RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 SNRNP70P08621 437 aaKnown RBP12.09□□□□□ -0.47
USB1-202ENST00000423271 FAM90A15PP0C7V4 464 aa12.09□□□□□ -0.47
USB1-202ENST00000423271 FAM90A13PP0C7W8 464 aa12.09□□□□□ -0.47
USB1-202ENST00000423271 FAM90A14PP0C7W9 464 aa12.09□□□□□ -0.47
USB1-202ENST00000423271 FAM90A24PP0C7X0 464 aa12.09□□□□□ -0.47
USB1-202ENST00000423271 ARSBP15848 533 aa12.09□□□□□ -0.47
USB1-202ENST00000423271 SDC2P34741 201 aa12.09□□□□□ -0.47
USB1-202ENST00000423271 TGFBR1P36897 503 aa12.09□□□□□ -0.47
USB1-202ENST00000423271 RPS27AP62979 156 aaKnown RBP12.09□□□□□ -0.47
USB1-202ENST00000423271 TIMM50Q3ZCQ8 353 aa12.09□□□□□ -0.47
USB1-202ENST00000423271 TCTEX1D4Q5JR98 221 aa12.09□□□□□ -0.47
USB1-202ENST00000423271 SIGIRRQ6IA17 410 aa12.09□□□□□ -0.47
USB1-202ENST00000423271 C10orf99Q6UWK7 81 aa12.09□□□□□ -0.47
USB1-202ENST00000423271 OR2W3Q7Z3T1 314 aa12.09□□□□□ -0.47
USB1-202ENST00000423271 DRAM1Q8N682 238 aa12.09□□□□□ -0.47
USB1-202ENST00000423271 OR13F1Q8NGS4 319 aa12.09□□□□□ -0.47
USB1-202ENST00000423271 NICN1Q9BSH3 213 aa12.09□□□□□ -0.47
USB1-202ENST00000423271 A0A0A6YYD4 124 aa12.08□□□□□ -0.48
USB1-202ENST00000423271 A0A0B4J203 849 aa12.08□□□□□ -0.48
USB1-202ENST00000423271 FAM90A9PA6NNJ1 464 aa12.08□□□□□ -0.48
USB1-202ENST00000423271 NOTOA8MTQ0 251 aa12.08□□□□□ -0.48
USB1-202ENST00000423271 AIPO00170 330 aa12.08□□□□□ -0.48
USB1-202ENST00000423271 SLC2A2P11168 524 aaPredicted RBP12.08□□□□□ -0.48
USB1-202ENST00000423271 LSM3P62310 102 aaKnown RBP12.08□□□□□ -0.48
USB1-202ENST00000423271 CD83Q01151 205 aa12.08□□□□□ -0.48
USB1-202ENST00000423271 MXD1Q05195 221 aa12.08□□□□□ -0.48
USB1-202ENST00000423271 PLA2G7Q13093 441 aa12.08□□□□□ -0.48
USB1-202ENST00000423271 MADCAM1Q13477 382 aa12.08□□□□□ -0.48
USB1-202ENST00000423271 C2orf76Q3KRA6 126 aa12.08□□□□□ -0.48
USB1-202ENST00000423271 C9orf152Q5JTZ5 239 aa12.08□□□□□ -0.48
USB1-202ENST00000423271 KPRPQ5T749 579 aaPredicted RBP12.08□□□□□ -0.48
USB1-202ENST00000423271 RAB12Q6IQ22 244 aa12.08□□□□□ -0.48
USB1-202ENST00000423271 FAM53AQ6NSI3 398 aaPredicted RBP12.08□□□□□ -0.48
USB1-202ENST00000423271 TPRA1Q86W33 373 aa12.08□□□□□ -0.48
USB1-202ENST00000423271 OR4F17Q8NGA8 305 aa12.08□□□□□ -0.48
USB1-202ENST00000423271 NEK7Q8TDX7 302 aa12.08□□□□□ -0.48
USB1-202ENST00000423271 CCDC107Q8WV48 283 aa12.08□□□□□ -0.48
USB1-202ENST00000423271 OR4F4Q96R69 305 aa12.08□□□□□ -0.48
USB1-202ENST00000423271 FUNDC2Q9BWH2 189 aa12.08□□□□□ -0.48
USB1-202ENST00000423271 LPAR5Q9H1C0 372 aa12.08□□□□□ -0.48
USB1-202ENST00000423271 SPACA1Q9HBV2 294 aa12.08□□□□□ -0.48
USB1-202ENST00000423271 PEX16Q9Y5Y5 336 aa12.08□□□□□ -0.48
USB1-202ENST00000423271 TMEM272A0A1B0GTI8 110 aa12.07□□□□□ -0.48
USB1-202ENST00000423271 C15orf65H3BRN8 121 aa12.07□□□□□ -0.48
USB1-202ENST00000423271 TFAP2AP05549 437 aa12.07□□□□□ -0.48
USB1-202ENST00000423271 ALDH3B2P48448 385 aa12.07□□□□□ -0.48
USB1-202ENST00000423271 OXLD1Q5BKU9 147 aa12.07□□□□□ -0.48
USB1-202ENST00000423271 NKAPLQ5M9Q1 402 aa12.07□□□□□ -0.48
USB1-202ENST00000423271 CENPVQ7Z7K6 275 aaPredicted RBP12.07□□□□□ -0.48
USB1-202ENST00000423271 OR10A7Q8NGE5 316 aa12.07□□□□□ -0.48
USB1-202ENST00000423271 OR10X1Q8NGY0 326 aa12.07□□□□□ -0.48
USB1-202ENST00000423271 ARL11Q969Q4 196 aa12.07□□□□□ -0.48
USB1-202ENST00000423271 TM2D1Q9BX74 207 aa12.07□□□□□ -0.48
USB1-202ENST00000423271 MOB4Q9Y3A3 225 aa12.07□□□□□ -0.48
USB1-202ENST00000423271 IGHV3-43A0A0B4J1X8 118 aa12.06□□□□□ -0.48
USB1-202ENST00000423271 UBE2QL1A1L167 161 aa12.06□□□□□ -0.48
USB1-202ENST00000423271 MCRIP1C9JLW8 97 aa12.06□□□□□ -0.48
USB1-202ENST00000423271 LDLRAD4O15165 306 aa12.06□□□□□ -0.48
USB1-202ENST00000423271 PDCD6O75340 191 aa12.06□□□□□ -0.48
USB1-202ENST00000423271 MT-ND4P03905 459 aa12.06□□□□□ -0.48
USB1-202ENST00000423271 FAM106CPP0CH98 169 aa12.06□□□□□ -0.48
USB1-202ENST00000423271 IGHV3-43DP0DP04 118 aa12.06□□□□□ -0.48
USB1-202ENST00000423271 FUT3P21217 361 aa12.06□□□□□ -0.48
USB1-202ENST00000423271 CHATP28329 748 aa12.06□□□□□ -0.48
USB1-202ENST00000423271 HES1Q14469 280 aa12.06□□□□□ -0.48
USB1-202ENST00000423271 SFXN4Q6P4A7 337 aa12.06□□□□□ -0.48
USB1-202ENST00000423271 ZNF497Q6ZNH5 498 aa12.06□□□□□ -0.48
USB1-202ENST00000423271 THNSL2Q86YJ6 484 aa12.06□□□□□ -0.48
USB1-202ENST00000423271 URM1Q9BTM9 101 aaKnown RBP12.06□□□□□ -0.48
USB1-202ENST00000423271 TCRBV4S1A1TA0A5B7 111 aa12.05□□□□□ -0.48
USB1-202ENST00000423271 M0QZK8 103 aa12.05□□□□□ -0.48
USB1-202ENST00000423271 SDCBPO00560 298 aaPredicted RBP12.05□□□□□ -0.48
USB1-202ENST00000423271 HSD17B6O14756 317 aa12.05□□□□□ -0.48
USB1-202ENST00000423271 SOCS1O15524 211 aa12.05□□□□□ -0.48
USB1-202ENST00000423271 IGKV1D-33P01593 117 aa12.05□□□□□ -0.48
USB1-202ENST00000423271 IGKV1-33P01594 117 aa12.05□□□□□ -0.48
USB1-202ENST00000423271 TMEM11P17152 192 aa12.05□□□□□ -0.48
USB1-202ENST00000423271 GZMHP20718 246 aa12.05□□□□□ -0.48
USB1-202ENST00000423271 RANBP1P43487 201 aa12.05□□□□□ -0.48
USB1-202ENST00000423271 REG1BP48304 166 aa12.05□□□□□ -0.48
USB1-202ENST00000423271 RAB7AP51149 207 aa12.05□□□□□ -0.48
USB1-202ENST00000423271 LOXL3P58215 753 aa12.05□□□□□ -0.48
USB1-202ENST00000423271 HNF4GQ14541 408 aa12.05□□□□□ -0.48
USB1-202ENST00000423271 SLC16A12Q6ZSM3 486 aa12.05□□□□□ -0.48
USB1-202ENST00000423271 OR8H3Q8N146 312 aa12.05□□□□□ -0.48
USB1-202ENST00000423271 FAM89BQ8N5H3 189 aa12.05□□□□□ -0.48
USB1-202ENST00000423271 NEDD4LQ96PU5 975 aa12.05□□□□□ -0.48
USB1-202ENST00000423271 NAA50Q9GZZ1 169 aaKnown RBP12.05□□□□□ -0.48
USB1-202ENST00000423271 GFOD1Q9NXC2 390 aa12.05□□□□□ -0.48
USB1-202ENST00000423271 ETAA1Q9NY74 926 aa12.05□□□□□ -0.48
USB1-202ENST00000423271 DAPK2Q9UIK4 370 aa12.05□□□□□ -0.48
USB1-202ENST00000423271 RAB22AQ9UL26 194 aa12.05□□□□□ -0.48
USB1-202ENST00000423271 DNAH9Q9NYC9 4486 aa12.04□□□□□ -0.48
USB1-202ENST00000423271 IGHV3-72A0A0B4J1Y9 119 aa12.04□□□□□ -0.48
USB1-202ENST00000423271 C12orf77C9JDV5 145 aa12.04□□□□□ -0.48
USB1-202ENST00000423271 SLC31A2O15432 143 aa12.04□□□□□ -0.48
USB1-202ENST00000423271 ORC5O43913 435 aa12.04□□□□□ -0.48
USB1-202ENST00000423271 GLAP06280 429 aa12.04□□□□□ -0.48
USB1-202ENST00000423271 SNRPBP14678 240 aaKnown RBP12.04□□□□□ -0.48
USB1-202ENST00000423271 BLVRBP30043 206 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms