RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 CCNB2O95067 398 aa5.15□□□□□ -1.59
CSDE1-213ENST00000530784 SOX14O95416 240 aa5.15□□□□□ -1.59
CSDE1-213ENST00000530784 H2BFMP0C1H6 154 aa5.15□□□□□ -1.59
CSDE1-213ENST00000530784 CLUP10909 449 aa5.15□□□□□ -1.59
CSDE1-213ENST00000530784 ZNF3P17036 446 aa5.15□□□□□ -1.59
CSDE1-213ENST00000530784 SNU13P55769 128 aaKnown RBP5.15□□□□□ -1.59
CSDE1-213ENST00000530784 CAV3P56539 151 aa5.15□□□□□ -1.59
CSDE1-213ENST00000530784 ZNF121P58317 390 aaPredicted RBP5.15□□□□□ -1.59
CSDE1-213ENST00000530784 PRDX4Q13162 271 aa5.15□□□□□ -1.59
CSDE1-213ENST00000530784 DGUOKQ16854 277 aa5.15□□□□□ -1.59
CSDE1-213ENST00000530784 LRRC75BQ2VPJ9 315 aa5.15□□□□□ -1.59
CSDE1-213ENST00000530784 KLHL12Q53G59 568 aa5.15□□□□□ -1.59
CSDE1-213ENST00000530784 HSP90B2PQ58FF3 399 aa5.15□□□□□ -1.59
CSDE1-213ENST00000530784 SAMD4BQ5PRF9 694 aaKnown RBP5.15□□□□□ -1.59
CSDE1-213ENST00000530784 KPRPQ5T749 579 aaPredicted RBP5.15□□□□□ -1.59
CSDE1-213ENST00000530784 C9orf66Q5T8R8 295 aa5.15□□□□□ -1.59
CSDE1-213ENST00000530784 ERI1Q8IV48 349 aaKnown RBP5.15□□□□□ -1.59
CSDE1-213ENST00000530784 PGAM4Q8N0Y7 254 aa5.15□□□□□ -1.59
CSDE1-213ENST00000530784 OR5D13Q8NGL4 314 aa5.15□□□□□ -1.59
CSDE1-213ENST00000530784 OR4Q3Q8NH05 313 aa5.15□□□□□ -1.59
CSDE1-213ENST00000530784 RNF133Q8WVZ7 376 aa5.15□□□□□ -1.59
CSDE1-213ENST00000530784 OR5P3Q8WZ94 311 aa5.15□□□□□ -1.59
CSDE1-213ENST00000530784 RPL3LQ92901 407 aaKnown RBP5.15□□□□□ -1.59
CSDE1-213ENST00000530784 DUS3LQ96G46 650 aaKnown RBP5.15□□□□□ -1.59
CSDE1-213ENST00000530784 GAFA1Q96PS6 74 aa5.15□□□□□ -1.59
CSDE1-213ENST00000530784 SSX3Q99909 188 aa5.15□□□□□ -1.59
CSDE1-213ENST00000530784 RANBP3Q9H6Z4 567 aaPredicted RBP5.15□□□□□ -1.59
CSDE1-213ENST00000530784 RAB18Q9NP72 206 aa5.15□□□□□ -1.59
CSDE1-213ENST00000530784 ARMC1Q9NVT9 282 aa5.15□□□□□ -1.59
CSDE1-213ENST00000530784 SIGLEC9Q9Y336 463 aa5.15□□□□□ -1.59
CSDE1-213ENST00000530784 MAB21L2Q9Y586 359 aa5.15□□□□□ -1.59
CSDE1-213ENST00000530784 MPC1Q9Y5U8 109 aa5.15□□□□□ -1.59
CSDE1-213ENST00000530784 TRRAPQ9Y4A5 3859 aa5.15□□□□□ -1.59
CSDE1-213ENST00000530784 C13orf42A0A1B0GVH6 325 aa5.14□□□□□ -1.59
CSDE1-213ENST00000530784 RPL37AP8A6NKH3 93 aa5.14□□□□□ -1.59
CSDE1-213ENST00000530784 FAM183AA6NL82 134 aa5.14□□□□□ -1.59
CSDE1-213ENST00000530784 OR2AT4A6NND4 320 aa5.14□□□□□ -1.59
CSDE1-213ENST00000530784 ZNF850A8MQ14 1090 aa5.14□□□□□ -1.59
CSDE1-213ENST00000530784 ANGPTL7O43827 346 aa5.14□□□□□ -1.59
CSDE1-213ENST00000530784 CST4P01036 141 aa5.14□□□□□ -1.59
CSDE1-213ENST00000530784 TFF1P04155 84 aa5.14□□□□□ -1.59
CSDE1-213ENST00000530784 LYNP07948 512 aa5.14□□□□□ -1.59
CSDE1-213ENST00000530784 GLRA1P23415 457 aa5.14□□□□□ -1.59
CSDE1-213ENST00000530784 ACKR3P25106 362 aa5.14□□□□□ -1.59
CSDE1-213ENST00000530784 KIR2DS4P43632 304 aa5.14□□□□□ -1.59
CSDE1-213ENST00000530784 GABRA2P47869 451 aa5.14□□□□□ -1.59
CSDE1-213ENST00000530784 EFNB2P52799 333 aa5.14□□□□□ -1.59
CSDE1-213ENST00000530784 GPR50Q13585 617 aa5.14□□□□□ -1.59
CSDE1-213ENST00000530784 LY6EQ16553 131 aa5.14□□□□□ -1.59
CSDE1-213ENST00000530784 LINC01590Q5TEZ4 76 aa5.14□□□□□ -1.59
CSDE1-213ENST00000530784 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.14□□□□□ -1.59
CSDE1-213ENST00000530784 TMEM185AQ8NFB2 350 aa5.14□□□□□ -1.59
CSDE1-213ENST00000530784 ANGPTL6Q8NI99 470 aa5.14□□□□□ -1.59
CSDE1-213ENST00000530784 FAM81AQ8TBF8 368 aa5.14□□□□□ -1.59
CSDE1-213ENST00000530784 TEX47Q8TBZ9 253 aa5.14□□□□□ -1.59
CSDE1-213ENST00000530784 PIGCQ92535 297 aa5.14□□□□□ -1.59
CSDE1-213ENST00000530784 RORBQ92753 470 aa5.14□□□□□ -1.59
CSDE1-213ENST00000530784 RNF170Q96K19 258 aa5.14□□□□□ -1.59
CSDE1-213ENST00000530784 AMELYQ99218 206 aa5.14□□□□□ -1.59
CSDE1-213ENST00000530784 MOB1AQ9H8S9 216 aa5.14□□□□□ -1.59
CSDE1-213ENST00000530784 ELL3Q9HB65 397 aaPredicted RBP5.14□□□□□ -1.59
CSDE1-213ENST00000530784 CMC2Q9NRP2 79 aa5.14□□□□□ -1.59
CSDE1-213ENST00000530784 ZNF319Q9P2F9 582 aa5.14□□□□□ -1.59
CSDE1-213ENST00000530784 UBQLN2Q9UHD9 624 aa5.14□□□□□ -1.59
CSDE1-213ENST00000530784 FOXJ3Q9UPW0 622 aa5.14□□□□□ -1.59
CSDE1-213ENST00000530784 IGKV1D-17A0A075B6S4 117 aa5.13□□□□□ -1.59
CSDE1-213ENST00000530784 A4D1N5 150 aa5.13□□□□□ -1.59
CSDE1-213ENST00000530784 H3BN98 237 aa5.13□□□□□ -1.59
CSDE1-213ENST00000530784 RHBDL1O75783 438 aa5.13□□□□□ -1.59
CSDE1-213ENST00000530784 GLCEO94923 617 aa5.13□□□□□ -1.59
CSDE1-213ENST00000530784 PRB2P02812 416 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-213ENST00000530784 PSG2P11465 335 aa5.13□□□□□ -1.59
CSDE1-213ENST00000530784 ATP6V1B2P21281 511 aa5.13□□□□□ -1.59
CSDE1-213ENST00000530784 PAICSP22234 425 aaKnown RBP5.13□□□□□ -1.59
CSDE1-213ENST00000530784 MAGEA2P43356 314 aa5.13□□□□□ -1.59
CSDE1-213ENST00000530784 GPM6AP51674 278 aa5.13□□□□□ -1.59
CSDE1-213ENST00000530784 RIDAP52758 137 aaKnown RBP5.13□□□□□ -1.59
CSDE1-213ENST00000530784 PPP1R8Q12972 351 aaKnown RBP5.13□□□□□ -1.59
CSDE1-213ENST00000530784 AANATQ16613 207 aa5.13□□□□□ -1.59
CSDE1-213ENST00000530784 MICAQ29983 383 aa5.13□□□□□ -1.59
CSDE1-213ENST00000530784 HCP5Q6MZN7 132 aa5.13□□□□□ -1.59
CSDE1-213ENST00000530784 ZNRF1Q8ND25 227 aa5.13□□□□□ -1.59
CSDE1-213ENST00000530784 OR5K1Q8NHB7 308 aa5.13□□□□□ -1.59
CSDE1-213ENST00000530784 MRAPQ8TCY5 172 aa5.13□□□□□ -1.59
CSDE1-213ENST00000530784 THEM6Q8WUY1 208 aa5.13□□□□□ -1.59
CSDE1-213ENST00000530784 C17orf50Q8WW18 174 aa5.13□□□□□ -1.59
CSDE1-213ENST00000530784 RFT1Q96AA3 541 aa5.13□□□□□ -1.59
CSDE1-213ENST00000530784 FGF23Q9GZV9 251 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-213ENST00000530784 FAM107BQ9H098 131 aa5.13□□□□□ -1.59
CSDE1-213ENST00000530784 OR51V1Q9H2C8 321 aa5.13□□□□□ -1.59
CSDE1-213ENST00000530784 REEP1Q9H902 201 aa5.13□□□□□ -1.59
CSDE1-213ENST00000530784 MED4Q9NPJ6 270 aa5.13□□□□□ -1.59
CSDE1-213ENST00000530784 C19orf12Q9NSK7 152 aa5.13□□□□□ -1.59
CSDE1-213ENST00000530784 ZNF222Q9UK12 451 aa5.13□□□□□ -1.59
CSDE1-213ENST00000530784 SAMHD1Q9Y3Z3 626 aaKnown RBP5.13□□□□□ -1.59
CSDE1-213ENST00000530784 U3KQV3 271 aa5.13□□□□□ -1.59
CSDE1-213ENST00000530784 A0A087X0K7 114 aa5.12□□□□□ -1.59
CSDE1-213ENST00000530784 IGHV3-16A0A0C4DH30 117 aa5.12□□□□□ -1.59
CSDE1-213ENST00000530784 A0A1W2PRV1 198 aa5.12□□□□□ -1.59
CSDE1-213ENST00000530784 OR5B21A6NL26 309 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms