RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 MLLT11Q13015 90 aaPredicted RBP12.72□□□□□ -0.37
VIM-208ENST00000497849 ATXN7L3Q14CW9 347 aaPredicted RBP12.72□□□□□ -0.37
VIM-208ENST00000497849 LIPKQ5VXJ0 399 aa12.72□□□□□ -0.37
VIM-208ENST00000497849 IZUMO1Q8IYV9 350 aa12.72□□□□□ -0.37
VIM-208ENST00000497849 OR13C3Q8NGS6 347 aa12.72□□□□□ -0.37
VIM-208ENST00000497849 ST6GALNAC6Q969X2 333 aa12.72□□□□□ -0.37
VIM-208ENST00000497849 SMIM19Q96E16 107 aa12.72□□□□□ -0.37
VIM-208ENST00000497849 PGLYRP3Q96LB9 341 aa12.72□□□□□ -0.37
VIM-208ENST00000497849 ZNF580Q9UK33 172 aa12.72□□□□□ -0.37
VIM-208ENST00000497849 VSIG4Q9Y279 399 aa12.72□□□□□ -0.37
VIM-208ENST00000497849 IGKV1-12A0A0C4DH73 117 aa12.71□□□□□ -0.37
VIM-208ENST00000497849 A0A1W2PPE3 182 aa12.71□□□□□ -0.37
VIM-208ENST00000497849 A0A1W2PPK0 400 aa12.71□□□□□ -0.37
VIM-208ENST00000497849 CCDC160A6NGH7 325 aa12.71□□□□□ -0.37
VIM-208ENST00000497849 HSD17B6O14756 317 aa12.71□□□□□ -0.37
VIM-208ENST00000497849 IGKV1D-12P01611 117 aa12.71□□□□□ -0.37
VIM-208ENST00000497849 PPIFP30405 207 aaKnown RBP12.71□□□□□ -0.37
VIM-208ENST00000497849 REG1BP48304 166 aa12.71□□□□□ -0.37
VIM-208ENST00000497849 GNG10P50151 68 aa12.71□□□□□ -0.37
VIM-208ENST00000497849 SLURP1P55000 103 aa12.71□□□□□ -0.37
VIM-208ENST00000497849 TAS2R43P59537 309 aa12.71□□□□□ -0.37
VIM-208ENST00000497849 RPS11P62280 158 aaKnown RBP eCLIP12.71□□□□□ -0.37
VIM-208ENST00000497849 INSL4Q14641 139 aa12.71□□□□□ -0.37
VIM-208ENST00000497849 HAGHQ16775 308 aa12.71□□□□□ -0.37
VIM-208ENST00000497849 GPR107Q5VW38 600 aa12.71□□□□□ -0.37
VIM-208ENST00000497849 Q6P435 159 aa12.71□□□□□ -0.37
VIM-208ENST00000497849 ACSM6Q6P461 480 aa12.71□□□□□ -0.37
VIM-208ENST00000497849 MOB3BQ86TA1 216 aa12.71□□□□□ -0.37
VIM-208ENST00000497849 CLVS1Q8IUQ0 354 aaPredicted RBP12.71□□□□□ -0.37
VIM-208ENST00000497849 OR13A1Q8NGR1 328 aa12.71□□□□□ -0.37
VIM-208ENST00000497849 OR2T10Q8NGZ9 312 aa12.71□□□□□ -0.37
VIM-208ENST00000497849 TSEN15Q8WW01 171 aaKnown RBP12.71□□□□□ -0.37
VIM-208ENST00000497849 TMEM203Q969S6 136 aa12.71□□□□□ -0.37
VIM-208ENST00000497849 RBMXL1Q96E39 390 aaKnown RBP12.71□□□□□ -0.37
VIM-208ENST00000497849 YIPF6Q96EC8 236 aa12.71□□□□□ -0.37
VIM-208ENST00000497849 S1PR3Q99500 378 aa12.71□□□□□ -0.37
VIM-208ENST00000497849 CALYQ9NYX4 217 aa12.71□□□□□ -0.37
VIM-208ENST00000497849 IDI2-AS1Q9NZ38 188 aa12.71□□□□□ -0.37
VIM-208ENST00000497849 OR6C3Q9NZP0 311 aa12.71□□□□□ -0.37
VIM-208ENST00000497849 IGKV1-9A0A0C4DH69 117 aa12.7□□□□□ -0.38
VIM-208ENST00000497849 SLC33A1O00400 549 aaPredicted RBP12.7□□□□□ -0.38
VIM-208ENST00000497849 CYB5AP00167 134 aa12.7□□□□□ -0.38
VIM-208ENST00000497849 ZNF44P15621 663 aa12.7□□□□□ -0.38
VIM-208ENST00000497849 CD36P16671 472 aa12.7□□□□□ -0.38
VIM-208ENST00000497849 MTNR1BP49286 362 aa12.7□□□□□ -0.38
VIM-208ENST00000497849 RBP2P50120 134 aa12.7□□□□□ -0.38
VIM-208ENST00000497849 ATP1B3P54709 279 aa12.7□□□□□ -0.38
VIM-208ENST00000497849 RPS25P62851 125 aaKnown RBP12.7□□□□□ -0.38
VIM-208ENST00000497849 TPBGQ13641 420 aa12.7□□□□□ -0.38
VIM-208ENST00000497849 LYPD6Q86Y78 171 aa12.7□□□□□ -0.38
VIM-208ENST00000497849 DNAAF1Q8NEP3 725 aa12.7□□□□□ -0.38
VIM-208ENST00000497849 ARPC1AQ92747 370 aa12.7□□□□□ -0.38
VIM-208ENST00000497849 UFD1Q92890 307 aa12.7□□□□□ -0.38
VIM-208ENST00000497849 RASL11BQ9BPW5 248 aa12.7□□□□□ -0.38
VIM-208ENST00000497849 TMED9Q9BVK6 235 aa12.7□□□□□ -0.38
VIM-208ENST00000497849 ALX4Q9H161 411 aaPredicted RBP12.7□□□□□ -0.38
VIM-208ENST00000497849 LINC00574Q9H8X3 128 aa12.7□□□□□ -0.38
VIM-208ENST00000497849 DHDHQ9UQ10 334 aa12.7□□□□□ -0.38
VIM-208ENST00000497849 CEPT1Q9Y6K0 416 aa12.7□□□□□ -0.38
VIM-208ENST00000497849 KMT2AQ03164 3969 aa12.7□□□□□ -0.38
VIM-208ENST00000497849 NPIPB11E5RHQ5 1161 aa12.69□□□□□ -0.38
VIM-208ENST00000497849 NOL3O60936 208 aaKnown RBP12.69□□□□□ -0.38
VIM-208ENST00000497849 IL1AP01583 271 aa12.69□□□□□ -0.38
VIM-208ENST00000497849 CPEP16870 476 aa12.69□□□□□ -0.38
VIM-208ENST00000497849 ZNF20P17024 532 aa12.69□□□□□ -0.38
VIM-208ENST00000497849 SOX6P35712 828 aa12.69□□□□□ -0.38
VIM-208ENST00000497849 GLP1RP43220 463 aa12.69□□□□□ -0.38
VIM-208ENST00000497849 SCN1BQ07699 218 aa12.69□□□□□ -0.38
VIM-208ENST00000497849 SSX1Q16384 188 aa12.69□□□□□ -0.38
VIM-208ENST00000497849 LTC4SQ16873 150 aa12.69□□□□□ -0.38
VIM-208ENST00000497849 TMEM104Q8NE00 496 aa12.69□□□□□ -0.38
VIM-208ENST00000497849 OR10X1Q8NGY0 326 aa12.69□□□□□ -0.38
VIM-208ENST00000497849 GPR148Q8TDV2 347 aa12.69□□□□□ -0.38
VIM-208ENST00000497849 DGCR14Q96DF8 476 aaKnown RBP12.69□□□□□ -0.38
VIM-208ENST00000497849 FUNDC2Q9BWH2 189 aa12.69□□□□□ -0.38
VIM-208ENST00000497849 RBM38Q9H0Z9 239 aaKnown RBP12.69□□□□□ -0.38
VIM-208ENST00000497849 KIAA1456Q9P272 454 aa12.69□□□□□ -0.38
VIM-208ENST00000497849 TRBV5-5A0A0J9YX44 114 aa12.68□□□□□ -0.38
VIM-208ENST00000497849 ZNF736B4DX44 427 aaPredicted RBP12.68□□□□□ -0.38
VIM-208ENST00000497849 SERPINA3P01011 423 aa12.68□□□□□ -0.38
VIM-208ENST00000497849 IGLV1-40P01703 118 aa12.68□□□□□ -0.38
VIM-208ENST00000497849 GAPDHP04406 335 aaKnown RBP12.68□□□□□ -0.38
VIM-208ENST00000497849 IFNA6P05013 189 aa12.68□□□□□ -0.38
VIM-208ENST00000497849 OCM2P0CE71 109 aa12.68□□□□□ -0.38
VIM-208ENST00000497849 OR5H8P0DN80 308 aa12.68□□□□□ -0.38
VIM-208ENST00000497849 F2RL1P55085 397 aa12.68□□□□□ -0.38
VIM-208ENST00000497849 MTCP1P56278 107 aa12.68□□□□□ -0.38
VIM-208ENST00000497849 ZP1P60852 638 aa12.68□□□□□ -0.38
VIM-208ENST00000497849 PDZK1IP1Q13113 114 aa12.68□□□□□ -0.38
VIM-208ENST00000497849 TMEM65Q6PI78 240 aa12.68□□□□□ -0.38
VIM-208ENST00000497849 HAPLN4Q86UW8 402 aa12.68□□□□□ -0.38
VIM-208ENST00000497849 ANKRD13BQ86YJ7 626 aa12.68□□□□□ -0.38
VIM-208ENST00000497849 SGPP2Q8IWX5 399 aa12.68□□□□□ -0.38
VIM-208ENST00000497849 ZNF565Q8N9K5 539 aa12.68□□□□□ -0.38
VIM-208ENST00000497849 CCDC54Q8NEL0 328 aa12.68□□□□□ -0.38
VIM-208ENST00000497849 RFESDQ8TAC1 157 aa12.68□□□□□ -0.38
VIM-208ENST00000497849 IL17DQ8TAD2 202 aa12.68□□□□□ -0.38
VIM-208ENST00000497849 LINC00476Q8WZB0 136 aa12.68□□□□□ -0.38
VIM-208ENST00000497849 OR14A2Q96R54 314 aa12.68□□□□□ -0.38
VIM-208ENST00000497849 OR51J1Q9H342 316 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms