RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 SLC19A3Q9BZV2 496 aa1.43□□□□□ -2.18
SMC4-205ENST00000465563 ASCL3Q9NQ33 180 aa1.43□□□□□ -2.18
SMC4-205ENST00000465563 MRPL16Q9NX20 251 aaKnown RBP1.43□□□□□ -2.18
SMC4-205ENST00000465563 COMMD9Q9P000 198 aa1.43□□□□□ -2.18
SMC4-205ENST00000465563 FBXL3Q9UKT7 428 aa1.43□□□□□ -2.18
SMC4-205ENST00000465563 HSPE1-MOB4S4R3N1 261 aa1.43□□□□□ -2.18
SMC4-205ENST00000465563 NAV1Q8NEY1 1877 aa1.43□□□□□ -2.18
SMC4-205ENST00000465563 NYNRINQ9P2P1 1898 aaKnown RBP1.43□□□□□ -2.18
SMC4-205ENST00000465563 SCN9AQ15858 1988 aa1.43□□□□□ -2.18
SMC4-205ENST00000465563 MAP3K19Q56UN5 1328 aa1.42□□□□□ -2.18
SMC4-205ENST00000465563 LOC102725191A0A1B0GVB3 256 aa1.42□□□□□ -2.18
SMC4-205ENST00000465563 C9J4A7 227 aa1.42□□□□□ -2.18
SMC4-205ENST00000465563 F5H5K5 113 aa1.42□□□□□ -2.18
SMC4-205ENST00000465563 H3BSA7 217 aa1.42□□□□□ -2.18
SMC4-205ENST00000465563 IGHV3-30-3P0DP02 117 aa1.42□□□□□ -2.18
SMC4-205ENST00000465563 DLX6P56179 175 aa1.42□□□□□ -2.18
SMC4-205ENST00000465563 DYNLL1P63167 89 aaKnown RBP1.42□□□□□ -2.18
SMC4-205ENST00000465563 GTF2BQ00403 316 aa1.42□□□□□ -2.18
SMC4-205ENST00000465563 PMS2P3Q13401 168 aa1.42□□□□□ -2.18
SMC4-205ENST00000465563 LRRC26Q2I0M4 334 aa1.42□□□□□ -2.18
SMC4-205ENST00000465563 ZNF181Q2M3W8 571 aa1.42□□□□□ -2.18
SMC4-205ENST00000465563 SPIN4Q56A73 249 aa1.42□□□□□ -2.18
SMC4-205ENST00000465563 CENPWQ5EE01 88 aa1.42□□□□□ -2.18
SMC4-205ENST00000465563 XKRXQ6PP77 449 aa1.42□□□□□ -2.18
SMC4-205ENST00000465563 SDIM1Q6ZPB5 146 aa1.42□□□□□ -2.18
SMC4-205ENST00000465563 TAMM41Q96BW9 452 aa1.42□□□□□ -2.18
SMC4-205ENST00000465563 UPK3BQ9BT76 320 aa1.42□□□□□ -2.18
SMC4-205ENST00000465563 MED10Q9BTT4 135 aa1.42□□□□□ -2.18
SMC4-205ENST00000465563 GNB1LQ9BYB4 327 aa1.42□□□□□ -2.18
SMC4-205ENST00000465563 SCML1Q9UN30 329 aa1.42□□□□□ -2.18
SMC4-205ENST00000465563 LRPPRCP42704 1394 aaKnown RBP1.42□□□□□ -2.18
SMC4-205ENST00000465563 KIAA2026Q5HYC2 2103 aa1.42□□□□□ -2.18
SMC4-205ENST00000465563 GBF1Q92538 1859 aa1.41□□□□□ -2.18
SMC4-205ENST00000465563 IGSF23A1L1A6 192 aa1.41□□□□□ -2.18
SMC4-205ENST00000465563 TMEM213A2RRL7 107 aa1.41□□□□□ -2.18
SMC4-205ENST00000465563 SMLR1H3BR10 107 aa1.41□□□□□ -2.18
SMC4-205ENST00000465563 GOLGA8RI6L899 631 aa1.41□□□□□ -2.18
SMC4-205ENST00000465563 CYTH3O43739 400 aa1.41□□□□□ -2.18
SMC4-205ENST00000465563 CRABP1P29762 137 aa1.41□□□□□ -2.18
SMC4-205ENST00000465563 PSMD7P51665 324 aa1.41□□□□□ -2.18
SMC4-205ENST00000465563 BSPH1Q075Z2 132 aa1.41□□□□□ -2.18
SMC4-205ENST00000465563 KRTAP21-3Q3LHN1 58 aa1.41□□□□□ -2.18
SMC4-205ENST00000465563 BOD1L2Q8IYS8 172 aa1.41□□□□□ -2.18
SMC4-205ENST00000465563 ZNF567Q8N184 647 aa1.41□□□□□ -2.18
SMC4-205ENST00000465563 OR5K1Q8NHB7 308 aa1.41□□□□□ -2.18
SMC4-205ENST00000465563 MFSD8Q8NHS3 518 aa1.41□□□□□ -2.18
SMC4-205ENST00000465563 CFAP53Q96M91 514 aa1.41□□□□□ -2.18
SMC4-205ENST00000465563 GTSF1LQ9H1H1 148 aa1.41□□□□□ -2.18
SMC4-205ENST00000465563 C16orf95Q9H693 158 aa1.41□□□□□ -2.18
SMC4-205ENST00000465563 SPACA1Q9HBV2 294 aa1.41□□□□□ -2.18
SMC4-205ENST00000465563 UBQLN4Q9NRR5 601 aa1.41□□□□□ -2.18
SMC4-205ENST00000465563 C1orf109Q9NX04 203 aa1.41□□□□□ -2.18
SMC4-205ENST00000465563 CCL26Q9Y258 94 aa1.41□□□□□ -2.18
SMC4-205ENST00000465563 MRPS16Q9Y3D3 137 aaKnown RBP1.41□□□□□ -2.18
SMC4-205ENST00000465563 STRCP1A6NGW2 1772 aa1.41□□□□□ -2.18
SMC4-205ENST00000465563 ADGRB3O60242 1522 aa1.4□□□□□ -2.18
SMC4-205ENST00000465563 COL4A2P08572 1712 aa1.4□□□□□ -2.18
SMC4-205ENST00000465563 NCKAP5O14513 1909 aa1.4□□□□□ -2.18
SMC4-205ENST00000465563 ODF3BA8MYP8 253 aa1.4□□□□□ -2.19
SMC4-205ENST00000465563 F8VZ95 297 aa1.4□□□□□ -2.19
SMC4-205ENST00000465563 CDK14O94921 469 aa1.4□□□□□ -2.19
SMC4-205ENST00000465563 RAB36O95755 333 aa1.4□□□□□ -2.19
SMC4-205ENST00000465563 CBR1P16152 277 aa1.4□□□□□ -2.19
SMC4-205ENST00000465563 GADD45AP24522 165 aa1.4□□□□□ -2.19
SMC4-205ENST00000465563 ACTR1BP42025 376 aa1.4□□□□□ -2.19
SMC4-205ENST00000465563 PSMB3P49720 205 aa1.4□□□□□ -2.19
SMC4-205ENST00000465563 EXOC3L4Q17RC7 722 aa1.4□□□□□ -2.19
SMC4-205ENST00000465563 FAM229BQ4G0N7 80 aa1.4□□□□□ -2.19
SMC4-205ENST00000465563 FAM45BPQ6NSW5 357 aa1.4□□□□□ -2.19
SMC4-205ENST00000465563 TMEM75Q8N9X5 138 aa1.4□□□□□ -2.19
SMC4-205ENST00000465563 OR5AK3PQ8NH89 298 aa1.4□□□□□ -2.19
SMC4-205ENST00000465563 PPWD1Q96BP3 646 aaKnown RBP1.4□□□□□ -2.19
SMC4-205ENST00000465563 TMEM216Q9P0N5 145 aa1.4□□□□□ -2.19
SMC4-205ENST00000465563 HEY1Q9Y5J3 304 aa1.4□□□□□ -2.19
SMC4-205ENST00000465563 NUMA1Q14980 2115 aa1.4□□□□□ -2.19
SMC4-205ENST00000465563 LINC00854A0A1B0GVQ3 168 aa1.39□□□□□ -2.19
SMC4-205ENST00000465563 A8MWP6 167 aa1.39□□□□□ -2.19
SMC4-205ENST00000465563 KLRC4-KLRK1H3BQV0 150 aa1.39□□□□□ -2.19
SMC4-205ENST00000465563 TOX3O15405 576 aaPredicted RBP1.39□□□□□ -2.19
SMC4-205ENST00000465563 FBP1P09467 338 aa1.39□□□□□ -2.19
SMC4-205ENST00000465563 RD3LP0DJH9 198 aa1.39□□□□□ -2.19
SMC4-205ENST00000465563 GABRA3P34903 492 aa1.39□□□□□ -2.19
SMC4-205ENST00000465563 RCVRNP35243 200 aa1.39□□□□□ -2.19
SMC4-205ENST00000465563 LINC00313P59037 77 aa1.39□□□□□ -2.19
SMC4-205ENST00000465563 FGF12P61328 243 aa1.39□□□□□ -2.19
SMC4-205ENST00000465563 TSPAN31Q12999 210 aa1.39□□□□□ -2.19
SMC4-205ENST00000465563 ZNHIT3Q15649 155 aaPredicted RBP1.39□□□□□ -2.19
SMC4-205ENST00000465563 TRMT12Q53H54 448 aaKnown RBP1.39□□□□□ -2.19
SMC4-205ENST00000465563 DOLPP1Q86YN1 238 aa1.39□□□□□ -2.19
SMC4-205ENST00000465563 ZBTB8OSQ8IWT0 167 aa1.39□□□□□ -2.19
SMC4-205ENST00000465563 BLIDQ8IZY5 108 aa1.39□□□□□ -2.19
SMC4-205ENST00000465563 OR5L1Q8NGL2 311 aa1.39□□□□□ -2.19
SMC4-205ENST00000465563 ATP6V1G3Q96LB4 118 aa1.39□□□□□ -2.19
SMC4-205ENST00000465563 AICDAQ9GZX7 198 aa1.39□□□□□ -2.19
SMC4-205ENST00000465563 TUBA4BQ9H853 241 aa1.39□□□□□ -2.19
SMC4-205ENST00000465563 PSORS1C2Q9UIG4 136 aa1.39□□□□□ -2.19
SMC4-205ENST00000465563 WASHC3Q9Y3C0 194 aa1.39□□□□□ -2.19
SMC4-205ENST00000465563 GMEB1Q9Y692 573 aa1.39□□□□□ -2.19
SMC4-205ENST00000465563 SLIT2O94813 1529 aa1.39□□□□□ -2.19
SMC4-205ENST00000465563 PRRC2BQ5JSZ5 2229 aaKnown RBP1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms