RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 RAB7AP51149 207 aa12.73□□□□□ -0.37
CTDSP1-209ENST00000488627 ZNF816Q0VGE8 651 aaPredicted RBP12.73□□□□□ -0.37
CTDSP1-209ENST00000488627 TMEM30BQ3MIR4 351 aa12.73□□□□□ -0.37
CTDSP1-209ENST00000488627 KCTD21Q4G0X4 260 aa12.73□□□□□ -0.37
CTDSP1-209ENST00000488627 HES5Q5TA89 166 aa12.73□□□□□ -0.37
CTDSP1-209ENST00000488627 OR8H3Q8N146 312 aa12.73□□□□□ -0.37
CTDSP1-209ENST00000488627 PRR18Q8N4B5 295 aa12.73□□□□□ -0.37
CTDSP1-209ENST00000488627 KLHDC1Q8N7A1 406 aa12.73□□□□□ -0.37
CTDSP1-209ENST00000488627 OR56B4Q8NH76 319 aa12.73□□□□□ -0.37
CTDSP1-209ENST00000488627 CAPSLQ8WWF8 208 aa12.73□□□□□ -0.37
CTDSP1-209ENST00000488627 SLC25A33Q9BSK2 321 aa12.73□□□□□ -0.37
CTDSP1-209ENST00000488627 URM1Q9BTM9 101 aaKnown RBP12.73□□□□□ -0.37
CTDSP1-209ENST00000488627 WNT10AQ9GZT5 417 aa12.73□□□□□ -0.37
CTDSP1-209ENST00000488627 RAB9BQ9NP90 201 aa12.73□□□□□ -0.37
CTDSP1-209ENST00000488627 PLEKHJ1Q9NW61 149 aa12.73□□□□□ -0.37
CTDSP1-209ENST00000488627 HSF4Q9ULV5 492 aa12.73□□□□□ -0.37
CTDSP1-209ENST00000488627 TRBV6-6A0A0A6YYG2 114 aa12.72□□□□□ -0.37
CTDSP1-209ENST00000488627 PDCD5O14737 125 aa12.72□□□□□ -0.37
CTDSP1-209ENST00000488627 FAM106CPP0CH98 169 aa12.72□□□□□ -0.37
CTDSP1-209ENST00000488627 ZNF137PP52743 207 aa12.72□□□□□ -0.37
CTDSP1-209ENST00000488627 HTD2P86397 168 aa12.72□□□□□ -0.37
CTDSP1-209ENST00000488627 HERPUD1Q15011 391 aa12.72□□□□□ -0.37
CTDSP1-209ENST00000488627 HMGN3Q15651 99 aa12.72□□□□□ -0.37
CTDSP1-209ENST00000488627 MORN2Q502X0 79 aa12.72□□□□□ -0.37
CTDSP1-209ENST00000488627 PLAC9Q5JTB6 97 aa12.72□□□□□ -0.37
CTDSP1-209ENST00000488627 STEAP3Q658P3 488 aa12.72□□□□□ -0.37
CTDSP1-209ENST00000488627 OR52L2PQ8NGH6 319 aa12.72□□□□□ -0.37
CTDSP1-209ENST00000488627 OR10V1Q8NGI7 309 aa12.72□□□□□ -0.37
CTDSP1-209ENST00000488627 OR2S2Q9NQN1 319 aa12.72□□□□□ -0.37
CTDSP1-209ENST00000488627 TXNL4BQ9NX01 149 aaKnown RBP12.72□□□□□ -0.37
CTDSP1-209ENST00000488627 KCNIP1Q9NZI2 227 aa12.72□□□□□ -0.37
CTDSP1-209ENST00000488627 GNG12Q9UBI6 72 aa12.72□□□□□ -0.37
CTDSP1-209ENST00000488627 IGHV1-3A0A0C4DH29 117 aa12.71□□□□□ -0.37
CTDSP1-209ENST00000488627 HSD17B6O14756 317 aa12.71□□□□□ -0.37
CTDSP1-209ENST00000488627 GAPDHP04406 335 aaKnown RBP12.71□□□□□ -0.37
CTDSP1-209ENST00000488627 SNRNP70P08621 437 aaKnown RBP12.71□□□□□ -0.37
CTDSP1-209ENST00000488627 RAB3BP20337 219 aa12.71□□□□□ -0.37
CTDSP1-209ENST00000488627 MYL9P24844 172 aa12.71□□□□□ -0.37
CTDSP1-209ENST00000488627 REG1BP48304 166 aa12.71□□□□□ -0.37
CTDSP1-209ENST00000488627 VEGFCP49767 419 aa12.71□□□□□ -0.37
CTDSP1-209ENST00000488627 EBI3Q14213 229 aa12.71□□□□□ -0.37
CTDSP1-209ENST00000488627 GNMTQ14749 295 aa12.71□□□□□ -0.37
CTDSP1-209ENST00000488627 HIST2H2BDQ6DRA6 164 aa12.71□□□□□ -0.37
CTDSP1-209ENST00000488627 TREML4Q6UXN2 200 aa12.71□□□□□ -0.37
CTDSP1-209ENST00000488627 ARHGAP5-AS1Q96IT6 56 aa12.71□□□□□ -0.37
CTDSP1-209ENST00000488627 HDHD3Q9BSH5 251 aaPredicted RBP12.71□□□□□ -0.37
CTDSP1-209ENST00000488627 PECRQ9BY49 303 aa12.71□□□□□ -0.37
CTDSP1-209ENST00000488627 AK3Q9UIJ7 227 aa12.71□□□□□ -0.37
CTDSP1-209ENST00000488627 JPT1Q9UK76 154 aa12.71□□□□□ -0.37
CTDSP1-209ENST00000488627 RAB22AQ9UL26 194 aa12.71□□□□□ -0.37
CTDSP1-209ENST00000488627 STUB1Q9UNE7 303 aa12.71□□□□□ -0.37
CTDSP1-209ENST00000488627 KCNK7Q9Y2U2 307 aa12.71□□□□□ -0.37
CTDSP1-209ENST00000488627 WNK1Q9H4A3 2382 aa12.71□□□□□ -0.38
CTDSP1-209ENST00000488627 A0A0B4J203 849 aa12.7□□□□□ -0.38
CTDSP1-209ENST00000488627 YPEL1O60688 119 aa12.7□□□□□ -0.38
CTDSP1-209ENST00000488627 VSIG10L2P0DP72 767 aa12.7□□□□□ -0.38
CTDSP1-209ENST00000488627 RANBP1P43487 201 aa12.7□□□□□ -0.38
CTDSP1-209ENST00000488627 TMEM95Q3KNT9 176 aa12.7□□□□□ -0.38
CTDSP1-209ENST00000488627 LY6G6FQ5SQ64 297 aa12.7□□□□□ -0.38
CTDSP1-209ENST00000488627 Q6ZTK2 550 aa12.7□□□□□ -0.38
CTDSP1-209ENST00000488627 RTN4IP1Q8WWV3 396 aaPredicted RBP12.7□□□□□ -0.38
CTDSP1-209ENST00000488627 GALMQ96C23 342 aa12.7□□□□□ -0.38
CTDSP1-209ENST00000488627 AKR1E2Q96JD6 320 aa12.7□□□□□ -0.38
CTDSP1-209ENST00000488627 YPEL2Q96QA6 119 aa12.7□□□□□ -0.38
CTDSP1-209ENST00000488627 OR51E2Q9H255 320 aa12.7□□□□□ -0.38
CTDSP1-209ENST00000488627 RIMS4Q9H426 269 aaPredicted RBP12.7□□□□□ -0.38
CTDSP1-209ENST00000488627 PKD1L1Q8TDX9 2849 aa12.7□□□□□ -0.38
CTDSP1-209ENST00000488627 IGHV3-72A0A0B4J1Y9 119 aa12.69□□□□□ -0.38
CTDSP1-209ENST00000488627 SH2D7A6NKC9 451 aaPredicted RBP12.69□□□□□ -0.38
CTDSP1-209ENST00000488627 M0QZ24 198 aa12.69□□□□□ -0.38
CTDSP1-209ENST00000488627 RAB27BO00194 218 aa12.69□□□□□ -0.38
CTDSP1-209ENST00000488627 IGKV1D-33P01593 117 aa12.69□□□□□ -0.38
CTDSP1-209ENST00000488627 IGKV1-33P01594 117 aa12.69□□□□□ -0.38
CTDSP1-209ENST00000488627 PPP1CCP36873 323 aaKnown RBP12.69□□□□□ -0.38
CTDSP1-209ENST00000488627 MOGAT2Q3SYC2 334 aa12.69□□□□□ -0.38
CTDSP1-209ENST00000488627 ABCA11PQ4W5N1 156 aa12.69□□□□□ -0.38
CTDSP1-209ENST00000488627 MOB3BQ86TA1 216 aa12.69□□□□□ -0.38
CTDSP1-209ENST00000488627 ODF3L1Q8IXM7 274 aa12.69□□□□□ -0.38
CTDSP1-209ENST00000488627 Q8N6K4 173 aa12.69□□□□□ -0.38
CTDSP1-209ENST00000488627 C11orf44Q8N8P7 122 aa12.69□□□□□ -0.38
CTDSP1-209ENST00000488627 OR56B1Q8NGI3 324 aa12.69□□□□□ -0.38
CTDSP1-209ENST00000488627 SMIM30A4D0T7 59 aa12.68□□□□□ -0.38
CTDSP1-209ENST00000488627 ZNF736B4DX44 427 aaPredicted RBP12.68□□□□□ -0.38
CTDSP1-209ENST00000488627 M0QZK8 103 aa12.68□□□□□ -0.38
CTDSP1-209ENST00000488627 SLC2A2P11168 524 aaPredicted RBP12.68□□□□□ -0.38
CTDSP1-209ENST00000488627 RAB6AP20340 208 aa12.68□□□□□ -0.38
CTDSP1-209ENST00000488627 IL3RAP26951 378 aa12.68□□□□□ -0.38
CTDSP1-209ENST00000488627 HNF4GQ14541 408 aa12.68□□□□□ -0.38
CTDSP1-209ENST00000488627 NEDD8Q15843 81 aa12.68□□□□□ -0.38
CTDSP1-209ENST00000488627 TPRA1Q86W33 373 aa12.68□□□□□ -0.38
CTDSP1-209ENST00000488627 IZUMO1Q8IYV9 350 aa12.68□□□□□ -0.38
CTDSP1-209ENST00000488627 EAF1Q96JC9 268 aaPredicted RBP12.68□□□□□ -0.38
CTDSP1-209ENST00000488627 CHMP1AQ9HD42 196 aaPredicted RBP12.68□□□□□ -0.38
CTDSP1-209ENST00000488627 Q9N2K0 584 aa12.68□□□□□ -0.38
CTDSP1-209ENST00000488627 SSR3Q9UNL2 185 aa12.68□□□□□ -0.38
CTDSP1-209ENST00000488627 NOTOA8MTQ0 251 aa12.67□□□□□ -0.38
CTDSP1-209ENST00000488627 LANCL1O43813 399 aa12.67□□□□□ -0.38
CTDSP1-209ENST00000488627 TSPAN15O95858 294 aa12.67□□□□□ -0.38
CTDSP1-209ENST00000488627 LPLP06858 475 aa12.67□□□□□ -0.38
CTDSP1-209ENST00000488627 CD28P10747 220 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms