96RK1 184 aa10.62□□□□□ -0.71
CDX2-202ENST00000548877 CHST6Q9GZX3 395 aa10.62□□□□□ -0.71
CDX2-202ENST00000548877 PPIL3Q9H2H8 161 aaKnown RBP10.62□□□□□ -0.71
CDX2-202ENST00000548877 GAR1Q9NY12 217 aaKnown RBP10.62□□□□□ -0.71
CDX2-202ENST00000548877 DAPK2Q9UIK4 370 aa10.62□□□□□ -0.71
CDX2-202ENST00000548877 SLC7A11Q9UPY5 501 aa10.62□□□□□ -0.71
CDX2-202ENST00000548877 V9GY05 133 aa10.62□□□□□ -0.71
CDX2-202ENST00000548877 HYDINQ4G0P3 5121 aa10.61□□□□□ -0.71
CDX2-202ENST00000548877 FUOMA2VDF0 154 aa10.61□□□□□ -0.71
CDX2-202ENST00000548877 FAM25AB3EWG3 89 aa10.61□□□□□ -0.71
CDX2-202ENST00000548877 FAM25CB3EWG5 89 aa10.61□□□□□ -0.71
CDX2-202ENST00000548877 FAM25GB3EWG6 89 aa10.61□□□□□ -0.71
CDX2-202ENST00000548877 SEC14L6B5MCN3 397 aa10.61□□□□□ -0.71
CDX2-202ENST00000548877 TOR1AO14656 332 aa10.61□□□□□ -0.71
CDX2-202ENST00000548877 APOA1P02647 267 aa10.61□□□□□ -0.71
CDX2-202ENST00000548877 FSTP19883 344 aa10.61□□□□□ -0.71
CDX2-202ENST00000548877 GABRR1P24046 479 aa10.61□□□□□ -0.71
CDX2-202ENST00000548877 INSL3P51460 131 aa10.61□□□□□ -0.71
CDX2-202ENST00000548877 FUT6P51993 359 aa10.61□□□□□ -0.71
CDX2-202ENST00000548877 FHL3Q13643 280 aa10.61□□□□□ -0.71
CDX2-202ENST00000548877 UBE2V2Q15819 145 aa10.61□□□□□ -0.71
CDX2-202ENST00000548877 TRIM16LQ309B1 348 aa10.61□□□□□ -0.71
CDX2-202ENST00000548877 SPIN3Q5JUX0 258 aa10.61□□□□□ -0.71
CDX2-202ENST00000548877 SLC35E3Q7Z769 313 aa10.61□□□□□ -0.71
CDX2-202ENST00000548877 TRAPPC6BQ86SZ2 158 aa10.61□□□□□ -0.71
CDX2-202ENST00000548877 FOXRED2Q8IWF2 684 aa10.61□□□□□ -0.71
CDX2-202ENST00000548877 DRAM1Q8N682 238 aa10.61□□□□□ -0.71
CDX2-202ENST00000548877 RGP1Q92546 391 aaPredicted RBP10.61□□□□□ -0.71
CDX2-202ENST00000548877 EMG1Q92979 244 aaKnown RBP10.61□□□□□ -0.71
CDX2-202ENST00000548877 SLAMF9Q96A28 289 aa10.61□□□□□ -0.71
CDX2-202ENST00000548877 MIXL1Q9H2W2 232 aa10.61□□□□□ -0.71
CDX2-202ENST00000548877 GLS2Q9UI32 602 aa10.61□□□□□ -0.71
CDX2-202ENST00000548877 ETV7Q9Y603 341 aa10.61□□□□□ -0.71
CDX2-202ENST00000548877 FAM230AA0A1W2PPH8 454 aa10.6□□□□□ -0.71
CDX2-202ENST00000548877 A0A1W2PPI3 338 aa10.6□□□□□ -0.71
CDX2-202ENST00000548877 A6NIN4 97 aa10.6□□□□□ -0.71
CDX2-202ENST00000548877 IFITM5A6NNB3 132 aa10.6□□□□□ -0.71
CDX2-202ENST00000548877 HPGDSO60760 199 aa10.6□□□□□ -0.71
CDX2-202ENST00000548877 PTTG1O95997 202 aa10.6□□□□□ -0.71
CDX2-202ENST00000548877 CALCBP10092 127 aa10.6□□□□□ -0.71
CDX2-202ENST00000548877 SOX2P48431 317 aa10.6□□□□□ -0.71
CDX2-202ENST00000548877 RAB25P57735 213 aa10.6□□□□□ -0.71
CDX2-202ENST00000548877 PITPNAQ00169 270 aa10.6□□□□□ -0.71
CDX2-202ENST00000548877 PNLIPRP3Q17RR3 467 aa10.6□□□□□ -0.71
CDX2-202ENST00000548877 SLC25A26Q70HW3 274 aa10.6□□□□□ -0.71
CDX2-202ENST00000548877 OR13C3Q8NGS6 347 aa10.6□□□□□ -0.71
CDX2-202ENST00000548877 TRMT10AQ8TBZ6 339 aaKnown RBP10.6□□□□□ -0.71
CDX2-202ENST00000548877 C15orf40Q8WUR7 153 aa10.6□□□□□ -0.71
CDX2-202ENST00000548877 KRTAP17-1Q9BYP8 105 aa10.6□□□□□ -0.71
CDX2-202ENST00000548877 IL36RNQ9UBH0 155 aa10.6□□□□□ -0.71
CDX2-202ENST00000548877 LINC00527Q9UJ94 153 aa10.6□□□□□ -0.71
CDX2-202ENST00000548877 SPATA2Q9UM82 520 aa10.6□□□□□ -0.71
CDX2-202ENST00000548877 V9GYH0 126 aa10.6□□□□□ -0.71
CDX2-202ENST00000548877 LOC107986453A0A1B0GWG9 222 aa10.59□□□□□ -0.71
CDX2-202ENST00000548877 A0A1W2PPK0 400 aa10.59□□□□□ -0.71
CDX2-202ENST00000548877 SMIM30A4D0T7 59 aa10.59□□□□□ -0.71
CDX2-202ENST00000548877 AP4M1O00189 453 aa10.59□□□□□ -0.71
CDX2-202ENST00000548877 TPPPO94811 219 aa10.59□□□□□ -0.71
CDX2-202ENST00000548877 RPLP1P05386 114 aaKnown RBP10.59□□□□□ -0.71
CDX2-202ENST00000548877 CSN2P05814 226 aa10.59□□□□□ -0.71
CDX2-202ENST00000548877 ELANEP08246 267 aa10.59□□□□□ -0.71
CDX2-202ENST00000548877 SCN1BQ07699 218 aa10.59□□□□□ -0.71
CDX2-202ENST00000548877 FOXE3Q13461 319 aa10.59□□□□□ -0.71
CDX2-202ENST00000548877 EBI3Q14213 229 aa10.59□□□□□ -0.71
CDX2-202ENST00000548877 DEFB136Q30KP8 78 aa10.59□□□□□ -0.71
CDX2-202ENST00000548877 PYDC2Q56P42 97 aa10.59□□□□□ -0.71
CDX2-202ENST00000548877 UBE2NLQ5JXB2 153 aa10.59□□□□□ -0.71
CDX2-202ENST00000548877 HACD4Q5VWC8 232 aa10.59□□□□□ -0.71
CDX2-202ENST00000548877 GLT8D1Q68CQ7 371 aa10.59□□□□□ -0.71
CDX2-202ENST00000548877 CNIH2Q6PI25 160 aa10.59□□□□□ -0.71
CDX2-202ENST00000548877 LCNL1Q6ZST4 164 aa10.59□□□□□ -0.71
CDX2-202ENST00000548877 LYSMD2Q8IV50 215 aa10.59□□□□□ -0.71
CDX2-202ENST00000548877 OR8H3Q8N146 312 aa10.59□□□□□ -0.71
CDX2-202ENST00000548877 FAM58AQ8N1B3 248 aa10.59□□□□□ -0.71
CDX2-202ENST00000548877 NKAIN3Q8N8D7 197 aa10.59□□□□□ -0.71
CDX2-202ENST00000548877 SAMD12Q8N8I0 201 aa10.59□□□□□ -0.71
CDX2-202ENST00000548877 OR56B4Q8NH76 319 aa10.59□□□□□ -0.71
CDX2-202ENST00000548877 OR9G1Q8NH87 305 aa10.59□□□□□ -0.71
CDX2-202ENST00000548877 RPEQ96AT9 228 aa10.59□□□□□ -0.71
CDX2-202ENST00000548877 SOSTQ9BQB4 213 aa10.59□□□□□ -0.71
CDX2-202ENST00000548877 GON7Q9BXV9 100 aa10.59□□□□□ -0.71
CDX2-202ENST00000548877 CHST5Q9GZS9 411 aa10.59□□□□□ -0.71
CDX2-202ENST00000548877 SRRQ9GZT4 340 aa10.59□□□□□ -0.71
CDX2-202ENST00000548877 RBFOX1Q9NWB1 397 aaKnown RBP10.59□□□□□ -0.71
CDX2-202ENST00000548877 AK6Q9Y3D8 172 aaKnown RBP10.59□□□□□ -0.71
CDX2-202ENST00000548877 ODAMA1E959 279 aa10.58□□□□□ -0.72
CDX2-202ENST00000548877 FAM172BPA6NC97 362 aa10.58□□□□□ -0.72
CDX2-202ENST00000548877 LINC01548A6NM66 108 aa10.58□□□□□ -0.72
CDX2-202ENST00000548877 ZNF729A6NN14 1252 aaPredicted RBP10.58□□□□□ -0.72
CDX2-202ENST00000548877 SYT7O43581 403 aa10.58□□□□□ -0.72
CDX2-202ENST00000548877 OCMP0CE72 109 aaPredicted RBP10.58□□□□□ -0.72
CDX2-202ENST00000548877 CGB3P0DN86 165 aa10.58□□□□□ -0.72
CDX2-202ENST00000548877 CGB7P0DN87 165 aa10.58□□□□□ -0.72
CDX2-202ENST00000548877 TMEM11P17152 192 aa10.58□□□□□ -0.72
CDX2-202ENST00000548877 ATF1P18846 271 aa10.58□□□□□ -0.72
CDX2-202ENST00000548877 DUSP1P28562 367 aa10.58□□□□□ -0.72
CDX2-202ENST00000548877 PTGFRP43088 359 aa10.58□□□□□ -0.72
CDX2-202ENST00000548877 GLIPR1P48060 266 aa10.58□□□□□ -0.72
CDX2-202ENST00000548877 NPBWR2P48146 333 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms