RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 YPEL4Q96NS1 127 aa13.44□□□□□ -0.26
HOXD3-202ENST00000410016 RAB40CQ96S21 281 aa13.44□□□□□ -0.26
HOXD3-202ENST00000410016 RTL8AQ9BWD3 113 aa13.44□□□□□ -0.26
HOXD3-202ENST00000410016 MBNL3Q9NUK0 354 aaKnown RBP13.44□□□□□ -0.26
HOXD3-202ENST00000410016 PUS1Q9Y606 427 aaKnown RBP eCLIP13.44□□□□□ -0.26
HOXD3-202ENST00000410016 WSB1Q9Y6I7 421 aa13.44□□□□□ -0.26
HOXD3-202ENST00000410016 PIGBOS1A0A0B4J2F0 54 aa13.43□□□□□ -0.26
HOXD3-202ENST00000410016 A0A1W2PPE3 182 aa13.43□□□□□ -0.26
HOXD3-202ENST00000410016 SIRPB1O00241 398 aa13.43□□□□□ -0.26
HOXD3-202ENST00000410016 SMPD2O60906 423 aa13.43□□□□□ -0.26
HOXD3-202ENST00000410016 EIF3GO75821 320 aaKnown RBP eCLIP13.43□□□□□ -0.26
HOXD3-202ENST00000410016 IGKV1-5P01602 117 aa13.43□□□□□ -0.26
HOXD3-202ENST00000410016 SRP19P09132 144 aaKnown RBP13.43□□□□□ -0.26
HOXD3-202ENST00000410016 MAS1LP35410 378 aa13.43□□□□□ -0.26
HOXD3-202ENST00000410016 MEOX2P50222 304 aa13.43□□□□□ -0.26
HOXD3-202ENST00000410016 ERVS71-1P61550 626 aa13.43□□□□□ -0.26
HOXD3-202ENST00000410016 ZNF146Q15072 292 aa13.43□□□□□ -0.26
HOXD3-202ENST00000410016 ALKBH6Q3KRA9 238 aa13.43□□□□□ -0.26
HOXD3-202ENST00000410016 ARL6IP6Q8N6S5 226 aa13.43□□□□□ -0.26
HOXD3-202ENST00000410016 ZDHHC11Q9H8X9 412 aa13.43□□□□□ -0.26
HOXD3-202ENST00000410016 LOC400499M0QZD8 3231 aa13.43□□□□□ -0.26
HOXD3-202ENST00000410016 hCG_1809904A0A1W2PP81 198 aa13.43□□□□□ -0.26
HOXD3-202ENST00000410016 A0A1W2PR64 198 aa13.43□□□□□ -0.26
HOXD3-202ENST00000410016 A0A1W2PRV1 198 aa13.43□□□□□ -0.26
HOXD3-202ENST00000410016 RPS23P62266 143 aaKnown RBP13.43□□□□□ -0.26
HOXD3-202ENST00000410016 ICAM4Q14773 271 aa13.43□□□□□ -0.26
HOXD3-202ENST00000410016 EIF2S3LQ2VIR3 472 aaKnown RBP13.43□□□□□ -0.26
HOXD3-202ENST00000410016 AKR1C8PQ5T2L2 129 aa13.43□□□□□ -0.26
HOXD3-202ENST00000410016 MOB1BQ7L9L4 216 aa13.43□□□□□ -0.26
HOXD3-202ENST00000410016 P4HA3Q7Z4N8 544 aa13.43□□□□□ -0.26
HOXD3-202ENST00000410016 STX12Q86Y82 276 aa13.43□□□□□ -0.26
HOXD3-202ENST00000410016 Q8IYB0 196 aa13.43□□□□□ -0.26
HOXD3-202ENST00000410016 PRR18Q8N4B5 295 aa13.43□□□□□ -0.26
HOXD3-202ENST00000410016 CACNG5Q9UF02 275 aa13.43□□□□□ -0.26
HOXD3-202ENST00000410016 PPP1R3CQ9UQK1 317 aa13.43□□□□□ -0.26
HOXD3-202ENST00000410016 CDIPTO14735 213 aa13.42□□□□□ -0.26
HOXD3-202ENST00000410016 DFFBO76075 338 aa13.42□□□□□ -0.26
HOXD3-202ENST00000410016 PGA5P0DJD9 388 aa13.42□□□□□ -0.26
HOXD3-202ENST00000410016 PPP1CBP62140 327 aa13.42□□□□□ -0.26
HOXD3-202ENST00000410016 RPL23AP62750 156 aaKnown RBP13.42□□□□□ -0.26
HOXD3-202ENST00000410016 UBALD1Q8TB05 177 aa13.42□□□□□ -0.26
HOXD3-202ENST00000410016 MALSU1Q96EH3 234 aa13.42□□□□□ -0.26
HOXD3-202ENST00000410016 TRAPPC2LQ9UL33 140 aa13.42□□□□□ -0.26
HOXD3-202ENST00000410016 WIPI2Q9Y4P8 454 aa13.42□□□□□ -0.26
HOXD3-202ENST00000410016 URB1O60287 2271 aaKnown RBP13.42□□□□□ -0.26
HOXD3-202ENST00000410016 SCAF4O95104 1147 aaKnown RBP13.42□□□□□ -0.26
HOXD3-202ENST00000410016 ACAA1P09110 424 aaPredicted RBP13.42□□□□□ -0.26
HOXD3-202ENST00000410016 TMEM267Q0VDI3 215 aaPredicted RBP13.42□□□□□ -0.26
HOXD3-202ENST00000410016 FAM209BQ5JX69 171 aa13.42□□□□□ -0.26
HOXD3-202ENST00000410016 HES3Q5TGS1 186 aa13.42□□□□□ -0.26
HOXD3-202ENST00000410016 DPPA3Q6W0C5 159 aa13.42□□□□□ -0.26
HOXD3-202ENST00000410016 THNSL2Q86YJ6 484 aa13.42□□□□□ -0.26
HOXD3-202ENST00000410016 CLDND2Q8NHS1 167 aa13.42□□□□□ -0.26
HOXD3-202ENST00000410016 LOXL4Q96JB6 756 aa13.42□□□□□ -0.26
HOXD3-202ENST00000410016 POLDIP2Q9Y2S7 368 aa13.42□□□□□ -0.26
HOXD3-202ENST00000410016 H3BQ15 152 aa13.41□□□□□ -0.26
HOXD3-202ENST00000410016 UBE2CO00762 179 aa13.41□□□□□ -0.26
HOXD3-202ENST00000410016 SYNGR2O43760 224 aa13.41□□□□□ -0.26
HOXD3-202ENST00000410016 CNOT4O95628 575 aaKnown RBP13.41□□□□□ -0.26
HOXD3-202ENST00000410016 HSPB1P04792 205 aaKnown RBP13.41□□□□□ -0.26
HOXD3-202ENST00000410016 IGHV1-2P23083 117 aa13.41□□□□□ -0.26
HOXD3-202ENST00000410016 TLE4Q04727 773 aa13.41□□□□□ -0.26
HOXD3-202ENST00000410016 ARL16Q0P5N6 197 aa13.41□□□□□ -0.26
HOXD3-202ENST00000410016 ZNF766Q5HY98 468 aa13.41□□□□□ -0.26
HOXD3-202ENST00000410016 ZNF506Q5JVG8 444 aa13.41□□□□□ -0.26
HOXD3-202ENST00000410016 TRAV1-1A0A0B4J248 108 aa13.4□□□□□ -0.26
HOXD3-202ENST00000410016 FBP1P09467 338 aa13.4□□□□□ -0.26
HOXD3-202ENST00000410016 Q3ZCU0 254 aa13.4□□□□□ -0.26
HOXD3-202ENST00000410016 RBMXL1Q96E39 390 aaKnown RBP13.4□□□□□ -0.26
HOXD3-202ENST00000410016 GMPPAQ96IJ6 420 aaPredicted RBP13.4□□□□□ -0.26
HOXD3-202ENST00000410016 UNKLQ9H9P5 680 aaKnown RBP13.4□□□□□ -0.26
HOXD3-202ENST00000410016 IGHV3-64DA0A0J9YX35 117 aa13.4□□□□□ -0.26
HOXD3-202ENST00000410016 C1QTNF9BB2RNN3 333 aa13.4□□□□□ -0.26
HOXD3-202ENST00000410016 GATCO43716 136 aaKnown RBP13.4□□□□□ -0.26
HOXD3-202ENST00000410016 RAC2P15153 192 aa13.4□□□□□ -0.26
HOXD3-202ENST00000410016 CEACAM6P40199 344 aa13.4□□□□□ -0.26
HOXD3-202ENST00000410016 IDH3GP51553 393 aaPredicted RBP13.4□□□□□ -0.26
HOXD3-202ENST00000410016 PSG7Q13046 419 aa13.4□□□□□ -0.26
HOXD3-202ENST00000410016 ADAM5Q6NVV9 412 aa13.4□□□□□ -0.26
HOXD3-202ENST00000410016 HAPLN4Q86UW8 402 aa13.4□□□□□ -0.26
HOXD3-202ENST00000410016 SLC25A40Q8TBP6 338 aa13.4□□□□□ -0.26
HOXD3-202ENST00000410016 PRRC2CQ9Y520 2896 aaKnown RBP13.4□□□□□ -0.26
HOXD3-202ENST00000410016 WDR1O75083 606 aa13.39□□□□□ -0.27
HOXD3-202ENST00000410016 NXPH2O95156 264 aa13.39□□□□□ -0.27
HOXD3-202ENST00000410016 IGHV2-5P01817 119 aa13.39□□□□□ -0.27
HOXD3-202ENST00000410016 SELEP16581 610 aa13.39□□□□□ -0.27
HOXD3-202ENST00000410016 CD200P41217 278 aa13.39□□□□□ -0.27
HOXD3-202ENST00000410016 ARG2P78540 354 aa13.39□□□□□ -0.27
HOXD3-202ENST00000410016 MRPL49Q13405 166 aaKnown RBP13.39□□□□□ -0.27
HOXD3-202ENST00000410016 TMPRSS7Q7RTY8 843 aa13.39□□□□□ -0.27
HOXD3-202ENST00000410016 DRAM1Q8N682 238 aa13.39□□□□□ -0.27
HOXD3-202ENST00000410016 CYB561D1Q8N8Q1 229 aa13.39□□□□□ -0.27
HOXD3-202ENST00000410016 RNASE11Q8TAA1 199 aaKnown RBP13.39□□□□□ -0.27
HOXD3-202ENST00000410016 RAB39BQ96DA2 213 aa13.39□□□□□ -0.27
HOXD3-202ENST00000410016 MUCL1Q96DR8 90 aa13.39□□□□□ -0.27
HOXD3-202ENST00000410016 RBM14Q96PK6 669 aaKnown RBP13.39□□□□□ -0.27
HOXD3-202ENST00000410016 IQCF6A8MYZ5 107 aa13.39□□□□□ -0.27
HOXD3-202ENST00000410016 H0YL77 283 aa13.39□□□□□ -0.27
HOXD3-202ENST00000410016 SH2D1BO14796 132 aa13.39□□□□□ -0.27
HOXD3-202ENST00000410016 PSPNO60542 156 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms