RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 TRAM1Q15629 374 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 HMGN3Q15651 99 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 RAB11BQ15907 218 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 LY6EQ16553 131 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 LRRC75BQ2VPJ9 315 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 HLA-DRB5Q30154 266 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 ATAD3CQ5T2N8 411 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 TRAPPC6BQ86SZ2 158 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 TMEM219Q86XT9 240 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 OR5H6Q8NGV6 325 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 SPATA3Q8NHX4 192 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 ZNF596Q8TC21 504 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 LGALS14Q8TCE9 139 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 CCDC107Q8WV48 283 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 SSMEM1Q8WWF3 244 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 CFHR4Q92496 578 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 FCGR1BQ92637 280 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 THRSPQ92748 146 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 FAM3DQ96BQ1 224 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 CPNE2Q96FN4 548 aaPredicted RBP5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 C5orf30Q96GV9 206 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 CHCHD6Q9BRQ6 235 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 CLEC7AQ9BXN2 247 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 MEGF9Q9H1U4 602 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 NCOR1P1Q9H4R4 102 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 IDI2-AS1Q9NZ38 188 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 PSG11Q9UQ72 335 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 IGKV1D-8A0A087WSZ0 117 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 SH2D7A6NKC9 451 aaPredicted RBP5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 IFITM5A6NNB3 132 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 VGLL3A8MV65 326 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 TRIM77I1YAP6 450 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 AIPO00170 330 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 RAB27BO00194 218 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 ZNF780AO75290 641 aaPredicted RBP5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 ARL6IP5O75915 188 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 NDUFA7O95182 113 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 HBZP02008 142 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 CSTBP04080 98 aaKnown RBP5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 AMY1AP04745 511 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 UBBP0CG47 229 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 CD36P16671 472 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 GALP22466 123 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 CD24P25063 80 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 KCNJ3P48549 501 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 ZNF134P52741 427 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 RAG2P55895 527 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 PROK1P58294 105 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 ACTG1P63261 375 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 HABP2Q14520 560 aaPredicted RBP5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 TPTE2P1Q5T6R2 138 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 GLT8D1Q68CQ7 371 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 C16orf87Q6PH81 154 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 OR2W3Q7Z3T1 314 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 ODF3L1Q8IXM7 274 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 ABHD12Q8N2K0 398 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 TSPAN14Q8NG11 270 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 OR10V1Q8NGI7 309 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 WIPF2Q8TF74 440 aaPredicted RBP5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 ST6GALNAC6Q969X2 333 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 MRPS24Q96EL2 167 aaKnown RBP5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 ARHGAP5-AS1Q96IT6 56 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 SSX3Q99909 188 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 FAAP24Q9BTP7 215 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 KRTAP4-11Q9BYQ6 195 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 GAL3ST2Q9H3Q3 398 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 ZNF702PQ9H963 129 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 ZMAT3Q9HA38 289 aaKnown RBP5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 ETAA1Q9NY74 926 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 STEAP1Q9UHE8 339 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 AK3Q9UIJ7 227 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 TCF19Q9Y242 345 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 TBL2Q9Y4P3 447 aaKnown RBP5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 PEX16Q9Y5Y5 336 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 POMT1Q9Y6A1 747 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 V9GY05 133 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 MGAM2Q2M2H8 2515 aa5.77□□□□□ -1.49
TOPBP1-207ENST00000509162 J3QR06 171 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 TNFAIP8O95379 198 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 RAB3BP20337 219 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 FUT3P21217 361 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 NFYBP25208 207 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 SDC2P34741 201 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 ALDH3B2P48448 385 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 VEGFCP49767 419 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 LGALS4P56470 323 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 NCS1P62166 190 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 MXD1Q05195 221 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 SCGB2A2Q13296 93 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 DYNC1I2Q13409 638 aaKnown RBP5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 BLMHQ13867 455 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 SSX2Q16385 188 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 C2orf76Q3KRA6 126 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 SFXN4Q6P4A7 337 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 OR52L2PQ8NGH6 319 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 OR13F1Q8NGS4 319 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 OR13D1Q8NGV5 346 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 LINC01006Q8NI28 216 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 MAFIPQ8WZ33 124 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 PECRQ9BY49 303 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms