RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 BATF3Q9NR55 127 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 COMMD3Q9UBI1 195 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 ZNF222Q9UK12 451 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 GSTK1Q9Y2Q3 226 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 KCNK7Q9Y2U2 307 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 V9GYH0 126 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 HMCN1Q96RW7 5635 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 TANC2Q9HCD6 1990 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 TRAV39A0A0B4J263 110 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 TRAV24A0A0B4J272 114 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 IGHV1-69-2A0A0G2JMI3 117 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 hCG_1807616A0A1W2PRN6 198 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 MEIOCA2RUB1 952 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 TMEM178BH3BS89 294 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 M0QZ24 198 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 SIRPB1O00241 398 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 TIMM23O14925 209 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 SSX5O60225 188 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 CRTAPO75718 401 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-204ENST00000463622 GYPAP02724 150 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 MGMTP16455 207 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 PRKACAP17612 351 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 PRKACBP22694 351 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 TUBG1P23258 451 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 ATP1B3P54709 279 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 DLX1P56177 255 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 RPS27AP62979 156 aaKnown RBP2.93□□□□□ -1.94
SCFD1-204ENST00000463622 PRB3Q04118 309 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-204ENST00000463622 IL24Q13007 206 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 SLC9A3R2Q15599 337 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 ZNF79Q15937 498 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 TAF9Q16594 264 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 DGUOKQ16854 277 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 ZNF404Q494X3 552 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 GLT8D1Q68CQ7 371 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 C16orf87Q6PH81 154 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 RBMS3Q6XE24 437 aaKnown RBP2.93□□□□□ -1.94
SCFD1-204ENST00000463622 ACP7Q6ZNF0 438 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 TCF23Q7RTU1 214 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 TPRA1Q86W33 373 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 FAM216BQ8N7L0 139 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 TPRX1Q8N7U7 411 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 NKAIN3Q8N8D7 197 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 SAMD12Q8N8I0 201 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 CCDC54Q8NEL0 328 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 Q8NFD4 153 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 OR6Q1Q8NGQ2 317 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 MCFD2Q8NI22 146 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 ZNF671Q8TAW3 534 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 PLPPR1Q8TBJ4 325 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 C22orf15Q8WYQ4 148 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 CCL17Q92583 94 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 TAF15Q92804 592 aaKnown RBP eCLIP2.93□□□□□ -1.946e-10■■■□□ 17.7
SCFD1-204ENST00000463622 ITFG2Q969R8 447 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 CEP19Q96LK0 163 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 SULT4A1Q9BR01 284 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 DCTN5Q9BTE1 182 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 PKIBQ9C010 78 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 C6orf62Q9GZU0 229 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-204ENST00000463622 AUNIPQ9H7T9 357 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 NEK6Q9HC98 313 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 HMG20AQ9NP66 347 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.93□□□□□ -1.944e-7■■■■■ 32.6
SCFD1-204ENST00000463622 TUBG2Q9NRH3 451 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 TMEM106BQ9NUM4 274 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 CKLFQ9UBR5 152 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 ZNF69Q9UC07 566 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 IL19Q9UHD0 177 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 SPATA2Q9UM82 520 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 SLC7A11Q9UPY5 501 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 MAB21L2Q9Y586 359 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 A0A075B6Q4 140 aa2.92□□□□□ -1.94
SCFD1-204ENST00000463622 IGKV1D-8A0A087WSZ0 117 aa2.92□□□□□ -1.94
SCFD1-204ENST00000463622 MEIS3P1A6NDR6 274 aa2.92□□□□□ -1.94
SCFD1-204ENST00000463622 RFPL4AA6NLU0 287 aa2.92□□□□□ -1.94
SCFD1-204ENST00000463622 TMEM210A6NLX4 147 aa2.92□□□□□ -1.94
SCFD1-204ENST00000463622 RFPL4AL1F8VTS6 287 aa2.92□□□□□ -1.94
SCFD1-204ENST00000463622 J3QRK9 145 aa2.92□□□□□ -1.94
SCFD1-204ENST00000463622 PDCD5O14737 125 aa2.92□□□□□ -1.94
SCFD1-204ENST00000463622 TPD52L2O43399 206 aaKnown RBP2.92□□□□□ -1.94
SCFD1-204ENST00000463622 BUB3O43684 328 aa2.92□□□□□ -1.94
SCFD1-204ENST00000463622 LANCL1O43813 399 aa2.92□□□□□ -1.94
SCFD1-204ENST00000463622 NOL3O60936 208 aaKnown RBP2.92□□□□□ -1.94
SCFD1-204ENST00000463622 NOS1APO75052 506 aaPredicted RBP2.92□□□□□ -1.94
SCFD1-204ENST00000463622 CLPXO76031 633 aa2.92□□□□□ -1.94
SCFD1-204ENST00000463622 OR2H2O95918 312 aa2.92□□□□□ -1.94
SCFD1-204ENST00000463622 IGHV2-70P01814 119 aa2.92□□□□□ -1.94
SCFD1-204ENST00000463622 HLA-DQB1P01920 261 aa2.92□□□□□ -1.94
SCFD1-204ENST00000463622 CSTBP04080 98 aaKnown RBP2.92□□□□□ -1.94
SCFD1-204ENST00000463622 SNRNP70P08621 437 aaKnown RBP2.92□□□□□ -1.94
SCFD1-204ENST00000463622 OCMP0CE72 109 aaPredicted RBP2.92□□□□□ -1.94
SCFD1-204ENST00000463622 PSG2P11465 335 aa2.92□□□□□ -1.94
SCFD1-204ENST00000463622 GNB3P16520 340 aa2.92□□□□□ -1.94
SCFD1-204ENST00000463622 GABRR1P24046 479 aa2.92□□□□□ -1.94
SCFD1-204ENST00000463622 CDK2P24941 298 aa2.92□□□□□ -1.94
SCFD1-204ENST00000463622 VEGFCP49767 419 aa2.92□□□□□ -1.94
SCFD1-204ENST00000463622 RORCP51449 518 aa2.92□□□□□ -1.94
SCFD1-204ENST00000463622 RBM11P57052 281 aaKnown RBP2.92□□□□□ -1.94
SCFD1-204ENST00000463622 KRTAP10-3P60369 221 aa2.92□□□□□ -1.94
SCFD1-204ENST00000463622 FGF12P61328 243 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms