RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 LIMS4P0CW20 117 aa0.95□□□□□ -2.26
CCDC38-204ENST00000546816 MAGEA6P43360 314 aa0.95□□□□□ -2.26
CCDC38-204ENST00000546816 GABRA4P48169 554 aa0.95□□□□□ -2.26
CCDC38-204ENST00000546816 HADHBP55084 474 aaKnown RBP0.95□□□□□ -2.26
CCDC38-204ENST00000546816 OR2B6P58173 313 aa0.95□□□□□ -2.26
CCDC38-204ENST00000546816 FAM3AP98173 230 aa0.95□□□□□ -2.26
CCDC38-204ENST00000546816 TSPAN31Q12999 210 aa0.95□□□□□ -2.26
CCDC38-204ENST00000546816 HTR4Q13639 388 aa0.95□□□□□ -2.26
CCDC38-204ENST00000546816 PDGFRLQ15198 375 aa0.95□□□□□ -2.26
CCDC38-204ENST00000546816 SS18Q15532 418 aa0.95□□□□□ -2.26
CCDC38-204ENST00000546816 FAM229BQ4G0N7 80 aa0.95□□□□□ -2.26
CCDC38-204ENST00000546816 HENMT1Q5T8I9 393 aaKnown RBP0.95□□□□□ -2.26
CCDC38-204ENST00000546816 SDIM1Q6ZPB5 146 aa0.95□□□□□ -2.26
CCDC38-204ENST00000546816 MTERF4Q7Z6M4 381 aaKnown RBP0.95□□□□□ -2.26
CCDC38-204ENST00000546816 TCAIMQ8N3R3 496 aa0.95□□□□□ -2.26
CCDC38-204ENST00000546816 OR5D18Q8NGL1 313 aa0.95□□□□□ -2.26
CCDC38-204ENST00000546816 UPK3BQ9BT76 320 aa0.95□□□□□ -2.26
CCDC38-204ENST00000546816 C1QTNF6Q9BXI9 259 aa0.95□□□□□ -2.26
CCDC38-204ENST00000546816 DMAC2Q9NW81 257 aa0.95□□□□□ -2.26
CCDC38-204ENST00000546816 SCML1Q9UN30 329 aa0.95□□□□□ -2.26
CCDC38-204ENST00000546816 WASHC3Q9Y3C0 194 aa0.95□□□□□ -2.26
CCDC38-204ENST00000546816 HEY1Q9Y5J3 304 aa0.95□□□□□ -2.26
CCDC38-204ENST00000546816 TRPM3Q9HCF6 1732 aaPredicted RBP0.95□□□□□ -2.26
CCDC38-204ENST00000546816 EFCAB9A8MZ26 197 aa0.94□□□□□ -2.26
CCDC38-204ENST00000546816 H3BRN7 92 aa0.94□□□□□ -2.26
CCDC38-204ENST00000546816 PHYHO14832 338 aa0.94□□□□□ -2.26
CCDC38-204ENST00000546816 SYNGR1O43759 233 aa0.94□□□□□ -2.26
CCDC38-204ENST00000546816 UGT2B11O75310 529 aa0.94□□□□□ -2.26
CCDC38-204ENST00000546816 SNAP29O95721 258 aa0.94□□□□□ -2.26
CCDC38-204ENST00000546816 CRYGDP07320 174 aa0.94□□□□□ -2.26
CCDC38-204ENST00000546816 FBP1P09467 338 aa0.94□□□□□ -2.26
CCDC38-204ENST00000546816 IGHV3-30-3P0DP02 117 aa0.94□□□□□ -2.26
CCDC38-204ENST00000546816 ZNF7P17097 686 aaPredicted RBP0.94□□□□□ -2.26
CCDC38-204ENST00000546816 ATF1P18846 271 aa0.94□□□□□ -2.26
CCDC38-204ENST00000546816 BSPH1Q075Z2 132 aa0.94□□□□□ -2.26
CCDC38-204ENST00000546816 Q6ZSA8 131 aa0.94□□□□□ -2.26
CCDC38-204ENST00000546816 ZBTB8OSQ8IWT0 167 aa0.94□□□□□ -2.26
CCDC38-204ENST00000546816 C17orf78Q8N4C9 275 aa0.94□□□□□ -2.26
CCDC38-204ENST00000546816 YIPF7Q8N8F6 280 aa0.94□□□□□ -2.26
CCDC38-204ENST00000546816 SPERTQ8NA61 448 aa0.94□□□□□ -2.26
CCDC38-204ENST00000546816 OR4P4Q8NGL7 312 aa0.94□□□□□ -2.26
CCDC38-204ENST00000546816 ZNRF2Q8NHG8 242 aa0.94□□□□□ -2.26
CCDC38-204ENST00000546816 CCDC127Q96BQ5 260 aa0.94□□□□□ -2.26
CCDC38-204ENST00000546816 CAPZA3Q96KX2 299 aa0.94□□□□□ -2.26
CCDC38-204ENST00000546816 FAM210AQ96ND0 272 aa0.94□□□□□ -2.26
CCDC38-204ENST00000546816 CHST5Q9GZS9 411 aa0.94□□□□□ -2.26
CCDC38-204ENST00000546816 GTSF1LQ9H1H1 148 aa0.94□□□□□ -2.26
CCDC38-204ENST00000546816 SMDT1Q9H4I9 107 aa0.94□□□□□ -2.26
CCDC38-204ENST00000546816 C16orf95Q9H693 158 aa0.94□□□□□ -2.26
CCDC38-204ENST00000546816 TAS2R9Q9NYW1 312 aa0.94□□□□□ -2.26
CCDC38-204ENST00000546816 COMMD9Q9P000 198 aa0.94□□□□□ -2.26
CCDC38-204ENST00000546816 LAMB2P55268 1798 aa0.93□□□□□ -2.26
CCDC38-204ENST00000546816 ADAMTSL1Q8N6G6 1762 aa0.93□□□□□ -2.26
CCDC38-204ENST00000546816 PTPRJQ12913 1337 aa0.93□□□□□ -2.26
CCDC38-204ENST00000546816 IGKV2-29A2NJV5 120 aaPredicted RBP0.93□□□□□ -2.26
CCDC38-204ENST00000546816 ZNF860A6NHJ4 632 aa0.93□□□□□ -2.26
CCDC38-204ENST00000546816 B4DEV8 164 aa0.93□□□□□ -2.26
CCDC38-204ENST00000546816 K7ERQ8 282 aa0.93□□□□□ -2.26
CCDC38-204ENST00000546816 SULT1C2O00338 296 aa0.93□□□□□ -2.26
CCDC38-204ENST00000546816 TOR1AO14656 332 aa0.93□□□□□ -2.26
CCDC38-204ENST00000546816 YKT6O15498 198 aa0.93□□□□□ -2.26
CCDC38-204ENST00000546816 TNFAIP8O95379 198 aa0.93□□□□□ -2.26
CCDC38-204ENST00000546816 ANGP03950 147 aaKnown RBP0.93□□□□□ -2.26
CCDC38-204ENST00000546816 CPMP14384 443 aa0.93□□□□□ -2.26
CCDC38-204ENST00000546816 PSMA1P25786 263 aaKnown RBP0.93□□□□□ -2.26
CCDC38-204ENST00000546816 GABRA3P34903 492 aa0.93□□□□□ -2.26
CCDC38-204ENST00000546816 SPAM1P38567 509 aa0.93□□□□□ -2.26
CCDC38-204ENST00000546816 AKR1C2P52895 323 aa0.93□□□□□ -2.26
CCDC38-204ENST00000546816 GABARAPL2P60520 117 aa0.93□□□□□ -2.26
CCDC38-204ENST00000546816 GTF2BQ00403 316 aa0.93□□□□□ -2.26
CCDC38-204ENST00000546816 ZNF117Q03924 483 aa0.93□□□□□ -2.26
CCDC38-204ENST00000546816 USF2Q15853 346 aaPredicted RBP0.93□□□□□ -2.26
CCDC38-204ENST00000546816 MRPL51Q4U2R6 128 aaKnown RBP0.93□□□□□ -2.26
CCDC38-204ENST00000546816 CENPWQ5EE01 88 aa0.93□□□□□ -2.26
CCDC38-204ENST00000546816 RBM48Q5RL73 367 aaKnown RBP0.93□□□□□ -2.26
CCDC38-204ENST00000546816 TIMM23BQ5SRD1 257 aa0.93□□□□□ -2.26
CCDC38-204ENST00000546816 OR5K1Q8NHB7 308 aa0.93□□□□□ -2.26
CCDC38-204ENST00000546816 CYTH2Q99418 400 aa0.93□□□□□ -2.26
CCDC38-204ENST00000546816 EBNA1BP2Q99848 306 aaKnown RBP0.93□□□□□ -2.26
CCDC38-204ENST00000546816 ZNF251Q9BRH9 671 aa0.93□□□□□ -2.26
CCDC38-204ENST00000546816 UGT2B28Q9BY64 529 aa0.93□□□□□ -2.26
CCDC38-204ENST00000546816 OR52A5Q9H2C5 316 aa0.93□□□□□ -2.26
CCDC38-204ENST00000546816 TMEM216Q9P0N5 145 aa0.93□□□□□ -2.26
CCDC38-204ENST00000546816 DNMT1P26358 1616 aaKnown RBP0.93□□□□□ -2.26
CCDC38-204ENST00000546816 NUP153P49790 1475 aaKnown RBP0.92□□□□□ -2.26
CCDC38-204ENST00000546816 MUC21A0A0G2JKD1 596 aa0.92□□□□□ -2.26
CCDC38-204ENST00000546816 A0A0J9YX75 114 aa0.92□□□□□ -2.26
CCDC38-204ENST00000546816 MUC21A0A140T8X8 626 aa0.92□□□□□ -2.26
CCDC38-204ENST00000546816 K7EQS6 105 aa0.92□□□□□ -2.26
CCDC38-204ENST00000546816 CDK14O94921 469 aa0.92□□□□□ -2.26
CCDC38-204ENST00000546816 OR4A8P0C604 315 aa0.92□□□□□ -2.26
CCDC38-204ENST00000546816 NQO1P15559 274 aaKnown RBP0.92□□□□□ -2.26
CCDC38-204ENST00000546816 GADD45AP24522 165 aa0.92□□□□□ -2.26
CCDC38-204ENST00000546816 RCVRNP35243 200 aa0.92□□□□□ -2.26
CCDC38-204ENST00000546816 ACTR1BP42025 376 aa0.92□□□□□ -2.26
CCDC38-204ENST00000546816 DYNLL1P63167 89 aaKnown RBP0.92□□□□□ -2.26
CCDC38-204ENST00000546816 DEFA6Q01524 100 aa0.92□□□□□ -2.26
CCDC38-204ENST00000546816 HES1Q14469 280 aa0.92□□□□□ -2.26
CCDC38-204ENST00000546816 SYCP1Q15431 976 aa0.92□□□□□ -2.26
CCDC38-204ENST00000546816 ERMNQ8TAM6 284 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms