RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 GOLGA6L10A6NI86 522 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 B4DEV8 164 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 FTCDNL1E5RQL4 147 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 KLRC4-KLRK1H3BQV0 150 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 CETN3O15182 167 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 DENRO43583 198 aaKnown RBP1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 SLC25A20O43772 301 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 YEATS4O95619 227 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 FBP1P09467 338 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 PET100P0DJ07 73 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 F8A1P23610 371 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 PSMA1P25786 263 aaKnown RBP1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 ADORA1P30542 326 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 GRPRP30550 384 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 AGTR1P30556 359 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 PSMB3P49720 205 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 SULT1A2P50226 295 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 GABARAPL2P60520 117 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 TNFRSF9Q07011 255 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 C1DQ13901 141 aaKnown RBP1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 CLEC12BQ2HXU8 276 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 TBC1D28Q2M2D7 210 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 TRMT12Q53H54 448 aaKnown RBP1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 SDHAF4Q5VUM1 108 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 NOXRED1Q6NXP6 359 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 DRAM2Q6UX65 266 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 RIBC1Q8N443 379 aaPredicted RBP1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 ZFAND2AQ8N6M9 145 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 TMEM75Q8N9X5 138 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 OR10D4PQ8NGN7 298 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 CD200R1Q8TD46 325 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 TNFAIP8L1Q8WVP5 186 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 ZNF514Q96K75 400 aaPredicted RBP1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 RBP7Q96R05 134 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 OR8B2Q96RD0 313 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 EBNA1BP2Q99848 306 aaKnown RBP1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 UPF3BQ9BZI7 483 aaKnown RBP1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 BCL2L14Q9BZR8 327 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 GTSF1LQ9H1H1 148 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 C11orf49Q9H6J7 331 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 UBQLN4Q9NRR5 601 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 VPREB3Q9UKI3 123 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 NUP153P49790 1475 aaKnown RBP1.24□□□□□ -2.21
HMGB1P30-201ENST00000492455 E7EQL1 145 aa1.24□□□□□ -2.21
HMGB1P30-201ENST00000492455 K7EQS6 105 aa1.24□□□□□ -2.21
HMGB1P30-201ENST00000492455 M0QYV0 167 aa1.24□□□□□ -2.21
HMGB1P30-201ENST00000492455 CCRL2O00421 344 aa1.24□□□□□ -2.21
HMGB1P30-201ENST00000492455 ITGB1BP1O14713 200 aa1.24□□□□□ -2.21
HMGB1P30-201ENST00000492455 ATP8B1O43520 1251 aa1.24□□□□□ -2.21
HMGB1P30-201ENST00000492455 ATP6V1G2O95670 118 aa1.24□□□□□ -2.21
HMGB1P30-201ENST00000492455 OCMP0CE72 109 aaPredicted RBP1.24□□□□□ -2.21
HMGB1P30-201ENST00000492455 CRABP1P29762 137 aa1.24□□□□□ -2.21
HMGB1P30-201ENST00000492455 GABRA3P34903 492 aa1.24□□□□□ -2.21
HMGB1P30-201ENST00000492455 COILP38432 576 aaPredicted RBP1.24□□□□□ -2.21
HMGB1P30-201ENST00000492455 RPL14P50914 215 aaKnown RBP1.24□□□□□ -2.21
HMGB1P30-201ENST00000492455 CLDN12P56749 244 aa1.24□□□□□ -2.21
HMGB1P30-201ENST00000492455 MAP3K7CLP57077 242 aa1.24□□□□□ -2.21
HMGB1P30-201ENST00000492455 DEFA6Q01524 100 aa1.24□□□□□ -2.21
HMGB1P30-201ENST00000492455 BSPH1Q075Z2 132 aa1.24□□□□□ -2.21
HMGB1P30-201ENST00000492455 TSPAN31Q12999 210 aa1.24□□□□□ -2.21
HMGB1P30-201ENST00000492455 SPATA31B1PQ5VZV4 182 aa1.24□□□□□ -2.21
HMGB1P30-201ENST00000492455 SMARCD3Q6STE5 483 aa1.24□□□□□ -2.21
HMGB1P30-201ENST00000492455 Q6ZRU5 148 aa1.24□□□□□ -2.21
HMGB1P30-201ENST00000492455 FUNDC1Q8IVP5 155 aa1.24□□□□□ -2.21
HMGB1P30-201ENST00000492455 DNAJB3Q8WWF6 145 aa1.24□□□□□ -2.21
HMGB1P30-201ENST00000492455 LLPHQ9BRT6 129 aaKnown RBP1.24□□□□□ -2.21
HMGB1P30-201ENST00000492455 ZNF426Q9BUY5 554 aa1.24□□□□□ -2.21
HMGB1P30-201ENST00000492455 C1QTNF6Q9BXI9 259 aa1.24□□□□□ -2.21
HMGB1P30-201ENST00000492455 METTL9Q9H1A3 318 aa1.24□□□□□ -2.21
HMGB1P30-201ENST00000492455 IMP3Q9NV31 184 aaKnown RBP1.24□□□□□ -2.21
HMGB1P30-201ENST00000492455 LINC00527Q9UJ94 153 aa1.24□□□□□ -2.21
HMGB1P30-201ENST00000492455 TP53TG1Q9Y2A0 90 aa1.24□□□□□ -2.21
HMGB1P30-201ENST00000492455 WASHC3Q9Y3C0 194 aa1.24□□□□□ -2.21
HMGB1P30-201ENST00000492455 CRB1P82279 1406 aa1.23□□□□□ -2.21
HMGB1P30-201ENST00000492455 BRD4O60885 1362 aaPredicted RBP1.23□□□□□ -2.21
HMGB1P30-201ENST00000492455 LOC102725191A0A1B0GVB3 256 aa1.23□□□□□ -2.21
HMGB1P30-201ENST00000492455 DAPL1A0PJW8 107 aa1.23□□□□□ -2.21
HMGB1P30-201ENST00000492455 IGSF23A1L1A6 192 aa1.23□□□□□ -2.21
HMGB1P30-201ENST00000492455 SDHAF1A6NFY7 115 aa1.23□□□□□ -2.21
HMGB1P30-201ENST00000492455 METTL15A6NJ78 407 aa1.23□□□□□ -2.21
HMGB1P30-201ENST00000492455 F5H5T6 163 aa1.23□□□□□ -2.21
HMGB1P30-201ENST00000492455 ARL6IP5O75915 188 aa1.23□□□□□ -2.21
HMGB1P30-201ENST00000492455 CTSGP08311 255 aa1.23□□□□□ -2.21
HMGB1P30-201ENST00000492455 EMP2P54851 167 aa1.23□□□□□ -2.21
HMGB1P30-201ENST00000492455 LINC00313P59037 77 aa1.23□□□□□ -2.21
HMGB1P30-201ENST00000492455 CST6Q15828 149 aa1.23□□□□□ -2.21
HMGB1P30-201ENST00000492455 MAPK14Q16539 360 aa1.23□□□□□ -2.21
HMGB1P30-201ENST00000492455 HLA-DRB5Q30154 266 aa1.23□□□□□ -2.21
HMGB1P30-201ENST00000492455 DNAL1Q4LDG9 190 aa1.23□□□□□ -2.21
HMGB1P30-201ENST00000492455 MESTQ5EB52 335 aa1.23□□□□□ -2.21
HMGB1P30-201ENST00000492455 PLEKHG7Q6ZR37 379 aa1.23□□□□□ -2.21
HMGB1P30-201ENST00000492455 TCF24Q7RTU0 167 aa1.23□□□□□ -2.21
HMGB1P30-201ENST00000492455 CD302Q8IX05 232 aa1.23□□□□□ -2.21
HMGB1P30-201ENST00000492455 MSRB3Q8IXL7 192 aa1.23□□□□□ -2.21
HMGB1P30-201ENST00000492455 OR10P1Q8NGE3 313 aa1.23□□□□□ -2.21
HMGB1P30-201ENST00000492455 OR51H1Q8NH63 302 aa1.23□□□□□ -2.21
HMGB1P30-201ENST00000492455 MFSD8Q8NHS3 518 aa1.23□□□□□ -2.21
HMGB1P30-201ENST00000492455 LMX1AQ8TE12 382 aa1.23□□□□□ -2.21
HMGB1P30-201ENST00000492455 PPCDCQ96CD2 204 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms