RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 LRRC45Q96CN5 670 aa1.41□□□□□ -2.18
CHD1-207ENST00000511628 UGT2B28Q9BY64 529 aa1.41□□□□□ -2.18
CHD1-207ENST00000511628 C11orf49Q9H6J7 331 aa1.41□□□□□ -2.18
CHD1-207ENST00000511628 KMT2EQ8IZD2 1858 aa1.41□□□□□ -2.18
CHD1-207ENST00000511628 PCNX2A6NKB5 2137 aa1.4□□□□□ -2.18
CHD1-207ENST00000511628 COL18A1P39060 1754 aa1.4□□□□□ -2.19
CHD1-207ENST00000511628 CEP170Q5SW79 1584 aa1.4□□□□□ -2.19
CHD1-207ENST00000511628 K7EQS6 105 aa1.4□□□□□ -2.19
CHD1-207ENST00000511628 CYTH3O43739 400 aa1.4□□□□□ -2.19
CHD1-207ENST00000511628 SLC25A20O43772 301 aa1.4□□□□□ -2.19
CHD1-207ENST00000511628 ORM1P02763 201 aa1.4□□□□□ -2.19
CHD1-207ENST00000511628 CTSGP08311 255 aa1.4□□□□□ -2.19
CHD1-207ENST00000511628 GADD45AP24522 165 aa1.4□□□□□ -2.19
CHD1-207ENST00000511628 CRATP43155 626 aa1.4□□□□□ -2.19
CHD1-207ENST00000511628 GABARAPL2P60520 117 aa1.4□□□□□ -2.19
CHD1-207ENST00000511628 GTF2BQ00403 316 aa1.4□□□□□ -2.19
CHD1-207ENST00000511628 FOXF1Q12946 379 aa1.4□□□□□ -2.19
CHD1-207ENST00000511628 TRMT12Q53H54 448 aaKnown RBP1.4□□□□□ -2.19
CHD1-207ENST00000511628 MESTQ5EB52 335 aa1.4□□□□□ -2.19
CHD1-207ENST00000511628 SPATA31B1PQ5VZV4 182 aa1.4□□□□□ -2.19
CHD1-207ENST00000511628 TTC33Q6PID6 262 aaPredicted RBP1.4□□□□□ -2.19
CHD1-207ENST00000511628 FUNDC1Q8IVP5 155 aa1.4□□□□□ -2.19
CHD1-207ENST00000511628 CD200R1Q8TD46 325 aa1.4□□□□□ -2.19
CHD1-207ENST00000511628 LLPHQ9BRT6 129 aaKnown RBP1.4□□□□□ -2.19
CHD1-207ENST00000511628 HIGD2AQ9BW72 106 aa1.4□□□□□ -2.19
CHD1-207ENST00000511628 GTSF1LQ9H1H1 148 aa1.4□□□□□ -2.19
CHD1-207ENST00000511628 WDR54Q9H977 334 aa1.4□□□□□ -2.19
CHD1-207ENST00000511628 MCTS1Q9ULC4 181 aaKnown RBP1.4□□□□□ -2.19
CHD1-207ENST00000511628 ITGB4P16144 1822 aa1.39□□□□□ -2.19
CHD1-207ENST00000511628 IGSF23A1L1A6 192 aa1.39□□□□□ -2.19
CHD1-207ENST00000511628 B4DEV8 164 aa1.39□□□□□ -2.19
CHD1-207ENST00000511628 SLC31A1O15431 190 aa1.39□□□□□ -2.19
CHD1-207ENST00000511628 COCHO43405 550 aa1.39□□□□□ -2.19
CHD1-207ENST00000511628 ATP6V1G2O95670 118 aa1.39□□□□□ -2.19
CHD1-207ENST00000511628 CDS2O95674 445 aa1.39□□□□□ -2.19
CHD1-207ENST00000511628 ORM2P19652 201 aa1.39□□□□□ -2.19
CHD1-207ENST00000511628 PSMA1P25786 263 aaKnown RBP1.39□□□□□ -2.19
CHD1-207ENST00000511628 CRABP1P29762 137 aa1.39□□□□□ -2.19
CHD1-207ENST00000511628 PSMB3P49720 205 aa1.39□□□□□ -2.19
CHD1-207ENST00000511628 LINC00313P59037 77 aa1.39□□□□□ -2.19
CHD1-207ENST00000511628 C1DQ13901 141 aaKnown RBP1.39□□□□□ -2.19
CHD1-207ENST00000511628 FAM229BQ4G0N7 80 aa1.39□□□□□ -2.19
CHD1-207ENST00000511628 PYCR3Q53H96 274 aa1.39□□□□□ -2.19
CHD1-207ENST00000511628 Q6ZRU5 148 aa1.39□□□□□ -2.19
CHD1-207ENST00000511628 OR5L1Q8NGL2 311 aa1.39□□□□□ -2.19
CHD1-207ENST00000511628 MFSD8Q8NHS3 518 aa1.39□□□□□ -2.19
CHD1-207ENST00000511628 ZCCHC13Q8WW36 166 aaKnown RBP1.39□□□□□ -2.19
CHD1-207ENST00000511628 PPWD1Q96BP3 646 aaKnown RBP1.39□□□□□ -2.19
CHD1-207ENST00000511628 GALMQ96C23 342 aa1.39□□□□□ -2.19
CHD1-207ENST00000511628 PPCDCQ96CD2 204 aa1.39□□□□□ -2.19
CHD1-207ENST00000511628 C7orf50Q9BRJ6 194 aaKnown RBP1.39□□□□□ -2.19
CHD1-207ENST00000511628 IMP3Q9NV31 184 aaKnown RBP1.39□□□□□ -2.19
CHD1-207ENST00000511628 WASHC3Q9Y3C0 194 aa1.39□□□□□ -2.19
CHD1-207ENST00000511628 MRPS16Q9Y3D3 137 aaKnown RBP1.39□□□□□ -2.19
CHD1-207ENST00000511628 PUS1Q9Y606 427 aaKnown RBP eCLIP1.39□□□□□ -2.19
CHD1-207ENST00000511628 ADAMTSL1Q8N6G6 1762 aa1.39□□□□□ -2.19
CHD1-207ENST00000511628 TRPM6Q9BX84 2022 aa1.39□□□□□ -2.19
CHD1-207ENST00000511628 ZNF638Q14966 1978 aaKnown RBP1.38□□□□□ -2.19
CHD1-207ENST00000511628 LOC102725191A0A1B0GVB3 256 aa1.38□□□□□ -2.19
CHD1-207ENST00000511628 METTL15A6NJ78 407 aa1.38□□□□□ -2.19
CHD1-207ENST00000511628 C17orf98A8MV24 154 aa1.38□□□□□ -2.19
CHD1-207ENST00000511628 FTCDNL1E5RQL4 147 aa1.38□□□□□ -2.19
CHD1-207ENST00000511628 KLRC4-KLRK1H3BQV0 150 aa1.38□□□□□ -2.19
CHD1-207ENST00000511628 M0QYV0 167 aa1.38□□□□□ -2.19
CHD1-207ENST00000511628 LIN7AO14910 233 aaPredicted RBP1.38□□□□□ -2.19
CHD1-207ENST00000511628 ATP8B1O43520 1251 aa1.38□□□□□ -2.19
CHD1-207ENST00000511628 PSCAO43653 123 aa1.38□□□□□ -2.19
CHD1-207ENST00000511628 ZNF73O43830 326 aaPredicted RBP1.38□□□□□ -2.19
CHD1-207ENST00000511628 ARL6IP5O75915 188 aa1.38□□□□□ -2.19
CHD1-207ENST00000511628 CRYGDP07320 174 aa1.38□□□□□ -2.19
CHD1-207ENST00000511628 PET100P0DJ07 73 aa1.38□□□□□ -2.19
CHD1-207ENST00000511628 ACTBP60709 375 aa1.38□□□□□ -2.19
CHD1-207ENST00000511628 ACTG1P63261 375 aa1.38□□□□□ -2.19
CHD1-207ENST00000511628 SMAGPQ0VAQ4 97 aa1.38□□□□□ -2.19
CHD1-207ENST00000511628 CST6Q15828 149 aa1.38□□□□□ -2.19
CHD1-207ENST00000511628 EXOC3L4Q17RC7 722 aa1.38□□□□□ -2.19
CHD1-207ENST00000511628 LRRC26Q2I0M4 334 aa1.38□□□□□ -2.19
CHD1-207ENST00000511628 KRTAP21-2Q3LI59 83 aa1.38□□□□□ -2.19
CHD1-207ENST00000511628 SPATA24Q86W54 205 aa1.38□□□□□ -2.19
CHD1-207ENST00000511628 SLC13A5Q86YT5 568 aaPredicted RBP1.38□□□□□ -2.19
CHD1-207ENST00000511628 ZBTB8OSQ8IWT0 167 aa1.38□□□□□ -2.19
CHD1-207ENST00000511628 OR10P1Q8NGE3 313 aa1.38□□□□□ -2.19
CHD1-207ENST00000511628 OR5K1Q8NHB7 308 aa1.38□□□□□ -2.19
CHD1-207ENST00000511628 TNFAIP8L1Q8WVP5 186 aa1.38□□□□□ -2.19
CHD1-207ENST00000511628 DNAJB3Q8WWF6 145 aa1.38□□□□□ -2.19
CHD1-207ENST00000511628 RBP7Q96R05 134 aa1.38□□□□□ -2.19
CHD1-207ENST00000511628 EBNA1BP2Q99848 306 aaKnown RBP1.38□□□□□ -2.19
CHD1-207ENST00000511628 C16orf95Q9H693 158 aa1.38□□□□□ -2.19
CHD1-207ENST00000511628 MRPL16Q9NX20 251 aaKnown RBP1.38□□□□□ -2.19
CHD1-207ENST00000511628 TMEM216Q9P0N5 145 aa1.38□□□□□ -2.19
CHD1-207ENST00000511628 LINC00527Q9UJ94 153 aa1.38□□□□□ -2.19
CHD1-207ENST00000511628 HMCN1Q96RW7 5635 aa1.38□□□□□ -2.19
CHD1-207ENST00000511628 RAD50Q92878 1312 aa1.38□□□□□ -2.19
CHD1-207ENST00000511628 FBN1P35555 2871 aaKnown RBP1.37□□□□□ -2.19
CHD1-207ENST00000511628 DAPL1A0PJW8 107 aa1.37□□□□□ -2.19
CHD1-207ENST00000511628 GOLGA6L10A6NI86 522 aa1.37□□□□□ -2.19
CHD1-207ENST00000511628 F5H5T6 163 aa1.37□□□□□ -2.19
CHD1-207ENST00000511628 H3BSA7 217 aa1.37□□□□□ -2.19
CHD1-207ENST00000511628 OR13C7P0DN81 318 aa1.37□□□□□ -2.19
CHD1-207ENST00000511628 AGTR1P30556 359 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms