RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 ZNF286AQ9HBT8 521 aa2.32□□□□□ -2.04
XRN1-213ENST00000489241 LINC00527Q9UJ94 153 aa2.32□□□□□ -2.04
XRN1-213ENST00000489241 PHLDA3Q9Y5J5 127 aa2.32□□□□□ -2.04
XRN1-213ENST00000489241 OR51B4Q9Y5P0 310 aa2.32□□□□□ -2.04
XRN1-213ENST00000489241 SNX10Q9Y5X0 201 aa2.32□□□□□ -2.04
XRN1-213ENST00000489241 MAP3K5Q99683 1374 aa2.32□□□□□ -2.04
XRN1-213ENST00000489241 TRIP11Q15643 1979 aa2.32□□□□□ -2.04
XRN1-213ENST00000489241 IGHV3OR15-7A0A075B7D8 119 aa2.31□□□□□ -2.04
XRN1-213ENST00000489241 H0Y980 276 aa2.31□□□□□ -2.04
XRN1-213ENST00000489241 SLC16A4O15374 487 aa2.31□□□□□ -2.04
XRN1-213ENST00000489241 AHSA1O95433 338 aa2.31□□□□□ -2.04
XRN1-213ENST00000489241 HBZP02008 142 aa2.31□□□□□ -2.04
XRN1-213ENST00000489241 TYMSP04818 313 aa2.31□□□□□ -2.04
XRN1-213ENST00000489241 LINC00614P0C842 121 aa2.31□□□□□ -2.04
XRN1-213ENST00000489241 CXCL2P19875 107 aa2.31□□□□□ -2.04
XRN1-213ENST00000489241 CXCL3P19876 107 aa2.31□□□□□ -2.04
XRN1-213ENST00000489241 PRPS1L1P21108 318 aa2.31□□□□□ -2.04
XRN1-213ENST00000489241 PSMB3P49720 205 aa2.31□□□□□ -2.04
XRN1-213ENST00000489241 H2BFSP57053 126 aa2.31□□□□□ -2.04
XRN1-213ENST00000489241 DAD1P61803 113 aa2.31□□□□□ -2.04
XRN1-213ENST00000489241 BIKQ13323 160 aa2.31□□□□□ -2.04
XRN1-213ENST00000489241 BCL2A1Q16548 175 aa2.31□□□□□ -2.04
XRN1-213ENST00000489241 Q6ZQT7 251 aa2.31□□□□□ -2.04
XRN1-213ENST00000489241 PAGE2Q7Z2X7 111 aa2.31□□□□□ -2.04
XRN1-213ENST00000489241 Q8N402 240 aa2.31□□□□□ -2.04
XRN1-213ENST00000489241 OR10D3Q8NH80 312 aa2.31□□□□□ -2.04
XRN1-213ENST00000489241 ERMNQ8TAM6 284 aa2.31□□□□□ -2.04
XRN1-213ENST00000489241 CYGBQ8WWM9 190 aa2.31□□□□□ -2.04
XRN1-213ENST00000489241 TRIB3Q96RU7 358 aa2.31□□□□□ -2.04
XRN1-213ENST00000489241 CDCA4Q9BXL8 241 aa2.31□□□□□ -2.04
XRN1-213ENST00000489241 KCNIP2Q9NS61 270 aa2.31□□□□□ -2.04
XRN1-213ENST00000489241 PARVAQ9NVD7 372 aa2.31□□□□□ -2.04
XRN1-213ENST00000489241 OR5V1Q9UGF6 321 aa2.31□□□□□ -2.04
XRN1-213ENST00000489241 RPUSD1Q9UJJ7 312 aaKnown RBP2.31□□□□□ -2.04
XRN1-213ENST00000489241 ZNF443Q9Y2A4 671 aaPredicted RBP2.31□□□□□ -2.04
XRN1-213ENST00000489241 LINC00588Q9Y4M8 146 aa2.31□□□□□ -2.04
XRN1-213ENST00000489241 U3KQK5 164 aa2.31□□□□□ -2.04
XRN1-213ENST00000489241 H3BSA7 217 aa2.3□□□□□ -2.04
XRN1-213ENST00000489241 CXCR6O00574 342 aa2.3□□□□□ -2.04
XRN1-213ENST00000489241 PFDN6O15212 129 aa2.3□□□□□ -2.04
XRN1-213ENST00000489241 SSNA1O43805 119 aa2.3□□□□□ -2.04
XRN1-213ENST00000489241 CRTAPO75718 401 aaPredicted RBP2.3□□□□□ -2.04
XRN1-213ENST00000489241 IGHV3-53P01767 116 aa2.3□□□□□ -2.04
XRN1-213ENST00000489241 ATP5G1P05496 136 aa2.3□□□□□ -2.04
XRN1-213ENST00000489241 GUSBP08236 651 aa2.3□□□□□ -2.04
XRN1-213ENST00000489241 KRT7P08729 469 aa2.3□□□□□ -2.04
XRN1-213ENST00000489241 ORM2P19652 201 aa2.3□□□□□ -2.04
XRN1-213ENST00000489241 CRABP2P29373 138 aa2.3□□□□□ -2.04
XRN1-213ENST00000489241 DEFA6Q01524 100 aa2.3□□□□□ -2.04
XRN1-213ENST00000489241 APOFQ13790 326 aa2.3□□□□□ -2.04
XRN1-213ENST00000489241 IGFBP7Q16270 282 aa2.3□□□□□ -2.04
XRN1-213ENST00000489241 LYPD1Q8N2G4 141 aa2.3□□□□□ -2.04
XRN1-213ENST00000489241 OR51H1Q8NH63 302 aa2.3□□□□□ -2.04
XRN1-213ENST00000489241 HAVCR2Q8TDQ0 301 aa2.3□□□□□ -2.04
XRN1-213ENST00000489241 RNF133Q8WVZ7 376 aa2.3□□□□□ -2.04
XRN1-213ENST00000489241 OTUB2Q96DC9 234 aa2.3□□□□□ -2.04
XRN1-213ENST00000489241 RTBDNQ9BSG5 229 aaPredicted RBP2.3□□□□□ -2.04
XRN1-213ENST00000489241 TIPINQ9BVW5 301 aa2.3□□□□□ -2.04
XRN1-213ENST00000489241 GNB1LQ9BYB4 327 aa2.3□□□□□ -2.04
XRN1-213ENST00000489241 DERL2Q9GZP9 239 aa2.3□□□□□ -2.04
XRN1-213ENST00000489241 FGFR1OP2Q9NVK5 253 aa2.3□□□□□ -2.04
XRN1-213ENST00000489241 POLR3HQ9Y535 204 aaPredicted RBP2.3□□□□□ -2.04
XRN1-213ENST00000489241 R4GN34 69 aa2.3□□□□□ -2.04
XRN1-213ENST00000489241 SCN4AP35499 1836 aa2.3□□□□□ -2.04
XRN1-213ENST00000489241 A0A1W2PP64 1363 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 ABCC11Q96J66 1382 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 TRBV24-1A0A075B6N3 115 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 IGKV1D-37A0A075B6S9 117 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 VGLL3A8MV65 326 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 C21orf140B9A014 251 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 LRRN3E7EW58 273 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 C15orf65H3BRN8 121 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 K7EQS6 105 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 LECT2O14960 151 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 KRTAP5-8O75690 187 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 IGHMP01871 453 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 APOEP02649 317 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 S100A6P06703 90 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 FBP1P09467 338 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 OR13C7P0DN81 318 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 GABRA3P34903 492 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 FOXA1P55317 472 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 LINC00313P59037 77 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 MAGOHP61326 146 aaKnown RBP2.29□□□□□ -2.04
XRN1-213ENST00000489241 HPCAP84074 193 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 FLI1Q01543 452 aaPredicted RBP2.29□□□□□ -2.04
XRN1-213ENST00000489241 ITGB3BPQ13352 177 aaPredicted RBP2.29□□□□□ -2.04
XRN1-213ENST00000489241 PDGFRLQ15198 375 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 SLC9A3R2Q15599 337 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 C10orf91Q5T1B1 145 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 CST9Q5W186 159 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 LCN8Q6JVE9 175 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 LRP11Q86VZ4 500 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 NIT1Q86X76 327 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 NATD1Q8N6N6 113 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 DNAAF3Q8N9W5 541 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 BPIFB6Q8NFQ5 453 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 OR8J2Q8NGG1 315 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 ZNF721Q8TF20 911 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 TLCD1Q96CP7 247 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms