RNA–Protein interactions for RNA: ENST00000410720.1

RNU6-248P-201, Transcript of RNA, U6 small nuclear 248, pseudogene, humanhuman

BASIC

Gene RNU6-248P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-248P-201ENST00000410720 RFPL4AL1F8VTS6 287 aa0.62□□□□□ -2.31
RNU6-248P-201ENST00000410720 UBFD1O14562 309 aaKnown RBP0.62□□□□□ -2.31
RNU6-248P-201ENST00000410720 CASC3O15234 703 aaKnown RBP0.62□□□□□ -2.31
RNU6-248P-201ENST00000410720 ZW10O43264 779 aa0.62□□□□□ -2.31
RNU6-248P-201ENST00000410720 GNRH2O43555 120 aa0.62□□□□□ -2.31
RNU6-248P-201ENST00000410720 SC5DO75845 299 aa0.62□□□□□ -2.31
RNU6-248P-201ENST00000410720 IGHV3-30-3P0DP02 117 aa0.62□□□□□ -2.31
RNU6-248P-201ENST00000410720 ESDP10768 282 aa0.62□□□□□ -2.31
RNU6-248P-201ENST00000410720 DNASE1L1P49184 302 aa0.62□□□□□ -2.31
RNU6-248P-201ENST00000410720 DYNLL1P63167 89 aaKnown RBP0.62□□□□□ -2.31
RNU6-248P-201ENST00000410720 STK38Q15208 465 aa0.62□□□□□ -2.31
RNU6-248P-201ENST00000410720 TRAM1Q15629 374 aa0.62□□□□□ -2.31
RNU6-248P-201ENST00000410720 OR8B12Q8NGG6 310 aa0.62□□□□□ -2.31
RNU6-248P-201ENST00000410720 LHFPL5Q8TAF8 219 aa0.62□□□□□ -2.31
RNU6-248P-201ENST00000410720 DTD1Q8TEA8 209 aa0.62□□□□□ -2.31
RNU6-248P-201ENST00000410720 PGLYRP3Q96LB9 341 aa0.62□□□□□ -2.31
RNU6-248P-201ENST00000410720 PRSS27Q9BQR3 290 aa0.62□□□□□ -2.31
RNU6-248P-201ENST00000410720 UPK3BQ9BT76 320 aa0.62□□□□□ -2.31
RNU6-248P-201ENST00000410720 XKR8Q9H6D3 395 aa0.62□□□□□ -2.31
RNU6-248P-201ENST00000410720 C11orf49Q9H6J7 331 aa0.62□□□□□ -2.31
RNU6-248P-201ENST00000410720 TAS2R13Q9NYV9 303 aa0.62□□□□□ -2.31
RNU6-248P-201ENST00000410720 TRPM6Q9BX84 2022 aa0.61□□□□□ -2.31
RNU6-248P-201ENST00000410720 IGKV3D-7A0A0C4DH55 119 aa0.61□□□□□ -2.31
RNU6-248P-201ENST00000410720 IGKV3OR2-268A0A0C4DH90 116 aa0.61□□□□□ -2.31
RNU6-248P-201ENST00000410720 BOLA2-SMG1P6H3BVE0 249 aa0.61□□□□□ -2.31
RNU6-248P-201ENST00000410720 AKR1C4P17516 323 aa0.61□□□□□ -2.31
RNU6-248P-201ENST00000410720 SULT1A2P50226 295 aa0.61□□□□□ -2.31
RNU6-248P-201ENST00000410720 ZNF90Q03938 601 aa0.61□□□□□ -2.31
RNU6-248P-201ENST00000410720 PSG3Q16557 428 aa0.61□□□□□ -2.31
RNU6-248P-201ENST00000410720 FAM183BPQ6ZVS7 135 aa0.61□□□□□ -2.31
RNU6-248P-201ENST00000410720 ASCC1Q8N9N2 400 aaKnown RBP0.61□□□□□ -2.31
RNU6-248P-201ENST00000410720 OR5D18Q8NGL1 313 aa0.61□□□□□ -2.31
RNU6-248P-201ENST00000410720 OR11L1Q8NGX0 322 aa0.61□□□□□ -2.31
RNU6-248P-201ENST00000410720 RNF133Q8WVZ7 376 aa0.61□□□□□ -2.31
RNU6-248P-201ENST00000410720 TOP1MTQ969P6 601 aa0.61□□□□□ -2.31
RNU6-248P-201ENST00000410720 ZNF471Q9BX82 626 aaPredicted RBP0.61□□□□□ -2.31
RNU6-248P-201ENST00000410720 METTL17Q9H7H0 456 aaPredicted RBP0.61□□□□□ -2.31
RNU6-248P-201ENST00000410720 RPRD1BQ9NQG5 326 aaKnown RBP0.61□□□□□ -2.31
RNU6-248P-201ENST00000410720 PSME2Q9UL46 239 aa0.61□□□□□ -2.31
RNU6-248P-201ENST00000410720 MGAT4DA6NG13 374 aa0.6□□□□□ -2.31
RNU6-248P-201ENST00000410720 C2orf74A8MZ97 194 aa0.6□□□□□ -2.31
RNU6-248P-201ENST00000410720 C8orf87E5RJ46 101 aa0.6□□□□□ -2.31
RNU6-248P-201ENST00000410720 H0YIV9 168 aa0.6□□□□□ -2.31
RNU6-248P-201ENST00000410720 KDELR3O43731 214 aa0.6□□□□□ -2.31
RNU6-248P-201ENST00000410720 CTSEP14091 401 aa0.6□□□□□ -2.31
RNU6-248P-201ENST00000410720 ATF1P18846 271 aa0.6□□□□□ -2.31
RNU6-248P-201ENST00000410720 RPA3P35244 121 aaPredicted RBP0.6□□□□□ -2.31
RNU6-248P-201ENST00000410720 ATP5J2P56134 94 aa0.6□□□□□ -2.31
RNU6-248P-201ENST00000410720 RELAQ04206 551 aa0.6□□□□□ -2.31
RNU6-248P-201ENST00000410720 C1QTNF6Q9BXI9 259 aa0.6□□□□□ -2.31
RNU6-248P-201ENST00000410720 TMBIM4Q9HC24 238 aa0.6□□□□□ -2.31
RNU6-248P-201ENST00000410720 SNX12Q9UMY4 172 aa0.6□□□□□ -2.31
RNU6-248P-201ENST00000410720 MALRD1Q5VYJ5 2156 aa0.6□□□□□ -2.31
RNU6-248P-201ENST00000410720 MDC1Q14676 2089 aaKnown RBP0.6□□□□□ -2.31
RNU6-248P-201ENST00000410720 TMSB15BA0A087X1C1 80 aa0.59□□□□□ -2.31
RNU6-248P-201ENST00000410720 TMEM235A6NFC5 223 aa0.59□□□□□ -2.31
RNU6-248P-201ENST00000410720 hCG_2039718K7EN88 272 aa0.59□□□□□ -2.31
RNU6-248P-201ENST00000410720 VAPBO95292 243 aa0.59□□□□□ -2.31
RNU6-248P-201ENST00000410720 STAG3L2P0CL84 134 aa0.59□□□□□ -2.31
RNU6-248P-201ENST00000410720 TSPEAR-AS2P59090 65 aa0.59□□□□□ -2.31
RNU6-248P-201ENST00000410720 ZNF791Q3KP31 576 aaPredicted RBP0.59□□□□□ -2.31
RNU6-248P-201ENST00000410720 HSP90B2PQ58FF3 399 aa0.59□□□□□ -2.31
RNU6-248P-201ENST00000410720 CAVIN4Q5BKX8 364 aa0.59□□□□□ -2.31
RNU6-248P-201ENST00000410720 FAM162BQ5T6X4 162 aa0.59□□□□□ -2.31
RNU6-248P-201ENST00000410720 PID1Q7Z2X4 250 aa0.59□□□□□ -2.31
RNU6-248P-201ENST00000410720 DOLPP1Q86YN1 238 aa0.59□□□□□ -2.31
RNU6-248P-201ENST00000410720 SYS1Q8N2H4 156 aa0.59□□□□□ -2.31
RNU6-248P-201ENST00000410720 CYSTM1Q9H1C7 97 aa0.59□□□□□ -2.31
RNU6-248P-201ENST00000410720 ZNF638Q14966 1978 aaKnown RBP0.59□□□□□ -2.32
RNU6-248P-201ENST00000410720 IGKV3-7A0A075B6H7 116 aa0.58□□□□□ -2.32
RNU6-248P-201ENST00000410720 TRAV41A0A0B4J266 112 aa0.58□□□□□ -2.32
RNU6-248P-201ENST00000410720 TRBV6-5A0A0K0K1A5 114 aa0.58□□□□□ -2.32
RNU6-248P-201ENST00000410720 E7EWF7 191 aa0.58□□□□□ -2.32
RNU6-248P-201ENST00000410720 SHOX2O60902 331 aaPredicted RBP0.58□□□□□ -2.32
RNU6-248P-201ENST00000410720 ORM2P19652 201 aa0.58□□□□□ -2.32
RNU6-248P-201ENST00000410720 ACTR1BP42025 376 aa0.58□□□□□ -2.32
RNU6-248P-201ENST00000410720 HENMT1Q5T8I9 393 aaKnown RBP0.58□□□□□ -2.32
RNU6-248P-201ENST00000410720 OR13C9Q8NGT0 318 aa0.58□□□□□ -2.32
RNU6-248P-201ENST00000410720 MIEN1Q9BRT3 115 aa0.58□□□□□ -2.32
RNU6-248P-201ENST00000410720 MED18Q9BUE0 208 aa0.58□□□□□ -2.32
RNU6-248P-201ENST00000410720 IFT46Q9NQC8 304 aa0.58□□□□□ -2.32
RNU6-248P-201ENST00000410720 STMN3Q9NZ72 180 aa0.58□□□□□ -2.32
RNU6-248P-201ENST00000410720 CLUHO75153 1309 aa0.58□□□□□ -2.32
RNU6-248P-201ENST00000410720 KDM5BQ9UGL1 1544 aa0.58□□□□□ -2.32
RNU6-248P-201ENST00000410720 CCDC88CQ9P219 2028 aa0.57□□□□□ -2.32
RNU6-248P-201ENST00000410720 PLCH2O75038 1416 aa0.57□□□□□ -2.32
RNU6-248P-201ENST00000410720 MDFIC2A0A1B0GVS7 189 aa0.57□□□□□ -2.32
RNU6-248P-201ENST00000410720 GRIFINA4D1Z8 144 aa0.57□□□□□ -2.32
RNU6-248P-201ENST00000410720 GOLGA8IPA6NC78 632 aa0.57□□□□□ -2.32
RNU6-248P-201ENST00000410720 ZNF705FA8MVS1 300 aaPredicted RBP0.57□□□□□ -2.32
RNU6-248P-201ENST00000410720 EPPINO95925 133 aa0.57□□□□□ -2.32
RNU6-248P-201ENST00000410720 IL9P15248 144 aa0.57□□□□□ -2.32
RNU6-248P-201ENST00000410720 BGNP21810 368 aa0.57□□□□□ -2.32
RNU6-248P-201ENST00000410720 CRHBPP24387 322 aa0.57□□□□□ -2.32
RNU6-248P-201ENST00000410720 SERPINB10P48595 397 aa0.57□□□□□ -2.32
RNU6-248P-201ENST00000410720 ACTBP60709 375 aa0.57□□□□□ -2.32
RNU6-248P-201ENST00000410720 ACTG1P63261 375 aa0.57□□□□□ -2.32
RNU6-248P-201ENST00000410720 PAFAH1B3Q15102 231 aaKnown RBP0.57□□□□□ -2.32
RNU6-248P-201ENST00000410720 SSX6Q7RTT6 188 aa0.57□□□□□ -2.32
RNU6-248P-201ENST00000410720 SLC35E3Q7Z769 313 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms