RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 LINC00596Q86U02 117 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 BOD1L2Q8IYS8 172 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 SLC25A40Q8TBP6 338 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 ERGIC1Q969X5 290 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 MEGF10Q96KG7 1140 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 WFIKKN1Q96NZ8 548 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 RTL8AQ9BWD3 113 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 C1orf123Q9NWV4 160 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 SMPXQ9UHP9 88 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 KIF25Q9UIL4 384 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 TRBV6-7A0A0A0MS04 114 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 KANTRA0A1W2PQU2 76 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 MPTX1A8MV57 137 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 J3QT63 122 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 KLK10O43240 276 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 BCL2L11O43521 198 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 DUSP1P28562 367 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 FXYD4P59646 89 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 UBA52P62987 128 aaKnown RBP9.83□□□□□ -0.84
USP46-204ENST00000503060 IL13RA2Q14627 380 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 IGFBP7Q16270 282 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 SRSF7Q16629 238 aaKnown RBP eCLIP9.83□□□□□ -0.84
USP46-204ENST00000503060 Q6ZS92 163 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 MOB3AQ96BX8 217 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 PIK3IP1Q96FE7 263 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 OR10C1Q96KK4 312 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 C2orf50Q96LR7 162 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 Q9N2K0 584 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 PPP1R3CQ9UQK1 317 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 RBMXL2O75526 392 aaKnown RBP9.83□□□□□ -0.84
USP46-204ENST00000503060 TNFSF13O75888 250 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 AGFG2O95081 481 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 CYB5R3P00387 301 aaPredicted RBP9.83□□□□□ -0.84
USP46-204ENST00000503060 IGKV3-15P01624 115 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 HOXB5P09067 269 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 DAOP14920 347 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 MUC1P15941 1255 aaPredicted RBP9.83□□□□□ -0.84
USP46-204ENST00000503060 UCP3P55916 312 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 PIGPP57054 158 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 HERV-K104P63124 156 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 ABCA11PQ4W5N1 156 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 COMMD7Q86VX2 200 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 POC1AQ8NBT0 407 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 INO80EQ8NBZ0 244 aaPredicted RBP9.83□□□□□ -0.84
USP46-204ENST00000503060 OR1J1Q8NGS3 322 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 RCC1LQ96I51 464 aaKnown RBP9.83□□□□□ -0.84
USP46-204ENST00000503060 RNF126Q9BV68 326 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 C1QTNF6Q9BXI9 259 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 PROCRQ9UNN8 238 aa9.83□□□□□ -0.84
USP46-204ENST00000503060 H0YIZ8 118 aa9.82□□□□□ -0.84
USP46-204ENST00000503060 ST8SIA3O43173 380 aa9.82□□□□□ -0.84
USP46-204ENST00000503060 EIF3GO75821 320 aaKnown RBP eCLIP9.82□□□□□ -0.84
USP46-204ENST00000503060 DFFBO76075 338 aa9.82□□□□□ -0.84
USP46-204ENST00000503060 AADACP22760 399 aa9.82□□□□□ -0.84
USP46-204ENST00000503060 PAX6P26367 422 aa9.82□□□□□ -0.84
USP46-204ENST00000503060 RBM39Q14498 530 aaKnown RBP9.82□□□□□ -0.84
USP46-204ENST00000503060 WDR86Q86TI4 376 aa9.82□□□□□ -0.84
USP46-204ENST00000503060 ZNF610Q8N9Z0 462 aa9.82□□□□□ -0.84
USP46-204ENST00000503060 SUMF2Q8NBJ7 301 aa9.82□□□□□ -0.84
USP46-204ENST00000503060 DCUN1D4Q92564 292 aa9.82□□□□□ -0.84
USP46-204ENST00000503060 STARD4Q96DR4 205 aa9.82□□□□□ -0.84
USP46-204ENST00000503060 NAA60Q9H7X0 242 aa9.82□□□□□ -0.84
USP46-204ENST00000503060 URGCP-MRPS24S4R325 110 aa9.82□□□□□ -0.84
USP46-204ENST00000503060 RIF1Q5UIP0 2472 aaKnown RBP9.82□□□□□ -0.84
USP46-204ENST00000503060 LRP5LA4QPB2 252 aa9.82□□□□□ -0.84
USP46-204ENST00000503060 MBD3L4A6NDZ8 208 aaPredicted RBP9.82□□□□□ -0.84
USP46-204ENST00000503060 MBD3L3A6NE82 208 aaPredicted RBP9.82□□□□□ -0.84
USP46-204ENST00000503060 MBD3L5A6NJ08 208 aaPredicted RBP9.82□□□□□ -0.84
USP46-204ENST00000503060 IQCF6A8MYZ5 107 aa9.82□□□□□ -0.84
USP46-204ENST00000503060 HSPB6O14558 160 aa9.82□□□□□ -0.84
USP46-204ENST00000503060 WDR1O75083 606 aa9.82□□□□□ -0.84
USP46-204ENST00000503060 CGAP01215 116 aa9.82□□□□□ -0.84
USP46-204ENST00000503060 NMBP08949 121 aa9.82□□□□□ -0.84
USP46-204ENST00000503060 RRASP10301 218 aa9.82□□□□□ -0.84
USP46-204ENST00000503060 SELEP16581 610 aa9.82□□□□□ -0.84
USP46-204ENST00000503060 HERV-K104P61576 105 aa9.82□□□□□ -0.84
USP46-204ENST00000503060 PSG7Q13046 419 aa9.82□□□□□ -0.84
USP46-204ENST00000503060 IL15RAQ13261 267 aa9.82□□□□□ -0.84
USP46-204ENST00000503060 SEM1Q6ZVN7 128 aa9.82□□□□□ -0.84
USP46-204ENST00000503060 CXorf67Q86X51 503 aaPredicted RBP9.82□□□□□ -0.84
USP46-204ENST00000503060 MBD3L2Q8NHZ7 208 aaPredicted RBP9.82□□□□□ -0.84
USP46-204ENST00000503060 SFT2D1Q8WV19 159 aa9.82□□□□□ -0.84
USP46-204ENST00000503060 ADAT1Q9BUB4 502 aaKnown RBP9.82□□□□□ -0.84
USP46-204ENST00000503060 C1orf43Q9BWL3 253 aa9.82□□□□□ -0.84
USP46-204ENST00000503060 KCNIP3Q9Y2W7 256 aa9.82□□□□□ -0.84
USP46-204ENST00000503060 ZFHX2Q9C0A1 2572 aaPredicted RBP9.81□□□□□ -0.84
USP46-204ENST00000503060 CACNA1GO43497 2377 aa9.81□□□□□ -0.84
USP46-204ENST00000503060 RLN2P04090 185 aa9.81□□□□□ -0.84
USP46-204ENST00000503060 LYL1P12980 280 aa9.81□□□□□ -0.84
USP46-204ENST00000503060 PHLDA2Q53GA4 152 aa9.81□□□□□ -0.84
USP46-204ENST00000503060 MBNL2Q5VZF2 373 aaKnown RBP9.81□□□□□ -0.84
USP46-204ENST00000503060 PRSS54Q6PEW0 395 aa9.81□□□□□ -0.84
USP46-204ENST00000503060 ASCL5Q7RTU5 278 aa9.81□□□□□ -0.84
USP46-204ENST00000503060 SLC16A13Q7RTY0 426 aa9.81□□□□□ -0.84
USP46-204ENST00000503060 RBMXL3Q8N7X1 1067 aaKnown RBP9.81□□□□□ -0.84
USP46-204ENST00000503060 SNIP1Q8TAD8 396 aaKnown RBP9.81□□□□□ -0.84
USP46-204ENST00000503060 RTN4IP1Q8WWV3 396 aaPredicted RBP9.81□□□□□ -0.84
USP46-204ENST00000503060 GALNT14Q96FL9 552 aa9.81□□□□□ -0.84
USP46-204ENST00000503060 GGACTQ9BVM4 153 aa9.81□□□□□ -0.84
USP46-204ENST00000503060 RHOFQ9HBH0 211 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms