RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 MRPL33O75394 65 aaKnown RBP7.76□□□□□ -1.17
COPB1-202ENST00000439561 GDF1P27539 372 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 PPP1CBP62140 327 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 RSPO1Q2MKA7 263 aaPredicted RBP7.76□□□□□ -1.17
COPB1-202ENST00000439561 WIPI1Q5MNZ9 446 aaPredicted RBP7.76□□□□□ -1.17
COPB1-202ENST00000439561 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.76□□□□□ -1.17
COPB1-202ENST00000439561 CHD9Q3L8U1 2897 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 GJE1A6NN92 205 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 A8MWP6 167 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 C2CD4DB7Z1M9 353 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 CNN1P51911 297 aaKnown RBP7.76□□□□□ -1.17
COPB1-202ENST00000439561 ARF1P84077 181 aaKnown RBP7.76□□□□□ -1.17
COPB1-202ENST00000439561 ID3Q02535 119 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 PLP2Q04941 152 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 IGFBP7Q16270 282 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 ACOT6Q3I5F7 207 aaPredicted RBP7.76□□□□□ -1.17
COPB1-202ENST00000439561 RPS19BP1Q86WX3 136 aaKnown RBP7.76□□□□□ -1.17
COPB1-202ENST00000439561 OR8G5Q8NG78 346 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 OR5R1Q8NH85 324 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 CPT1CQ8TCG5 803 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 FSCN3Q9NQT6 498 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 OR1A1Q9P1Q5 309 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 CLN8Q9UBY8 286 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 RP1L1Q8IWN7 2480 aaPredicted RBP7.76□□□□□ -1.17
COPB1-202ENST00000439561 TRAV34A0A0B4J273 112 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 ANKRD30BLA7E2S9 258 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 SYNGR1O43759 233 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 HRASP01112 189 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 CTXN2P0C2S0 81 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 EDDM3BP56851 147 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 HIST1H3AP68431 136 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 GUSBP11Q6P575 273 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 RABEPKQ7Z6M1 372 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 ABHD3Q8WU67 409 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 NINJ1Q92982 152 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 RAB24Q969Q5 203 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 PINX1Q96BK5 328 aaKnown RBP7.76□□□□□ -1.17
COPB1-202ENST00000439561 HS3ST6Q96QI5 342 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 SRXN1Q9BYN0 137 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 ACTR3CQ9C0K3 210 aaPredicted RBP7.76□□□□□ -1.17
COPB1-202ENST00000439561 TMEM38BQ9NVV0 291 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 THADAQ6YHU6 1953 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 BCAT2O15382 392 aaPredicted RBP7.75□□□□□ -1.17
COPB1-202ENST00000439561 GCGP01275 180 aa7.75□□□□□ -1.17
COPB1-202ENST00000439561 FGF5P12034 268 aa7.75□□□□□ -1.17
COPB1-202ENST00000439561 RAC2P15153 192 aa7.75□□□□□ -1.17
COPB1-202ENST00000439561 UCP1P25874 307 aa7.75□□□□□ -1.17
COPB1-202ENST00000439561 CLDN15P56746 228 aa7.75□□□□□ -1.17
COPB1-202ENST00000439561 KRTDAPP60985 99 aa7.75□□□□□ -1.17
COPB1-202ENST00000439561 TNFRSF9Q07011 255 aa7.75□□□□□ -1.17
COPB1-202ENST00000439561 KCNMB1Q16558 191 aa7.75□□□□□ -1.17
COPB1-202ENST00000439561 DBX2Q6ZNG2 339 aa7.75□□□□□ -1.17
COPB1-202ENST00000439561 NFAM1Q8NET5 270 aaPredicted RBP7.75□□□□□ -1.17
COPB1-202ENST00000439561 OR10P1Q8NGE3 313 aa7.75□□□□□ -1.17
COPB1-202ENST00000439561 FGFBP3Q8TAT2 258 aa7.75□□□□□ -1.17
COPB1-202ENST00000439561 NABP1Q96AH0 204 aa7.75□□□□□ -1.17
COPB1-202ENST00000439561 TMEM56Q96MV1 263 aa7.75□□□□□ -1.17
COPB1-202ENST00000439561 HINT2Q9BX68 163 aa7.75□□□□□ -1.17
COPB1-202ENST00000439561 OR2H1Q9GZK4 316 aa7.75□□□□□ -1.17
COPB1-202ENST00000439561 CLEC1BQ9P126 229 aa7.75□□□□□ -1.17
COPB1-202ENST00000439561 TMEM56-RWDD3S4R434 201 aa7.75□□□□□ -1.17
COPB1-202ENST00000439561 PGPEP1LA6NFU8 196 aa7.75□□□□□ -1.17
COPB1-202ENST00000439561 C11orf94C9JXX5 98 aa7.75□□□□□ -1.17
COPB1-202ENST00000439561 KITLGP21583 273 aa7.75□□□□□ -1.17
COPB1-202ENST00000439561 NUBP1P53384 320 aa7.75□□□□□ -1.17
COPB1-202ENST00000439561 NUTF2P61970 127 aaKnown RBP7.75□□□□□ -1.17
COPB1-202ENST00000439561 RPL23P62829 140 aaKnown RBP7.75□□□□□ -1.17
COPB1-202ENST00000439561 ZNF90Q03938 601 aa7.75□□□□□ -1.17
COPB1-202ENST00000439561 HERPUD1Q15011 391 aa7.75□□□□□ -1.17
COPB1-202ENST00000439561 OR8B8Q15620 311 aa7.75□□□□□ -1.17
COPB1-202ENST00000439561 FBXO46Q6PJ61 603 aaPredicted RBP7.75□□□□□ -1.17
COPB1-202ENST00000439561 BTNL3Q6UXE8 466 aa7.75□□□□□ -1.17
COPB1-202ENST00000439561 DPPA3Q6W0C5 159 aa7.75□□□□□ -1.17
COPB1-202ENST00000439561 SSX7Q7RTT5 188 aa7.75□□□□□ -1.17
COPB1-202ENST00000439561 TAF15Q92804 592 aaKnown RBP eCLIP7.75□□□□□ -1.17
COPB1-202ENST00000439561 C2orf88Q9BSF0 95 aa7.75□□□□□ -1.17
COPB1-202ENST00000439561 TAAR3PQ9P1P4 343 aa7.75□□□□□ -1.17
COPB1-202ENST00000439561 TP53TG5Q9Y2B4 290 aa7.75□□□□□ -1.17
COPB1-202ENST00000439561 OR2W1Q9Y3N9 320 aa7.75□□□□□ -1.17
COPB1-202ENST00000439561 MUC22E2RYF6 1773 aaPredicted RBP7.75□□□□□ -1.17
COPB1-202ENST00000439561 MYO15AQ9UKN7 3530 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 TRBV24-1A0A075B6N3 115 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 H0Y980 276 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 COX5AP20674 150 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 MPLP40238 635 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 THBS3P49746 956 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 DSCR4P56555 118 aaPredicted RBP7.74□□□□□ -1.17
COPB1-202ENST00000439561 ARL16Q0P5N6 197 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 OR5I1Q13606 314 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 EXT1Q16394 746 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 LBHQ53QV2 105 aaPredicted RBP7.74□□□□□ -1.17
COPB1-202ENST00000439561 OR51G1Q8NGK1 321 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 VN1R17PQ8TDU5 208 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 SSC4DQ8WTU2 575 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 NEIL1Q96FI4 390 aaPredicted RBP7.74□□□□□ -1.17
COPB1-202ENST00000439561 SIGLEC12Q96PQ1 595 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 MRPL37Q9BZE1 423 aaKnown RBP7.74□□□□□ -1.17
COPB1-202ENST00000439561 C1QTNF9BB2RNN3 333 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 KBTBD11O94819 623 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 CFIP05156 583 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms