RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 Q6ZT83 130 aa0.68□□□□□ -2.3
ATM-220ENST00000533526 OR11H1Q8NG94 326 aa0.68□□□□□ -2.3
ATM-220ENST00000533526 ZNRF2Q8NHG8 242 aa0.68□□□□□ -2.3
ATM-220ENST00000533526 LHFPL5Q8TAF8 219 aa0.68□□□□□ -2.3
ATM-220ENST00000533526 FAM45AQ8TCE6 357 aa0.68□□□□□ -2.3
ATM-220ENST00000533526 IFT81Q8WYA0 676 aa0.68□□□□□ -2.3
ATM-220ENST00000533526 MGLLQ99685 303 aa0.68□□□□□ -2.3
ATM-220ENST00000533526 HSPB9Q9BQS6 159 aa0.68□□□□□ -2.3
ATM-220ENST00000533526 MRPL32Q9BYC8 188 aaKnown RBP0.68□□□□□ -2.3
ATM-220ENST00000533526 XKR8Q9H6D3 395 aa0.68□□□□□ -2.3
ATM-220ENST00000533526 AMMECR1Q9Y4X0 333 aaPredicted RBP0.68□□□□□ -2.3
ATM-220ENST00000533526 PUS1Q9Y606 427 aaKnown RBP eCLIP0.68□□□□□ -2.3
ATM-220ENST00000533526 RAB3GAP2Q9H2M9 1393 aa0.68□□□□□ -2.3
ATM-220ENST00000533526 ATG2BQ96BY7 2078 aa0.68□□□□□ -2.3
ATM-220ENST00000533526 TRPM6Q9BX84 2022 aa0.67□□□□□ -2.3
ATM-220ENST00000533526 ATAD5Q96QE3 1844 aa0.67□□□□□ -2.3
ATM-220ENST00000533526 IGHV3-15A0A0B4J1V0 119 aa0.67□□□□□ -2.3
ATM-220ENST00000533526 IGHV3-73A0A0B4J1V6 119 aa0.67□□□□□ -2.3
ATM-220ENST00000533526 TMEM235A6NFC5 223 aa0.67□□□□□ -2.3
ATM-220ENST00000533526 C8orf87E5RJ46 101 aa0.67□□□□□ -2.3
ATM-220ENST00000533526 H3BPC8 53 aa0.67□□□□□ -2.3
ATM-220ENST00000533526 J3QLI3 93 aa0.67□□□□□ -2.3
ATM-220ENST00000533526 J3QQQ9 107 aa0.67□□□□□ -2.3
ATM-220ENST00000533526 CYTH3O43739 400 aa0.67□□□□□ -2.3
ATM-220ENST00000533526 SHOX2O60902 331 aaPredicted RBP0.67□□□□□ -2.3
ATM-220ENST00000533526 LY6HO94772 140 aa0.67□□□□□ -2.3
ATM-220ENST00000533526 CTSEP14091 401 aa0.67□□□□□ -2.3
ATM-220ENST00000533526 CCNOP22674 350 aa0.67□□□□□ -2.3
ATM-220ENST00000533526 ATP6V0CP27449 155 aa0.67□□□□□ -2.3
ATM-220ENST00000533526 RPL26P61254 145 aaKnown RBP0.67□□□□□ -2.3
ATM-220ENST00000533526 RELAQ04206 551 aa0.67□□□□□ -2.3
ATM-220ENST00000533526 UAP1Q16222 522 aaPredicted RBP0.67□□□□□ -2.3
ATM-220ENST00000533526 TPRXLQ17RH7 258 aa0.67□□□□□ -2.3
ATM-220ENST00000533526 EBLN2Q6P2I7 272 aa0.67□□□□□ -2.3
ATM-220ENST00000533526 AGTRAPQ6RW13 159 aa0.67□□□□□ -2.3
ATM-220ENST00000533526 MRPL52Q86TS9 123 aaKnown RBP0.67□□□□□ -2.3
ATM-220ENST00000533526 OR4X2Q8NGF9 303 aa0.67□□□□□ -2.3
ATM-220ENST00000533526 OR5D18Q8NGL1 313 aa0.67□□□□□ -2.3
ATM-220ENST00000533526 PGLYRP3Q96LB9 341 aa0.67□□□□□ -2.3
ATM-220ENST00000533526 BCL7BQ9BQE9 202 aa0.67□□□□□ -2.3
ATM-220ENST00000533526 ZNF426Q9BUY5 554 aa0.67□□□□□ -2.3
ATM-220ENST00000533526 ZNF471Q9BX82 626 aaPredicted RBP0.67□□□□□ -2.3
ATM-220ENST00000533526 C1QTNF6Q9BXI9 259 aa0.67□□□□□ -2.3
ATM-220ENST00000533526 PECRQ9BY49 303 aa0.67□□□□□ -2.3
ATM-220ENST00000533526 FBXL15Q9H469 300 aa0.67□□□□□ -2.3
ATM-220ENST00000533526 GOLPH3Q9H4A6 298 aa0.67□□□□□ -2.3
ATM-220ENST00000533526 PRO2289Q9P1D8 64 aa0.67□□□□□ -2.3
ATM-220ENST00000533526 RPL26L1Q9UNX3 145 aaKnown RBP0.67□□□□□ -2.3
ATM-220ENST00000533526 ZNF638Q14966 1978 aaKnown RBP0.66□□□□□ -2.3
ATM-220ENST00000533526 ADAMTSL1Q8N6G6 1762 aa0.66□□□□□ -2.3
ATM-220ENST00000533526 C2orf74A8MZ97 194 aa0.66□□□□□ -2.3
ATM-220ENST00000533526 LYNX1P0DP58 116 aa0.66□□□□□ -2.3
ATM-220ENST00000533526 GADD45AP24522 165 aa0.66□□□□□ -2.3
ATM-220ENST00000533526 RCVRNP35243 200 aa0.66□□□□□ -2.3
ATM-220ENST00000533526 MAGEA12P43365 314 aa0.66□□□□□ -2.3
ATM-220ENST00000533526 ZNF90Q03938 601 aa0.66□□□□□ -2.3
ATM-220ENST00000533526 BSXQ3C1V8 233 aa0.66□□□□□ -2.3
ATM-220ENST00000533526 TIMM23BQ5SRD1 257 aa0.66□□□□□ -2.3
ATM-220ENST00000533526 HENMT1Q5T8I9 393 aaKnown RBP0.66□□□□□ -2.3
ATM-220ENST00000533526 RASL11AQ6T310 242 aa0.66□□□□□ -2.3
ATM-220ENST00000533526 Q6ZRN7 208 aaPredicted RBP0.66□□□□□ -2.3
ATM-220ENST00000533526 Q6ZTI0 123 aa0.66□□□□□ -2.3
ATM-220ENST00000533526 SLC35F6Q8N357 371 aa0.66□□□□□ -2.3
ATM-220ENST00000533526 RNF133Q8WVZ7 376 aa0.66□□□□□ -2.3
ATM-220ENST00000533526 TMIGD2Q96BF3 282 aa0.66□□□□□ -2.3
ATM-220ENST00000533526 MED18Q9BUE0 208 aa0.66□□□□□ -2.3
ATM-220ENST00000533526 SPZ1Q9BXG8 430 aa0.66□□□□□ -2.3
ATM-220ENST00000533526 CDCA4Q9BXL8 241 aa0.66□□□□□ -2.3
ATM-220ENST00000533526 TAS2R13Q9NYV9 303 aa0.66□□□□□ -2.3
ATM-220ENST00000533526 CLEC2DQ9UHP7 191 aa0.66□□□□□ -2.3
ATM-220ENST00000533526 KMT2BQ9UMN6 2715 aaPredicted RBP0.66□□□□□ -2.3
ATM-220ENST00000533526 DNMT1P26358 1616 aaKnown RBP0.65□□□□□ -2.31
ATM-220ENST00000533526 LINC00862A6NCI5 91 aa0.65□□□□□ -2.31
ATM-220ENST00000533526 EPPINO95925 133 aa0.65□□□□□ -2.31
ATM-220ENST00000533526 PEBP1P30086 187 aaKnown RBP0.65□□□□□ -2.31
ATM-220ENST00000533526 XRCC4Q13426 336 aa0.65□□□□□ -2.31
ATM-220ENST00000533526 C18orf21Q32NC0 220 aaPredicted RBP0.65□□□□□ -2.31
ATM-220ENST00000533526 C2orf91Q6ZV80 131 aa0.65□□□□□ -2.31
ATM-220ENST00000533526 GLT6D1Q7Z4J2 308 aa0.65□□□□□ -2.31
ATM-220ENST00000533526 MTERF4Q7Z6M4 381 aaKnown RBP0.65□□□□□ -2.31
ATM-220ENST00000533526 COA5Q86WW8 74 aa0.65□□□□□ -2.31
ATM-220ENST00000533526 LRRC6Q86X45 466 aa0.65□□□□□ -2.31
ATM-220ENST00000533526 OR2Y1Q8NGV0 311 aa0.65□□□□□ -2.31
ATM-220ENST00000533526 OR5K1Q8NHB7 308 aa0.65□□□□□ -2.31
ATM-220ENST00000533526 FNDC9Q8TBE3 224 aa0.65□□□□□ -2.31
ATM-220ENST00000533526 SUN5Q8TC36 379 aa0.65□□□□□ -2.31
ATM-220ENST00000533526 MRAP2Q96G30 205 aa0.65□□□□□ -2.31
ATM-220ENST00000533526 CATSPER2Q96P56 530 aa0.65□□□□□ -2.31
ATM-220ENST00000533526 RETNLBQ9BQ08 111 aa0.65□□□□□ -2.31
ATM-220ENST00000533526 TIMM21Q9BVV7 248 aa0.65□□□□□ -2.31
ATM-220ENST00000533526 CYSTM1Q9H1C7 97 aa0.65□□□□□ -2.31
ATM-220ENST00000533526 GTSF1LQ9H1H1 148 aa0.65□□□□□ -2.31
ATM-220ENST00000533526 OR51E2Q9H255 320 aa0.65□□□□□ -2.31
ATM-220ENST00000533526 C11orf1Q9H5F2 150 aa0.65□□□□□ -2.31
ATM-220ENST00000533526 C16orf95Q9H693 158 aa0.65□□□□□ -2.31
ATM-220ENST00000533526 DMAC2Q9NW81 257 aa0.65□□□□□ -2.31
ATM-220ENST00000533526 COMMD9Q9P000 198 aa0.65□□□□□ -2.31
ATM-220ENST00000533526 TMEM216Q9P0N5 145 aa0.65□□□□□ -2.31
ATM-220ENST00000533526 SNX12Q9UMY4 172 aa0.65□□□□□ -2.31
ATM-220ENST00000533526 TNIKQ9UKE5 1360 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms