RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 CEPT1Q9Y6K0 416 aa12.33□□□□□ -0.44
USP48-210ENST00000489108 J3QLW9 94 aa12.32□□□□□ -0.44
USP48-210ENST00000489108 AIPO00170 330 aa12.32□□□□□ -0.44
USP48-210ENST00000489108 FCN1O00602 326 aa12.32□□□□□ -0.44
USP48-210ENST00000489108 GEMIN2O14893 280 aaKnown RBP12.32□□□□□ -0.44
USP48-210ENST00000489108 CDRT1O95170 752 aa12.32□□□□□ -0.44
USP48-210ENST00000489108 BRI3O95415 125 aa12.32□□□□□ -0.44
USP48-210ENST00000489108 ZNF19P17023 458 aa12.32□□□□□ -0.44
USP48-210ENST00000489108 TPPP2P59282 170 aa12.32□□□□□ -0.44
USP48-210ENST00000489108 CX3CL1P78423 397 aa12.32□□□□□ -0.44
USP48-210ENST00000489108 TMED1Q13445 227 aa12.32□□□□□ -0.44
USP48-210ENST00000489108 STEAP3Q658P3 488 aa12.32□□□□□ -0.44
USP48-210ENST00000489108 IL34Q6ZMJ4 242 aa12.32□□□□□ -0.44
USP48-210ENST00000489108 ZNF497Q6ZNH5 498 aa12.32□□□□□ -0.44
USP48-210ENST00000489108 SPATA24Q86W54 205 aa12.32□□□□□ -0.44
USP48-210ENST00000489108 PRR18Q8N4B5 295 aa12.32□□□□□ -0.44
USP48-210ENST00000489108 TCTEX1D1Q8N7M0 179 aa12.32□□□□□ -0.44
USP48-210ENST00000489108 OR52N1Q8NH53 320 aa12.32□□□□□ -0.44
USP48-210ENST00000489108 OR1L1Q8NH94 360 aa12.32□□□□□ -0.44
USP48-210ENST00000489108 NEK7Q8TDX7 302 aa12.32□□□□□ -0.44
USP48-210ENST00000489108 MRPL20Q9BYC9 149 aaKnown RBP12.32□□□□□ -0.44
USP48-210ENST00000489108 ING4Q9UNL4 249 aa12.32□□□□□ -0.44
USP48-210ENST00000489108 DAPL1A0PJW8 107 aa12.31□□□□□ -0.44
USP48-210ENST00000489108 SLC16A6O15403 523 aa12.31□□□□□ -0.44
USP48-210ENST00000489108 SPINT2O43291 252 aa12.31□□□□□ -0.44
USP48-210ENST00000489108 NDUFA3O95167 84 aa12.31□□□□□ -0.44
USP48-210ENST00000489108 POLR2IP36954 125 aaKnown RBP12.31□□□□□ -0.44
USP48-210ENST00000489108 RBM11P57052 281 aaKnown RBP12.31□□□□□ -0.44
USP48-210ENST00000489108 TMEM267Q0VDI3 215 aaPredicted RBP12.31□□□□□ -0.44
USP48-210ENST00000489108 SYT6Q5T7P8 510 aaPredicted RBP12.31□□□□□ -0.44
USP48-210ENST00000489108 PYHIN1Q6K0P9 492 aa12.31□□□□□ -0.44
USP48-210ENST00000489108 OR51A2Q8NGJ7 313 aa12.31□□□□□ -0.44
USP48-210ENST00000489108 ABHD5Q8WTS1 349 aa12.31□□□□□ -0.44
USP48-210ENST00000489108 PELI1Q96FA3 418 aa12.31□□□□□ -0.44
USP48-210ENST00000489108 FBXL15Q9H469 300 aa12.31□□□□□ -0.44
USP48-210ENST00000489108 CNOT2Q9NZN8 540 aaKnown RBP12.31□□□□□ -0.44
USP48-210ENST00000489108 IZUMO1RA6ND01 250 aa12.3□□□□□ -0.44
USP48-210ENST00000489108 MAGEB3O15480 346 aa12.3□□□□□ -0.44
USP48-210ENST00000489108 HBZP02008 142 aa12.3□□□□□ -0.44
USP48-210ENST00000489108 FSTP19883 344 aa12.3□□□□□ -0.44
USP48-210ENST00000489108 RAB3AP20336 220 aa12.3□□□□□ -0.44
USP48-210ENST00000489108 ADARB1P78563 741 aaKnown RBP12.3□□□□□ -0.44
USP48-210ENST00000489108 KLF5Q13887 457 aaPredicted RBP12.3□□□□□ -0.44
USP48-210ENST00000489108 MORN2Q502X0 79 aa12.3□□□□□ -0.44
USP48-210ENST00000489108 ACTBL2Q562R1 376 aa12.3□□□□□ -0.44
USP48-210ENST00000489108 NHLRC3Q5JS37 347 aa12.3□□□□□ -0.44
USP48-210ENST00000489108 KDM4DQ6B0I6 523 aa12.3□□□□□ -0.44
USP48-210ENST00000489108 CD200R1LQ6Q8B3 271 aa12.3□□□□□ -0.44
USP48-210ENST00000489108 UNQ5815/PRO19632Q6UWF5 114 aa12.3□□□□□ -0.44
USP48-210ENST00000489108 PPP1R27Q86WC6 154 aa12.3□□□□□ -0.44
USP48-210ENST00000489108 ODF3L1Q8IXM7 274 aa12.3□□□□□ -0.44
USP48-210ENST00000489108 OR9G4Q8NGQ1 327 aa12.3□□□□□ -0.44
USP48-210ENST00000489108 OR4K15Q8NH41 348 aa12.3□□□□□ -0.44
USP48-210ENST00000489108 RFKQ969G6 155 aa12.3□□□□□ -0.44
USP48-210ENST00000489108 CPNE2Q96FN4 548 aaPredicted RBP12.3□□□□□ -0.44
USP48-210ENST00000489108 FAM103A1Q9BTL3 118 aaKnown RBP12.3□□□□□ -0.44
USP48-210ENST00000489108 THTPAQ9BU02 230 aa12.3□□□□□ -0.44
USP48-210ENST00000489108 PLEKHA3Q9HB20 300 aa12.3□□□□□ -0.44
USP48-210ENST00000489108 RANGRFQ9HD47 186 aaPredicted RBP12.3□□□□□ -0.44
USP48-210ENST00000489108 TRAPPC2LQ9UL33 140 aa12.3□□□□□ -0.44
USP48-210ENST00000489108 DNAH10Q8IVF4 4471 aa12.29□□□□□ -0.44
USP48-210ENST00000489108 SHISA3A0PJX4 238 aa12.29□□□□□ -0.44
USP48-210ENST00000489108 J3QRE1 110 aa12.29□□□□□ -0.44
USP48-210ENST00000489108 ZP3P21754 424 aa12.29□□□□□ -0.44
USP48-210ENST00000489108 ZNF529Q6P280 563 aa12.29□□□□□ -0.44
USP48-210ENST00000489108 STX19Q8N4C7 294 aa12.29□□□□□ -0.44
USP48-210ENST00000489108 OR8J1Q8NGP2 316 aa12.29□□□□□ -0.44
USP48-210ENST00000489108 C4orf36Q96KX1 117 aa12.29□□□□□ -0.44
USP48-210ENST00000489108 METTL9Q9H1A3 318 aa12.29□□□□□ -0.44
USP48-210ENST00000489108 RIBC2Q9H4K1 309 aa12.29□□□□□ -0.44
USP48-210ENST00000489108 OR2S2Q9NQN1 319 aa12.29□□□□□ -0.44
USP48-210ENST00000489108 DHDHQ9UQ10 334 aa12.29□□□□□ -0.44
USP48-210ENST00000489108 GAB2Q9UQC2 676 aa12.29□□□□□ -0.44
USP48-210ENST00000489108 KMT2AQ03164 3969 aa12.29□□□□□ -0.44
USP48-210ENST00000489108 TCRBV3S1A0A5B6 114 aa12.28□□□□□ -0.44
USP48-210ENST00000489108 ANKRD34BA5PLL1 514 aa12.28□□□□□ -0.44
USP48-210ENST00000489108 TRGV3P03979 118 aa12.28□□□□□ -0.44
USP48-210ENST00000489108 T-ENOLP0DO92 83 aa12.28□□□□□ -0.44
USP48-210ENST00000489108 RCC1P18754 421 aaPredicted RBP12.28□□□□□ -0.44
USP48-210ENST00000489108 CD40LGP29965 261 aa12.28□□□□□ -0.44
USP48-210ENST00000489108 OR3A3P47888 321 aa12.28□□□□□ -0.44
USP48-210ENST00000489108 SYNJ2BPP57105 145 aa12.28□□□□□ -0.44
USP48-210ENST00000489108 GNMTQ14749 295 aa12.28□□□□□ -0.44
USP48-210ENST00000489108 MPV17LQ2QL34 196 aa12.28□□□□□ -0.44
USP48-210ENST00000489108 TMEM30BQ3MIR4 351 aa12.28□□□□□ -0.44
USP48-210ENST00000489108 AKIRIN2Q53H80 203 aa12.28□□□□□ -0.44
USP48-210ENST00000489108 LCN12Q6JVE5 192 aa12.28□□□□□ -0.44
USP48-210ENST00000489108 C5orf24Q7Z6I8 188 aa12.28□□□□□ -0.44
USP48-210ENST00000489108 LFNGQ8NES3 379 aa12.28□□□□□ -0.44
USP48-210ENST00000489108 OR52L2PQ8NGH6 319 aa12.28□□□□□ -0.44
USP48-210ENST00000489108 TSEN15Q8WW01 171 aaKnown RBP12.28□□□□□ -0.44
USP48-210ENST00000489108 RDH12Q96NR8 316 aa12.28□□□□□ -0.44
USP48-210ENST00000489108 ST6GALNAC5Q9BVH7 336 aa12.28□□□□□ -0.44
USP48-210ENST00000489108 SLA2Q9H6Q3 261 aa12.28□□□□□ -0.44
USP48-210ENST00000489108 RAB9BQ9NP90 201 aa12.28□□□□□ -0.44
USP48-210ENST00000489108 RNF150Q9ULK6 438 aa12.28□□□□□ -0.44
USP48-210ENST00000489108 A0A1W2PP11 408 aa12.27□□□□□ -0.45
USP48-210ENST00000489108 G3V2T6 193 aa12.27□□□□□ -0.45
USP48-210ENST00000489108 RRHO14718 337 aa12.27□□□□□ -0.45
USP48-210ENST00000489108 CSN3P07498 182 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms