RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 SLC2A2P11168 524 aaPredicted RBP9.56□□□□□ -0.88
GPNMB-204ENST00000459927 IGFBP3P17936 291 aaPredicted RBP9.56□□□□□ -0.88
GPNMB-204ENST00000459927 RCC1P18754 421 aaPredicted RBP9.56□□□□□ -0.88
GPNMB-204ENST00000459927 GNB1P62873 340 aa9.56□□□□□ -0.88
GPNMB-204ENST00000459927 LIN54Q6MZP7 749 aa9.56□□□□□ -0.88
GPNMB-204ENST00000459927 OVCH2Q7RTZ1 564 aa9.56□□□□□ -0.88
GPNMB-204ENST00000459927 CBR4Q8N4T8 237 aa9.56□□□□□ -0.88
GPNMB-204ENST00000459927 MINDY2Q8NBR6 621 aa9.56□□□□□ -0.88
GPNMB-204ENST00000459927 OR10V1Q8NGI7 309 aa9.56□□□□□ -0.88
GPNMB-204ENST00000459927 DLX4Q92988 240 aaPredicted RBP9.56□□□□□ -0.88
GPNMB-204ENST00000459927 RCHY1Q96PM5 261 aa9.56□□□□□ -0.88
GPNMB-204ENST00000459927 OR5B12Q96R08 314 aa9.56□□□□□ -0.88
GPNMB-204ENST00000459927 SLC29A1Q99808 456 aa9.56□□□□□ -0.88
GPNMB-204ENST00000459927 SPACA1Q9HBV2 294 aa9.56□□□□□ -0.88
GPNMB-204ENST00000459927 RAB9BQ9NP90 201 aa9.56□□□□□ -0.88
GPNMB-204ENST00000459927 CHCHD3Q9NX63 227 aaKnown RBP9.56□□□□□ -0.88
GPNMB-204ENST00000459927 BABAM2Q9NXR7 383 aa9.56□□□□□ -0.88
GPNMB-204ENST00000459927 FAM53CQ9NYF3 392 aa9.56□□□□□ -0.88
GPNMB-204ENST00000459927 IGHV7-81A0A0B4J1V7 117 aa9.55□□□□□ -0.88
GPNMB-204ENST00000459927 LOC100130705A0A1B0GUX0 176 aa9.55□□□□□ -0.88
GPNMB-204ENST00000459927 MAGEA13PA6NCF6 341 aa9.55□□□□□ -0.88
GPNMB-204ENST00000459927 H3BNX3 289 aa9.55□□□□□ -0.88
GPNMB-204ENST00000459927 OVOL1O14753 267 aa9.55□□□□□ -0.88
GPNMB-204ENST00000459927 SPNP16150 400 aa9.55□□□□□ -0.88
GPNMB-204ENST00000459927 CNTFRP26992 372 aa9.55□□□□□ -0.88
GPNMB-204ENST00000459927 ETV1P50549 477 aa9.55□□□□□ -0.88
GPNMB-204ENST00000459927 ACTBP60709 375 aa9.55□□□□□ -0.88
GPNMB-204ENST00000459927 PPP3R1P63098 170 aa9.55□□□□□ -0.88
GPNMB-204ENST00000459927 ADARB1P78563 741 aaKnown RBP9.55□□□□□ -0.88
GPNMB-204ENST00000459927 LSAMPQ13449 338 aa9.55□□□□□ -0.88
GPNMB-204ENST00000459927 MMDQ15546 238 aa9.55□□□□□ -0.88
GPNMB-204ENST00000459927 TMEM30BQ3MIR4 351 aa9.55□□□□□ -0.88
GPNMB-204ENST00000459927 C6orf183Q5T699 404 aa9.55□□□□□ -0.88
GPNMB-204ENST00000459927 C5orf24Q7Z6I8 188 aa9.55□□□□□ -0.88
GPNMB-204ENST00000459927 ODF3L1Q8IXM7 274 aa9.55□□□□□ -0.88
GPNMB-204ENST00000459927 PRR18Q8N4B5 295 aa9.55□□□□□ -0.88
GPNMB-204ENST00000459927 MRPS24Q96EL2 167 aaKnown RBP9.55□□□□□ -0.88
GPNMB-204ENST00000459927 ZNF184Q99676 751 aaPredicted RBP9.55□□□□□ -0.88
GPNMB-204ENST00000459927 ANKRD60Q9BZ19 345 aa9.55□□□□□ -0.88
GPNMB-204ENST00000459927 TAF9BQ9HBM6 251 aa9.55□□□□□ -0.88
GPNMB-204ENST00000459927 OR2S2Q9NQN1 319 aa9.55□□□□□ -0.88
GPNMB-204ENST00000459927 TPSG1Q9NRR2 321 aa9.55□□□□□ -0.88
GPNMB-204ENST00000459927 ETAA1Q9NY74 926 aa9.55□□□□□ -0.88
GPNMB-204ENST00000459927 RCC2Q9P258 522 aaKnown RBP9.55□□□□□ -0.88
GPNMB-204ENST00000459927 PEX16Q9Y5Y5 336 aa9.55□□□□□ -0.88
GPNMB-204ENST00000459927 DNAH7Q8WXX0 4024 aa9.55□□□□□ -0.88
GPNMB-204ENST00000459927 TRAV41A0A0B4J266 112 aa9.54□□□□□ -0.88
GPNMB-204ENST00000459927 ATP6V0E1O15342 81 aa9.54□□□□□ -0.88
GPNMB-204ENST00000459927 CA11O75493 328 aa9.54□□□□□ -0.88
GPNMB-204ENST00000459927 CIB2O75838 187 aa9.54□□□□□ -0.88
GPNMB-204ENST00000459927 HLA-DRB1P01911 266 aa9.54□□□□□ -0.88
GPNMB-204ENST00000459927 GLAP06280 429 aa9.54□□□□□ -0.88
GPNMB-204ENST00000459927 LYL1P12980 280 aa9.54□□□□□ -0.88
GPNMB-204ENST00000459927 MYF6P23409 242 aa9.54□□□□□ -0.88
GPNMB-204ENST00000459927 OR2G6Q5TZ20 316 aa9.54□□□□□ -0.88
GPNMB-204ENST00000459927 RAB12Q6IQ22 244 aa9.54□□□□□ -0.88
GPNMB-204ENST00000459927 GLIPR1L1Q6UWM5 242 aa9.54□□□□□ -0.88
GPNMB-204ENST00000459927 NPBQ8NG41 125 aa9.54□□□□□ -0.88
GPNMB-204ENST00000459927 OR52L2PQ8NGH6 319 aa9.54□□□□□ -0.88
GPNMB-204ENST00000459927 APH1BQ8WW43 257 aa9.54□□□□□ -0.88
GPNMB-204ENST00000459927 GHSRQ92847 366 aa9.54□□□□□ -0.88
GPNMB-204ENST00000459927 NABP2Q9BQ15 211 aa9.54□□□□□ -0.88
GPNMB-204ENST00000459927 ZNF251Q9BRH9 671 aa9.54□□□□□ -0.88
GPNMB-204ENST00000459927 NUBP2Q9Y5Y2 271 aa9.54□□□□□ -0.88
GPNMB-204ENST00000459927 TRBV5-5A0A0J9YX44 114 aa9.53□□□□□ -0.88
GPNMB-204ENST00000459927 SC5DO75845 299 aa9.53□□□□□ -0.88
GPNMB-204ENST00000459927 FRMD6-AS1P0C7T7 363 aa9.53□□□□□ -0.88
GPNMB-204ENST00000459927 GP9P14770 177 aa9.53□□□□□ -0.88
GPNMB-204ENST00000459927 FUT3P21217 361 aa9.53□□□□□ -0.88
GPNMB-204ENST00000459927 DCKP27707 260 aa9.53□□□□□ -0.88
GPNMB-204ENST00000459927 RPS11P62280 158 aaKnown RBP eCLIP9.53□□□□□ -0.88
GPNMB-204ENST00000459927 RIPK1Q13546 671 aa9.53□□□□□ -0.88
GPNMB-204ENST00000459927 SMN1Q16637 294 aaKnown RBP9.53□□□□□ -0.88
GPNMB-204ENST00000459927 C5orf64Q2M2E5 130 aa9.53□□□□□ -0.88
GPNMB-204ENST00000459927 LY6G6FQ5SQ64 297 aa9.53□□□□□ -0.88
GPNMB-204ENST00000459927 TRAT1Q6PIZ9 186 aa9.53□□□□□ -0.88
GPNMB-204ENST00000459927 TMPRSS11AQ6ZMR5 421 aa9.53□□□□□ -0.88
GPNMB-204ENST00000459927 OR13C5Q8NGS8 318 aa9.53□□□□□ -0.88
GPNMB-204ENST00000459927 TOLLIPQ9H0E2 274 aa9.53□□□□□ -0.88
GPNMB-204ENST00000459927 ALX4Q9H161 411 aaPredicted RBP9.53□□□□□ -0.88
GPNMB-204ENST00000459927 BANF2Q9H503 90 aa9.53□□□□□ -0.88
GPNMB-204ENST00000459927 ZMAT4Q9H898 229 aa9.53□□□□□ -0.88
GPNMB-204ENST00000459927 MBNL3Q9NUK0 354 aaKnown RBP9.53□□□□□ -0.88
GPNMB-204ENST00000459927 GAR1Q9NY12 217 aaKnown RBP9.53□□□□□ -0.88
GPNMB-204ENST00000459927 KCNIP1Q9NZI2 227 aa9.53□□□□□ -0.88
GPNMB-204ENST00000459927 ERGIC3Q9Y282 383 aa9.53□□□□□ -0.88
GPNMB-204ENST00000459927 TRAV8-7A0A075B6U6 113 aa9.52□□□□□ -0.89
GPNMB-204ENST00000459927 A0A1W2PPK0 400 aa9.52□□□□□ -0.89
GPNMB-204ENST00000459927 UBE2QL1A1L167 161 aa9.52□□□□□ -0.89
GPNMB-204ENST00000459927 FAM90A7PA6NKC0 464 aa9.52□□□□□ -0.89
GPNMB-204ENST00000459927 FAM90A23PA8MXZ1 464 aa9.52□□□□□ -0.89
GPNMB-204ENST00000459927 LINC01619G3V211 115 aa9.52□□□□□ -0.89
GPNMB-204ENST00000459927 FCN1O00602 326 aa9.52□□□□□ -0.89
GPNMB-204ENST00000459927 NBR2O15453 112 aa9.52□□□□□ -0.89
GPNMB-204ENST00000459927 SOX15O60248 233 aa9.52□□□□□ -0.89
GPNMB-204ENST00000459927 YPEL1O60688 119 aa9.52□□□□□ -0.89
GPNMB-204ENST00000459927 SAP30O75446 220 aa9.52□□□□□ -0.89
GPNMB-204ENST00000459927 WBP4O75554 376 aaKnown RBP9.52□□□□□ -0.89
GPNMB-204ENST00000459927 LALBAP00709 142 aa9.52□□□□□ -0.89
GPNMB-204ENST00000459927 EGR2P11161 476 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms