RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 WIPI2Q9Y4P8 454 aa13.92□□□□□ -0.18
TMEM53-208ENST00000476724 NXPH2O95156 264 aa13.91□□□□□ -0.18
TMEM53-208ENST00000476724 CBR1P16152 277 aa13.91□□□□□ -0.18
TMEM53-208ENST00000476724 ATP6V0CP27449 155 aa13.91□□□□□ -0.18
TMEM53-208ENST00000476724 CD200P41217 278 aa13.91□□□□□ -0.18
TMEM53-208ENST00000476724 PPT1P50897 306 aa13.91□□□□□ -0.18
TMEM53-208ENST00000476724 MYPOPQ86VE0 399 aaPredicted RBP13.91□□□□□ -0.18
TMEM53-208ENST00000476724 C1orf162Q8NEQ5 155 aaPredicted RBP13.91□□□□□ -0.18
TMEM53-208ENST00000476724 OR5C1Q8NGR4 320 aa13.91□□□□□ -0.18
TMEM53-208ENST00000476724 OR10Z1Q8NGY1 313 aa13.91□□□□□ -0.18
TMEM53-208ENST00000476724 IL1F10Q8WWZ1 152 aa13.91□□□□□ -0.18
TMEM53-208ENST00000476724 RAB40CQ96S21 281 aa13.91□□□□□ -0.18
TMEM53-208ENST00000476724 SMCO4Q9NRQ5 59 aa13.91□□□□□ -0.18
TMEM53-208ENST00000476724 RNF115Q9Y4L5 304 aa13.91□□□□□ -0.18
TMEM53-208ENST00000476724 BTBD17A6NE02 478 aa13.91□□□□□ -0.18
TMEM53-208ENST00000476724 SIRPB1O00241 398 aa13.91□□□□□ -0.18
TMEM53-208ENST00000476724 PAX6P26367 422 aa13.91□□□□□ -0.18
TMEM53-208ENST00000476724 FHITP49789 147 aa13.91□□□□□ -0.18
TMEM53-208ENST00000476724 RPL23AP62750 156 aaKnown RBP13.91□□□□□ -0.18
TMEM53-208ENST00000476724 C9orf106Q8NAJ2 232 aa13.91□□□□□ -0.18
TMEM53-208ENST00000476724 GPR146Q96CH1 333 aa13.91□□□□□ -0.18
TMEM53-208ENST00000476724 CACNA1GO43497 2377 aa13.9□□□□□ -0.18
TMEM53-208ENST00000476724 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.9□□□□□ -0.18
TMEM53-208ENST00000476724 CDIPTO14735 213 aa13.9□□□□□ -0.18
TMEM53-208ENST00000476724 LYZL6O75951 148 aa13.9□□□□□ -0.18
TMEM53-208ENST00000476724 DFFBO76075 338 aa13.9□□□□□ -0.18
TMEM53-208ENST00000476724 NFYBP25208 207 aa13.9□□□□□ -0.18
TMEM53-208ENST00000476724 HOXC12P31275 282 aa13.9□□□□□ -0.18
TMEM53-208ENST00000476724 ASCL1P50553 236 aa13.9□□□□□ -0.18
TMEM53-208ENST00000476724 DYNLT3P51808 116 aa13.9□□□□□ -0.18
TMEM53-208ENST00000476724 PSG7Q13046 419 aa13.9□□□□□ -0.18
TMEM53-208ENST00000476724 OR51H1Q8NH63 302 aa13.9□□□□□ -0.18
TMEM53-208ENST00000476724 FAM213BQ8TBF2 198 aa13.9□□□□□ -0.18
TMEM53-208ENST00000476724 OR1A1Q9P1Q5 309 aa13.9□□□□□ -0.18
TMEM53-208ENST00000476724 TP53TG5Q9Y2B4 290 aa13.9□□□□□ -0.18
TMEM53-208ENST00000476724 ATMQ13315 3056 aa13.9□□□□□ -0.18
TMEM53-208ENST00000476724 MKRN2OSH3BPM6 223 aa13.89□□□□□ -0.19
TMEM53-208ENST00000476724 K7ENP7 123 aa13.89□□□□□ -0.19
TMEM53-208ENST00000476724 C1QL1O75973 258 aa13.89□□□□□ -0.19
TMEM53-208ENST00000476724 TMEM50AO95807 157 aa13.89□□□□□ -0.19
TMEM53-208ENST00000476724 PSG2P11465 335 aa13.89□□□□□ -0.19
TMEM53-208ENST00000476724 OMGP23515 440 aa13.89□□□□□ -0.19
TMEM53-208ENST00000476724 TESK1Q15569 626 aa13.89□□□□□ -0.19
TMEM53-208ENST00000476724 ODF3L1Q8IXM7 274 aa13.89□□□□□ -0.19
TMEM53-208ENST00000476724 TMEM171Q8WVE6 324 aa13.89□□□□□ -0.19
TMEM53-208ENST00000476724 HES4Q9HCC6 221 aa13.89□□□□□ -0.19
TMEM53-208ENST00000476724 LIN7CQ9NUP9 197 aaKnown RBP13.89□□□□□ -0.19
TMEM53-208ENST00000476724 RBM7Q9Y580 266 aaKnown RBP13.89□□□□□ -0.19
TMEM53-208ENST00000476724 A0A1W2PR80 420 aa13.89□□□□□ -0.19
TMEM53-208ENST00000476724 IGKV3-15P01624 115 aa13.89□□□□□ -0.19
TMEM53-208ENST00000476724 PAX9P55771 341 aa13.89□□□□□ -0.19
TMEM53-208ENST00000476724 STX12Q86Y82 276 aa13.89□□□□□ -0.19
TMEM53-208ENST00000476724 RNASE11Q8TAA1 199 aaKnown RBP13.89□□□□□ -0.19
TMEM53-208ENST00000476724 KLF14Q8TD94 323 aaPredicted RBP13.89□□□□□ -0.19
TMEM53-208ENST00000476724 ATP5SQ99766 215 aa13.89□□□□□ -0.19
TMEM53-208ENST00000476724 SLC35B3Q9H1N7 401 aa13.89□□□□□ -0.19
TMEM53-208ENST00000476724 DKK4Q9UBT3 224 aa13.89□□□□□ -0.19
TMEM53-208ENST00000476724 WSB1Q9Y6I7 421 aa13.89□□□□□ -0.19
TMEM53-208ENST00000476724 SPTBN4Q9H254 2564 aa13.89□□□□□ -0.19
TMEM53-208ENST00000476724 RNF212BA8MTL3 300 aa13.88□□□□□ -0.19
TMEM53-208ENST00000476724 IGLV2-14P01704 120 aa13.88□□□□□ -0.19
TMEM53-208ENST00000476724 COX5AP20674 150 aa13.88□□□□□ -0.19
TMEM53-208ENST00000476724 ERVS71-1P61550 626 aa13.88□□□□□ -0.19
TMEM53-208ENST00000476724 FOXF2Q12947 444 aa13.88□□□□□ -0.19
TMEM53-208ENST00000476724 TBR1Q16650 682 aa13.88□□□□□ -0.19
TMEM53-208ENST00000476724 ACSF3Q4G176 576 aaPredicted RBP13.88□□□□□ -0.19
TMEM53-208ENST00000476724 DPPA3Q6W0C5 159 aa13.88□□□□□ -0.19
TMEM53-208ENST00000476724 C15orf54Q8N8G6 183 aa13.88□□□□□ -0.19
TMEM53-208ENST00000476724 HIPK2Q9H2X6 1198 aa13.88□□□□□ -0.19
TMEM53-208ENST00000476724 KCNIP1Q9NZI2 227 aa13.88□□□□□ -0.19
TMEM53-208ENST00000476724 KIAA1324LA8MWY0 1029 aaPredicted RBP13.87□□□□□ -0.19
TMEM53-208ENST00000476724 NDUFA2O43678 99 aa13.87□□□□□ -0.19
TMEM53-208ENST00000476724 CST7O76096 145 aa13.87□□□□□ -0.19
TMEM53-208ENST00000476724 HAND1O96004 215 aa13.87□□□□□ -0.19
TMEM53-208ENST00000476724 SULT1A1P50225 295 aa13.87□□□□□ -0.19
TMEM53-208ENST00000476724 AVPI1Q5T686 147 aa13.87□□□□□ -0.19
TMEM53-208ENST00000476724 VWA1Q6PCB0 445 aa13.87□□□□□ -0.19
TMEM53-208ENST00000476724 CNEP1R1Q8N9A8 125 aa13.87□□□□□ -0.19
TMEM53-208ENST00000476724 ZBTB34Q8NCN2 500 aa13.87□□□□□ -0.19
TMEM53-208ENST00000476724 TUBA4BQ9H853 241 aa13.87□□□□□ -0.19
TMEM53-208ENST00000476724 KCNJ16Q9NPI9 418 aa13.87□□□□□ -0.19
TMEM53-208ENST00000476724 A0A0G2JRQ6 117 aa13.87□□□□□ -0.19
TMEM53-208ENST00000476724 TXNL1O43396 289 aa13.87□□□□□ -0.19
TMEM53-208ENST00000476724 GRPP07492 148 aa13.87□□□□□ -0.19
TMEM53-208ENST00000476724 CEACAM6P40199 344 aa13.87□□□□□ -0.19
TMEM53-208ENST00000476724 KIR2DL2P43627 348 aaPredicted RBP13.87□□□□□ -0.19
TMEM53-208ENST00000476724 IGFBP7Q16270 282 aa13.87□□□□□ -0.19
TMEM53-208ENST00000476724 ALKBH6Q3KRA9 238 aa13.87□□□□□ -0.19
TMEM53-208ENST00000476724 C1orf174Q8IYL3 243 aa13.87□□□□□ -0.19
TMEM53-208ENST00000476724 OBP2BQ9NPH6 170 aa13.87□□□□□ -0.19
TMEM53-208ENST00000476724 TMEM30CPA0ZSE6 113 aa13.86□□□□□ -0.19
TMEM53-208ENST00000476724 C1QTNF9BB2RNN3 333 aa13.86□□□□□ -0.19
TMEM53-208ENST00000476724 C3orf80F5H4A9 247 aa13.86□□□□□ -0.19
TMEM53-208ENST00000476724 EPHA1P21709 976 aa13.86□□□□□ -0.19
TMEM53-208ENST00000476724 SEM1Q6ZVN7 128 aa13.86□□□□□ -0.19
TMEM53-208ENST00000476724 PRR18Q8N4B5 295 aa13.86□□□□□ -0.19
TMEM53-208ENST00000476724 TMEM217Q8N7C4 229 aa13.86□□□□□ -0.19
TMEM53-208ENST00000476724 CXXC4Q9H2H0 198 aa13.86□□□□□ -0.19
TMEM53-208ENST00000476724 ZNF71Q9NQZ8 489 aaPredicted RBP13.86□□□□□ -0.19
TMEM53-208ENST00000476724 PPP1R3CQ9UQK1 317 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms