RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 ZNF581Q9P0T4 197 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 OPN4Q9UHM6 478 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 HIVEP2P31629 2446 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 IGKV1D-8A0A087WSZ0 117 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 TRBV6-6A0A0A6YYG2 114 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 TRAV24A0A0B4J272 114 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 PIGBOS1A0A0B4J2F0 54 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 KRTAP4-8A0A0G2JLE6 195 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 C5orf51A6NDU8 294 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 HMSDA8MTL9 139 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 FAM25EA8MYX2 175 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 VWC2LB2RUY7 222 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 L7N2F9 121 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 SIRPB1O00241 398 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 SPRY3O43610 288 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 TSC22D2O75157 780 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 SIX6O95475 246 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 OR2H2O95918 312 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 HAND1O96004 215 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 IFNA2P01563 188 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 IFNA21P01568 189 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 IGHV4-31P0DP07 118 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 CD200P41217 278 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 KCNJ3P48549 501 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 PDLIM4P50479 330 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 ZNF81P51508 661 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 UCP3P55916 312 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 FXYD4P59646 89 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 ERVK11-1P61568 191 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 SRSF2Q01130 221 aaKnown RBP5.79□□□□□ -1.48
BRCA1-216ENST00000484087 BAMBIQ13145 260 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 WDR86Q86TI4 376 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 PRIMA1Q86XR5 153 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 FAM185AQ8N0U4 392 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 C9orf62Q8N4C0 152 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 OR4A4PQ8NGN8 299 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 OR10Z1Q8NGY1 313 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 PPP1R35Q8TAP8 253 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 TOMM40LQ969M1 308 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 MOB3AQ96BX8 217 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 ELMOD3Q96FG2 381 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 RTBDNQ9BSG5 229 aaPredicted RBP5.79□□□□□ -1.48
BRCA1-216ENST00000484087 PIMREGQ9BSJ6 248 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 TLNRD1Q9H1K6 362 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 METTL8Q9H825 291 aaKnown RBP5.79□□□□□ -1.48
BRCA1-216ENST00000484087 FN3KRPQ9HA64 309 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 LPAR2Q9HBW0 351 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 RAB18Q9NP72 206 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 YAE1D1Q9NRH1 226 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 DECR2Q9NUI1 292 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 C1orf123Q9NWV4 160 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 PIPOXQ9P0Z9 390 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 IL36RNQ9UBH0 155 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 OR14J1Q9UGF5 321 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 TRAPPC2LQ9UL33 140 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 PCDHB10Q9UN67 800 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 ARHGAP32A7KAX9 2087 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 JMJD1CQ15652 2540 aa5.79□□□□□ -1.48
BRCA1-216ENST00000484087 DYSFO75923 2080 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.78□□□□□ -1.484e-12■■■■■ 43.6
BRCA1-216ENST00000484087 IGLV3-9A0A075B6K5 115 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 A0A1B0GWJ7 208 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 TMEM30CPA0ZSE6 113 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 RFPL4AA6NLU0 287 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 RFPL4AL1F8VTS6 287 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 IFNL4K9M1U5 179 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 SLC33A1O00400 549 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-216ENST00000484087 BET1O15155 118 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 PPYP01298 95 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 PI3P19957 117 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 NFYAP23511 347 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-216ENST00000484087 H2BFSP57053 126 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 PIGPP57054 158 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 RIPPLY3P57055 190 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 HLA-DRB3P79483 266 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 SRSF4Q08170 494 aaKnown RBP5.78□□□□□ -1.48
BRCA1-216ENST00000484087 SLC9A3R2Q15599 337 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 PRAMEF6Q5VXH4 476 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 ZNF660Q6AZW8 331 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-216ENST00000484087 Q6P435 159 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 WDR82Q6UXN9 313 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 ACP7Q6ZNF0 438 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 Q6ZR03 302 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 ZNF767PQ75MW2 155 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 FAM90A1Q86YD7 464 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 OR10J5Q8NHC4 309 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 THAP6Q8TBB0 222 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 MRPL30Q8TCC3 161 aaKnown RBP5.78□□□□□ -1.48
BRCA1-216ENST00000484087 TMEM230Q96A57 120 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 KIRREL1Q96J84 757 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 DIRC2Q96SL1 478 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 SUCNR1Q9BXA5 334 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 RAB1BQ9H0U4 201 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 TMEM165Q9HC07 324 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 HES4Q9HCC6 221 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 PLSCR3Q9NRY6 295 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 UFSP2Q9NUQ7 469 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 KCNIP1Q9NZI2 227 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 SLC23A1Q9UHI7 598 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 FBXO9Q9UK97 447 aaPredicted RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms