RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 ZNF702PQ9H963 129 aa11.29□□□□□ -0.6
HLA-DQB1-202ENST00000399079 CHMP1AQ9HD42 196 aaPredicted RBP11.29□□□□□ -0.6
HLA-DQB1-202ENST00000399079 OR2S2Q9NQN1 319 aa11.29□□□□□ -0.6
HLA-DQB1-202ENST00000399079 PKD1L1Q8TDX9 2849 aa11.28□□□□□ -0.6
HLA-DQB1-202ENST00000399079 OOSP1A8MZH6 123 aa11.28□□□□□ -0.6
HLA-DQB1-202ENST00000399079 SDC2P34741 201 aa11.28□□□□□ -0.6
HLA-DQB1-202ENST00000399079 MNDAP41218 407 aa11.28□□□□□ -0.6
HLA-DQB1-202ENST00000399079 MXD1Q05195 221 aa11.28□□□□□ -0.6
HLA-DQB1-202ENST00000399079 CT45A1Q5HYN5 189 aa11.28□□□□□ -0.6
HLA-DQB1-202ENST00000399079 HIST2H2BDQ6DRA6 164 aa11.28□□□□□ -0.6
HLA-DQB1-202ENST00000399079 CCDC144NLQ6NUI1 221 aa11.28□□□□□ -0.6
HLA-DQB1-202ENST00000399079 Q6ZTK2 550 aa11.28□□□□□ -0.6
HLA-DQB1-202ENST00000399079 LINC00311Q8N616 119 aa11.28□□□□□ -0.6
HLA-DQB1-202ENST00000399079 DRAM1Q8N682 238 aa11.28□□□□□ -0.6
HLA-DQB1-202ENST00000399079 OR2T6Q8NHC8 308 aa11.28□□□□□ -0.6
HLA-DQB1-202ENST00000399079 CT45A3Q8NHU0 189 aa11.28□□□□□ -0.6
HLA-DQB1-202ENST00000399079 SETD6Q8TBK2 473 aa11.28□□□□□ -0.6
HLA-DQB1-202ENST00000399079 CITED1Q99966 193 aa11.28□□□□□ -0.6
HLA-DQB1-202ENST00000399079 OCSTAMPQ9BR26 566 aa11.28□□□□□ -0.6
HLA-DQB1-202ENST00000399079 PECRQ9BY49 303 aa11.28□□□□□ -0.6
HLA-DQB1-202ENST00000399079 RANBP3Q9H6Z4 567 aaPredicted RBP11.28□□□□□ -0.6
HLA-DQB1-202ENST00000399079 RAB9BQ9NP90 201 aa11.28□□□□□ -0.6
HLA-DQB1-202ENST00000399079 RAB22AQ9UL26 194 aa11.28□□□□□ -0.6
HLA-DQB1-202ENST00000399079 HSF4Q9ULV5 492 aa11.28□□□□□ -0.6
HLA-DQB1-202ENST00000399079 HSD17B6O14756 317 aa11.27□□□□□ -0.61
HLA-DQB1-202ENST00000399079 CLEC2LP0C7M8 214 aa11.27□□□□□ -0.61
HLA-DQB1-202ENST00000399079 PPP1CCP36873 323 aaKnown RBP11.27□□□□□ -0.61
HLA-DQB1-202ENST00000399079 HMGN3Q15651 99 aa11.27□□□□□ -0.61
HLA-DQB1-202ENST00000399079 MORN2Q502X0 79 aa11.27□□□□□ -0.61
HLA-DQB1-202ENST00000399079 SLC25A48Q6ZT89 311 aaKnown RBP11.27□□□□□ -0.61
HLA-DQB1-202ENST00000399079 ZNF554Q86TJ5 538 aa11.27□□□□□ -0.61
HLA-DQB1-202ENST00000399079 C8orf31Q8N9H6 132 aa11.27□□□□□ -0.61
HLA-DQB1-202ENST00000399079 OR56B1Q8NGI3 324 aa11.27□□□□□ -0.61
HLA-DQB1-202ENST00000399079 SGMS2Q8NHU3 365 aa11.27□□□□□ -0.61
HLA-DQB1-202ENST00000399079 CAPSLQ8WWF8 208 aa11.27□□□□□ -0.61
HLA-DQB1-202ENST00000399079 IL1F10Q8WWZ1 152 aa11.27□□□□□ -0.61
HLA-DQB1-202ENST00000399079 CFHR4Q92496 578 aa11.27□□□□□ -0.61
HLA-DQB1-202ENST00000399079 GALMQ96C23 342 aa11.27□□□□□ -0.61
HLA-DQB1-202ENST00000399079 RBMXL1Q96E39 390 aaKnown RBP11.27□□□□□ -0.61
HLA-DQB1-202ENST00000399079 KCTD7Q96MP8 289 aa11.27□□□□□ -0.61
HLA-DQB1-202ENST00000399079 SLC25A33Q9BSK2 321 aa11.27□□□□□ -0.61
HLA-DQB1-202ENST00000399079 CENPOQ9BU64 300 aa11.27□□□□□ -0.61
HLA-DQB1-202ENST00000399079 KCNK7Q9Y2U2 307 aa11.27□□□□□ -0.61
HLA-DQB1-202ENST00000399079 NBEAL1Q6ZS30 2694 aa11.27□□□□□ -0.61
HLA-DQB1-202ENST00000399079 A0A087WXM4 84 aa11.26□□□□□ -0.61
HLA-DQB1-202ENST00000399079 IGHV3-72A0A0B4J1Y9 119 aa11.26□□□□□ -0.61
HLA-DQB1-202ENST00000399079 FAM90A9PA6NNJ1 464 aa11.26□□□□□ -0.61
HLA-DQB1-202ENST00000399079 NOTOA8MTQ0 251 aa11.26□□□□□ -0.61
HLA-DQB1-202ENST00000399079 SNRNP70P08621 437 aaKnown RBP11.26□□□□□ -0.61
HLA-DQB1-202ENST00000399079 RAB7AP51149 207 aa11.26□□□□□ -0.61
HLA-DQB1-202ENST00000399079 ZNF880Q6PDB4 577 aa11.26□□□□□ -0.61
HLA-DQB1-202ENST00000399079 TPRA1Q86W33 373 aa11.26□□□□□ -0.61
HLA-DQB1-202ENST00000399079 ST6GALNAC6Q969X2 333 aa11.26□□□□□ -0.61
HLA-DQB1-202ENST00000399079 SERTAD4Q9NUC0 356 aa11.26□□□□□ -0.61
HLA-DQB1-202ENST00000399079 DAPK2Q9UIK4 370 aa11.26□□□□□ -0.61
HLA-DQB1-202ENST00000399079 A0A075B6Q4 140 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 IGHV1-3A0A0C4DH29 117 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 SH2D7A6NKC9 451 aaPredicted RBP11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 RAB27BO00194 218 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 GAPDHP04406 335 aaKnown RBP11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 TGFBR1P36897 503 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 RANBP1P43487 201 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 HTD2P86397 168 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 ZNF816Q0VGE8 651 aaPredicted RBP11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 HES1Q14469 280 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 HNF4GQ14541 408 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 TMEM95Q3KNT9 176 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 TMEM30BQ3MIR4 351 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 Q3ZCU0 254 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 SFXN4Q6P4A7 337 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 MOB3BQ86TA1 216 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 OR8H3Q8N146 312 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 Q8N2B8 174 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 C11orf44Q8N8P7 122 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 OR10R2Q8NGX6 335 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 RAB3CQ96E17 227 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 RBM14Q96PK6 669 aaKnown RBP11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 CMSS1Q9BQ75 279 aaKnown RBP11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 PRSS22Q9GZN4 317 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 ZNF696Q9H7X3 374 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 C12orf4Q9NQ89 552 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 JPT1Q9UK76 154 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 TRBV6-6A0A0A6YYG2 114 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 OR2F2O95006 317 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 AMY1AP04745 511 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 AMY2AP04746 511 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 FAM106CPP0CH98 169 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 VSIG10L2P0DP72 767 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 SNRPBP14678 240 aaKnown RBP11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 GNB3P16520 340 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 RAB6AP20340 208 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 ABCA11PQ4W5N1 156 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 LYG1Q8N1E2 194 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 KLHDC1Q8N7A1 406 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 RTN4IP1Q8WWV3 396 aaPredicted RBP11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 RIMS4Q9H426 269 aaPredicted RBP11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 ABRACLQ9P1F3 81 aa11.25□□□□□ -0.61
HLA-DQB1-202ENST00000399079 VWFP04275 2813 aa11.24□□□□□ -0.61
HLA-DQB1-202ENST00000399079 MGAM2Q2M2H8 2515 aa11.24□□□□□ -0.61
HLA-DQB1-202ENST00000399079 ZNF736B4DX44 427 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms