RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 DAD1P61803 113 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 MAPK14Q16539 360 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 C4orf26Q17RF5 130 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 LGALSLQ3ZCW2 172 aaPredicted RBP1.56□□□□□ -2.16
RFC4-213ENST00000489028 SPIN3Q5JUX0 258 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 CDKL4Q5MAI5 379 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 CYHR1Q6ZMK1 362 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 LYZL2Q7Z4W2 148 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 FAM19A5Q7Z5A7 132 aaPredicted RBP1.56□□□□□ -2.16
RFC4-213ENST00000489028 DNAAF3Q8N9W5 541 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 OR1P1Q8NH06 330 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 OR51H1Q8NH63 302 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 OR4A5Q8NH83 315 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 ERMNQ8TAM6 284 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 KCTD4Q8WVF5 259 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 TNFAIP8L1Q8WVP5 186 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 ZCCHC13Q8WW36 166 aaKnown RBP1.56□□□□□ -2.16
RFC4-213ENST00000489028 MAL2Q969L2 176 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 PPCDCQ96CD2 204 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 EBNA1BP2Q99848 306 aaKnown RBP1.56□□□□□ -2.16
RFC4-213ENST00000489028 POTEKPQ9BYX7 375 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 OR51B6Q9H340 312 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 KCNIP2Q9NS61 270 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 PARVAQ9NVD7 372 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 FGFR1OP2Q9NVK5 253 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 POLR3HQ9Y535 204 aaPredicted RBP1.56□□□□□ -2.16
RFC4-213ENST00000489028 CLUHO75153 1309 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 PTPRKQ15262 1439 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 RIMS2Q9UQ26 1411 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 BAZ1BQ9UIG0 1483 aaKnown RBP1.56□□□□□ -2.16
RFC4-213ENST00000489028 ZNF407Q9C0G0 2248 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 KIAA1671Q9BY89 1806 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 IGKV1OR2-108A0A075B7D4 117 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 TEX50A0A1B0GTY4 177 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 TINCRA0A1B0GVN0 87 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 A8MWP4 228 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 LRRN3E7EW58 273 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 H0Y980 276 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 COPEO14579 308 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 EEF1E1O43324 174 aaKnown RBP1.55□□□□□ -2.16
RFC4-213ENST00000489028 DENRO43583 198 aaKnown RBP1.55□□□□□ -2.16
RFC4-213ENST00000489028 IGKV1D-33P01593 117 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 IGKV1-33P01594 117 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 S100A6P06703 90 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 C8orf88P0DMB2 117 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 INAFM2P0DMQ5 153 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 PSKH1P11801 424 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 EVI2BP34910 448 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 TGFBR2P37173 567 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 PSMB3P49720 205 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 KLF3P57682 345 aaPredicted RBP1.55□□□□□ -2.16
RFC4-213ENST00000489028 TRMT12Q53H54 448 aaKnown RBP1.55□□□□□ -2.16
RFC4-213ENST00000489028 CST9Q5W186 159 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 ZNF660Q6AZW8 331 aaPredicted RBP1.55□□□□□ -2.16
RFC4-213ENST00000489028 TMEM136Q6ZRR5 245 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 DOLPP1Q86YN1 238 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 C2orf73Q8N5S3 287 aaPredicted RBP1.55□□□□□ -2.16
RFC4-213ENST00000489028 TMEM156Q8N614 296 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 PIGXQ8TBF5 258 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 ASB13Q8WXK3 278 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 APOBEC3DQ96AK3 386 aaPredicted RBP1.55□□□□□ -2.16
RFC4-213ENST00000489028 TLCD1Q96CP7 247 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 OTUB2Q96DC9 234 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 OR7D2Q96RA2 312 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 B9D2Q9BPU9 175 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 MED18Q9BUE0 208 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 TIPINQ9BVW5 301 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 MROQ9BYG7 248 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 ALX4Q9H161 411 aaPredicted RBP1.55□□□□□ -2.16
RFC4-213ENST00000489028 GTSF1LQ9H1H1 148 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 OR2D2Q9H210 308 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 ABCG5Q9H222 651 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 MS4A6AQ9H2W1 248 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 DUSP21Q9H596 190 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 ZNF492Q9P255 531 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 V9GYY5 206 aaPredicted RBP1.55□□□□□ -2.16
RFC4-213ENST00000489028 TRIP11Q15643 1979 aa1.55□□□□□ -2.16
RFC4-213ENST00000489028 TRBV24-1A0A075B6N3 115 aa1.54□□□□□ -2.16
RFC4-213ENST00000489028 A0A0B4J2C4 111 aa1.54□□□□□ -2.16
RFC4-213ENST00000489028 A6NED7 52 aa1.54□□□□□ -2.16
RFC4-213ENST00000489028 H3BMM0 161 aa1.54□□□□□ -2.16
RFC4-213ENST00000489028 M0QZ92 97 aa1.54□□□□□ -2.16
RFC4-213ENST00000489028 CRYBA1P05813 215 aa1.54□□□□□ -2.16
RFC4-213ENST00000489028 CGB3P0DN86 165 aa1.54□□□□□ -2.16
RFC4-213ENST00000489028 CGB7P0DN87 165 aa1.54□□□□□ -2.16
RFC4-213ENST00000489028 MIPP30301 263 aa1.54□□□□□ -2.16
RFC4-213ENST00000489028 GABRA3P34903 492 aa1.54□□□□□ -2.16
RFC4-213ENST00000489028 AKR1C2P52895 323 aa1.54□□□□□ -2.16
RFC4-213ENST00000489028 BLVRAP53004 296 aa1.54□□□□□ -2.16
RFC4-213ENST00000489028 MLLT11Q13015 90 aaPredicted RBP1.54□□□□□ -2.16
RFC4-213ENST00000489028 IL15RAQ13261 267 aa1.54□□□□□ -2.16
RFC4-213ENST00000489028 TAF9Q16594 264 aa1.54□□□□□ -2.16
RFC4-213ENST00000489028 PYCR3Q53H96 274 aa1.54□□□□□ -2.16
RFC4-213ENST00000489028 EBLN2Q6P2I7 272 aa1.54□□□□□ -2.16
RFC4-213ENST00000489028 TNFAIP8L2Q6P589 184 aaPredicted RBP1.54□□□□□ -2.16
RFC4-213ENST00000489028 RIBC1Q8N443 379 aaPredicted RBP1.54□□□□□ -2.16
RFC4-213ENST00000489028 ZNRF2Q8NHG8 242 aa1.54□□□□□ -2.16
RFC4-213ENST00000489028 RNF133Q8WVZ7 376 aa1.54□□□□□ -2.16
RFC4-213ENST00000489028 TMBIM1Q969X1 311 aa1.54□□□□□ -2.16
RFC4-213ENST00000489028 HIST1H2BAQ96A08 127 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms