RNA–Protein interactions for RNA: ENST00000478576.5

GFM1-208, Transcript of G elongation factor mitochondrial 1, human

TSL 2 BASIC

Gene GFM1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GFM1-208	ENST00000478576	EIF3G	O75821	320 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
GFM1-208	ENST00000478576	SPINK2	P20155	84 aa		13.78	□□□□□ -0.2
GFM1-208	ENST00000478576	S100A12	P80511	92 aa		13.78	□□□□□ -0.2
GFM1-208	ENST00000478576	GABRA6	Q16445	453 aa		13.78	□□□□□ -0.2
GFM1-208	ENST00000478576	ZNF585B	Q52M93	769 aa		13.78	□□□□□ -0.2
GFM1-208	ENST00000478576	C1QL4	Q86Z23	238 aa		13.78	□□□□□ -0.2
GFM1-208	ENST00000478576	OR10G4	Q8NGN3	311 aa		13.78	□□□□□ -0.2
GFM1-208	ENST00000478576	METTL1	Q9UBP6	276 aa	Known RBP	13.78	□□□□□ -0.2
GFM1-208	ENST00000478576	CACNG5	Q9UF02	275 aa		13.78	□□□□□ -0.2
GFM1-208	ENST00000478576	PUS1	Q9Y606	427 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
GFM1-208	ENST00000478576	IGKV1-5	P01602	117 aa		13.78	□□□□□ -0.2
GFM1-208	ENST00000478576	ARG1	P05089	322 aa		13.78	□□□□□ -0.2
GFM1-208	ENST00000478576	S100A8	P05109	93 aa		13.78	□□□□□ -0.2
GFM1-208	ENST00000478576	OR8U8	P0C7N1	319 aa		13.78	□□□□□ -0.2
GFM1-208	ENST00000478576	RAC2	P15153	192 aa		13.78	□□□□□ -0.2
GFM1-208	ENST00000478576	ACSF3	Q4G176	576 aa	Predicted RBP	13.78	□□□□□ -0.2
GFM1-208	ENST00000478576	KHDC3L	Q587J8	217 aa		13.78	□□□□□ -0.2
GFM1-208	ENST00000478576	RNFT1	Q5M7Z0	435 aa		13.78	□□□□□ -0.2
GFM1-208	ENST00000478576	MYPOP	Q86VE0	399 aa	Predicted RBP	13.78	□□□□□ -0.2
GFM1-208	ENST00000478576	FAM24B	Q8N5W8	94 aa		13.78	□□□□□ -0.2
GFM1-208	ENST00000478576	PSMG3	Q9BT73	122 aa	Predicted RBP	13.78	□□□□□ -0.2
GFM1-208	ENST00000478576	TRAPPC2L	Q9UL33	140 aa		13.78	□□□□□ -0.2
GFM1-208	ENST00000478576	VPS13A	Q96RL7	3174 aa		13.77	□□□□□ -0.2
GFM1-208	ENST00000478576	IQCF6	A8MYZ5	107 aa		13.77	□□□□□ -0.21
GFM1-208	ENST00000478576		H3BQ15	152 aa		13.77	□□□□□ -0.21
GFM1-208	ENST00000478576	SIRPB1	O00241	398 aa		13.77	□□□□□ -0.21
GFM1-208	ENST00000478576	SH2D1B	O14796	132 aa		13.77	□□□□□ -0.21
GFM1-208	ENST00000478576	TNFSF15	O95150	251 aa		13.77	□□□□□ -0.21
GFM1-208	ENST00000478576	S100A6	P06703	90 aa		13.77	□□□□□ -0.21
GFM1-208	ENST00000478576	HOXB1	P14653	301 aa	Predicted RBP	13.77	□□□□□ -0.21
GFM1-208	ENST00000478576	TGIF1	Q15583	401 aa		13.77	□□□□□ -0.21
GFM1-208	ENST00000478576	IGFBP7	Q16270	282 aa		13.77	□□□□□ -0.21
GFM1-208	ENST00000478576	HAGH	Q16775	308 aa		13.77	□□□□□ -0.21
GFM1-208	ENST00000478576	ZNF766	Q5HY98	468 aa		13.77	□□□□□ -0.21
GFM1-208	ENST00000478576	DEFB123	Q8N688	67 aa		13.77	□□□□□ -0.21
GFM1-208	ENST00000478576	RNASE11	Q8TAA1	199 aa	Known RBP	13.77	□□□□□ -0.21
GFM1-208	ENST00000478576	PARD6G	Q9BYG4	376 aa	Predicted RBP	13.77	□□□□□ -0.21
GFM1-208	ENST00000478576	OR2J1	Q9GZK6	312 aa		13.77	□□□□□ -0.21
GFM1-208	ENST00000478576	hCG_1809904	A0A1W2PP81	198 aa		13.76	□□□□□ -0.21
GFM1-208	ENST00000478576		A0A1W2PR64	198 aa		13.76	□□□□□ -0.21
GFM1-208	ENST00000478576		A0A1W2PRV1	198 aa		13.76	□□□□□ -0.21
GFM1-208	ENST00000478576	TMEM210	A6NLX4	147 aa		13.76	□□□□□ -0.21
GFM1-208	ENST00000478576	OR2C1	O95371	312 aa		13.76	□□□□□ -0.21
GFM1-208	ENST00000478576	IGHV2-5	P01817	119 aa		13.76	□□□□□ -0.21
GFM1-208	ENST00000478576	SOX8	P57073	446 aa		13.76	□□□□□ -0.21
GFM1-208	ENST00000478576	THNSL2	Q86YJ6	484 aa		13.76	□□□□□ -0.21
GFM1-208	ENST00000478576	TMEM178A	Q8NBL3	297 aa		13.76	□□□□□ -0.21
GFM1-208	ENST00000478576	MUCL1	Q96DR8	90 aa		13.76	□□□□□ -0.21
GFM1-208	ENST00000478576	CDH20	Q9HBT6	801 aa		13.76	□□□□□ -0.21
GFM1-208	ENST00000478576	RNF150	Q9ULK6	438 aa		13.76	□□□□□ -0.21
GFM1-208	ENST00000478576	C1QTNF9B	B2RNN3	333 aa		13.76	□□□□□ -0.21
GFM1-208	ENST00000478576	FAM90A26	D6RGX4	464 aa		13.76	□□□□□ -0.21
GFM1-208	ENST00000478576	PPIH	O43447	177 aa	Known RBP	13.76	□□□□□ -0.21
GFM1-208	ENST00000478576	CELA3B	P08861	270 aa		13.76	□□□□□ -0.21
GFM1-208	ENST00000478576	TGFBR3	Q03167	851 aa		13.76	□□□□□ -0.21
GFM1-208	ENST00000478576	TMEM267	Q0VDI3	215 aa	Predicted RBP	13.76	□□□□□ -0.21
GFM1-208	ENST00000478576	IZUMO4	Q1ZYL8	232 aa		13.76	□□□□□ -0.21
GFM1-208	ENST00000478576	HEPN1	Q6WQI6	88 aa		13.76	□□□□□ -0.21
GFM1-208	ENST00000478576	ZNF525	Q8N782	197 aa		13.76	□□□□□ -0.21
GFM1-208	ENST00000478576	HES4	Q9HCC6	221 aa		13.76	□□□□□ -0.21
GFM1-208	ENST00000478576	PSENEN	Q9NZ42	101 aa		13.76	□□□□□ -0.21
GFM1-208	ENST00000478576	PPP1R3C	Q9UQK1	317 aa		13.76	□□□□□ -0.21
GFM1-208	ENST00000478576	TRAV39	A0A0B4J263	110 aa		13.75	□□□□□ -0.21
GFM1-208	ENST00000478576	LOC102723971	A0A1B0GUV8	181 aa		13.75	□□□□□ -0.21
GFM1-208	ENST00000478576		A0A1W2PPE3	182 aa		13.75	□□□□□ -0.21
GFM1-208	ENST00000478576	RNF212B	A8MTL3	300 aa		13.75	□□□□□ -0.21
GFM1-208	ENST00000478576		H3BP45	60 aa		13.75	□□□□□ -0.21
GFM1-208	ENST00000478576	SMIM6	P0DI80	62 aa		13.75	□□□□□ -0.21
GFM1-208	ENST00000478576	SELE	P16581	610 aa		13.75	□□□□□ -0.21
GFM1-208	ENST00000478576	IGHV1-2	P23083	117 aa		13.75	□□□□□ -0.21
GFM1-208	ENST00000478576	CTAG1A	P78358	180 aa		13.75	□□□□□ -0.21
GFM1-208	ENST00000478576	DRAM1	Q8N682	238 aa		13.75	□□□□□ -0.21
GFM1-208	ENST00000478576	ZBTB34	Q8NCN2	500 aa		13.75	□□□□□ -0.21
GFM1-208	ENST00000478576	MBD3L1	Q8WWY6	194 aa		13.75	□□□□□ -0.21
GFM1-208	ENST00000478576	RAB39B	Q96DA2	213 aa		13.75	□□□□□ -0.21
GFM1-208	ENST00000478576	TMEM9B	Q9NQ34	198 aa		13.75	□□□□□ -0.21
GFM1-208	ENST00000478576	FRYL	O94915	3013 aa		13.75	□□□□□ -0.21
GFM1-208	ENST00000478576	NXPH2	O95156	264 aa		13.75	□□□□□ -0.21
GFM1-208	ENST00000478576	UBE2N	P61088	152 aa	Known RBP	13.75	□□□□□ -0.21
GFM1-208	ENST00000478576	HES3	Q5TGS1	186 aa		13.75	□□□□□ -0.21
GFM1-208	ENST00000478576	INO80C	Q6PI98	192 aa	Predicted RBP	13.75	□□□□□ -0.21
GFM1-208	ENST00000478576	DHRS13	Q6UX07	377 aa		13.75	□□□□□ -0.21
GFM1-208	ENST00000478576	P4HA3	Q7Z4N8	544 aa		13.75	□□□□□ -0.21
GFM1-208	ENST00000478576	HAPLN4	Q86UW8	402 aa		13.75	□□□□□ -0.21
GFM1-208	ENST00000478576	ZNF429	Q86V71	674 aa		13.75	□□□□□ -0.21
GFM1-208	ENST00000478576	CYB561D1	Q8N8Q1	229 aa		13.75	□□□□□ -0.21
GFM1-208	ENST00000478576	SLC25A40	Q8TBP6	338 aa		13.75	□□□□□ -0.21
GFM1-208	ENST00000478576	SCGB1C1	Q8TD33	95 aa		13.75	□□□□□ -0.21
GFM1-208	ENST00000478576	SEBOX	Q9HB31	216 aa	Predicted RBP	13.75	□□□□□ -0.21
GFM1-208	ENST00000478576	CLCF1	Q9UBD9	225 aa		13.75	□□□□□ -0.21
GFM1-208	ENST00000478576	CDIPT	O14735	213 aa		13.74	□□□□□ -0.21
GFM1-208	ENST00000478576	CEACAM6	P40199	344 aa		13.74	□□□□□ -0.21
GFM1-208	ENST00000478576	HBG1	P69891	147 aa		13.74	□□□□□ -0.21
GFM1-208	ENST00000478576	HBG2	P69892	147 aa		13.74	□□□□□ -0.21
GFM1-208	ENST00000478576	ARG2	P78540	354 aa		13.74	□□□□□ -0.21
GFM1-208	ENST00000478576	SERF2	P84101	59 aa		13.74	□□□□□ -0.21
GFM1-208	ENST00000478576	ARL16	Q0P5N6	197 aa		13.74	□□□□□ -0.21
GFM1-208	ENST00000478576	LRRC75B	Q2VPJ9	315 aa		13.74	□□□□□ -0.21
GFM1-208	ENST00000478576	SLC35E3	Q7Z769	313 aa		13.74	□□□□□ -0.21
GFM1-208	ENST00000478576	TOLLIP	Q9H0E2	274 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms