RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 RAB2AP61019 212 aa16.61■□□□□ 0.25
RCCD1-201ENST00000394258 TBC1D28Q2M2D7 210 aa16.61■□□□□ 0.25
RCCD1-201ENST00000394258 PDZD11Q5EBL8 140 aa16.61■□□□□ 0.25
RCCD1-201ENST00000394258 NMSQ5H8A3 153 aa16.61■□□□□ 0.25
RCCD1-201ENST00000394258 OPA3Q9H6K4 179 aa16.61■□□□□ 0.25
RCCD1-201ENST00000394258 CDIPTO14735 213 aa16.6■□□□□ 0.25
RCCD1-201ENST00000394258 CHST1O43916 411 aa16.6■□□□□ 0.25
RCCD1-201ENST00000394258 CTXN2P0C2S0 81 aa16.6■□□□□ 0.25
RCCD1-201ENST00000394258 VDAC1P21796 283 aa16.6■□□□□ 0.25
RCCD1-201ENST00000394258 UCP1P25874 307 aa16.6■□□□□ 0.25
RCCD1-201ENST00000394258 RND3P61587 244 aa16.6■□□□□ 0.25
RCCD1-201ENST00000394258 ZNF154Q13106 437 aa16.6■□□□□ 0.25
RCCD1-201ENST00000394258 SRSF7Q16629 238 aaKnown RBP eCLIP16.6■□□□□ 0.25
RCCD1-201ENST00000394258 SPIN2AQ99865 258 aa16.6■□□□□ 0.25
RCCD1-201ENST00000394258 SPIN2BQ9BPZ2 258 aa16.6■□□□□ 0.25
RCCD1-201ENST00000394258 TOLLIPQ9H0E2 274 aa16.6■□□□□ 0.25
RCCD1-201ENST00000394258 OR2W1Q9Y3N9 320 aa16.6■□□□□ 0.25
RCCD1-201ENST00000394258 MMP24Q9Y5R2 645 aa16.6■□□□□ 0.25
RCCD1-201ENST00000394258 MAP1BP46821 2468 aaKnown RBP16.6■□□□□ 0.25
RCCD1-201ENST00000394258 A0A1B0GV90 55 aa16.6■□□□□ 0.25
RCCD1-201ENST00000394258 GRPP07492 148 aa16.6■□□□□ 0.25
RCCD1-201ENST00000394258 TRIP6Q15654 476 aaKnown RBP16.6■□□□□ 0.25
RCCD1-201ENST00000394258 ZNF324BQ6AW86 544 aaPredicted RBP16.6■□□□□ 0.25
RCCD1-201ENST00000394258 ZNF383Q8NA42 475 aa16.6■□□□□ 0.25
RCCD1-201ENST00000394258 SCCPDHQ8NBX0 429 aa16.6■□□□□ 0.25
RCCD1-201ENST00000394258 PLEKHF2Q9H8W4 249 aa16.6■□□□□ 0.25
RCCD1-201ENST00000394258 LYRM2Q9NU23 88 aaPredicted RBP16.6■□□□□ 0.25
RCCD1-201ENST00000394258 DMXL1Q9Y485 3027 aa16.6■□□□□ 0.25
RCCD1-201ENST00000394258 WRBO00258 174 aa16.59■□□□□ 0.25
RCCD1-201ENST00000394258 PSG2P11465 335 aa16.59■□□□□ 0.25
RCCD1-201ENST00000394258 RPS10P46783 165 aaKnown RBP16.59■□□□□ 0.25
RCCD1-201ENST00000394258 NDUFA6P56556 154 aa16.59■□□□□ 0.25
RCCD1-201ENST00000394258 SOX8P57073 446 aa16.59■□□□□ 0.25
RCCD1-201ENST00000394258 TMPRSS5Q9H3S3 457 aa16.59■□□□□ 0.25
RCCD1-201ENST00000394258 GP6Q9HCN6 339 aa16.59■□□□□ 0.25
RCCD1-201ENST00000394258 TAAR3PQ9P1P4 343 aa16.59■□□□□ 0.25
RCCD1-201ENST00000394258 PPP1R3CQ9UQK1 317 aa16.59■□□□□ 0.25
RCCD1-201ENST00000394258 STRAPQ9Y3F4 350 aaKnown RBP16.59■□□□□ 0.25
RCCD1-201ENST00000394258 RBM7Q9Y580 266 aaKnown RBP16.59■□□□□ 0.25
RCCD1-201ENST00000394258 LAMA5O15230 3695 aa16.59■□□□□ 0.25
RCCD1-201ENST00000394258 IFITM10A6NMD0 228 aa16.59■□□□□ 0.25
RCCD1-201ENST00000394258 HSPA12AO43301 675 aa16.59■□□□□ 0.25
RCCD1-201ENST00000394258 ZNF16P17020 682 aaPredicted RBP16.59■□□□□ 0.25
RCCD1-201ENST00000394258 IGHV1-2P23083 117 aa16.59■□□□□ 0.25
RCCD1-201ENST00000394258 F2RP25116 425 aa16.59■□□□□ 0.25
RCCD1-201ENST00000394258 CEBPGP53567 150 aa16.59■□□□□ 0.25
RCCD1-201ENST00000394258 UBE2NP61088 152 aaKnown RBP16.59■□□□□ 0.25
RCCD1-201ENST00000394258 PPP1CBP62140 327 aa16.59■□□□□ 0.25
RCCD1-201ENST00000394258 HLA-DRB3P79483 266 aa16.59■□□□□ 0.25
RCCD1-201ENST00000394258 CXorf67Q86X51 503 aaPredicted RBP16.59■□□□□ 0.25
RCCD1-201ENST00000394258 RIMS4Q9H426 269 aaPredicted RBP16.59■□□□□ 0.25
RCCD1-201ENST00000394258 PUS1Q9Y606 427 aaKnown RBP eCLIP16.59■□□□□ 0.25
RCCD1-201ENST00000394258 ZNF729A6NN14 1252 aaPredicted RBP16.58■□□□□ 0.25
RCCD1-201ENST00000394258 J3QT63 122 aa16.58■□□□□ 0.25
RCCD1-201ENST00000394258 OR2H2O95918 312 aa16.58■□□□□ 0.25
RCCD1-201ENST00000394258 CEBPDP49716 269 aaPredicted RBP16.58■□□□□ 0.25
RCCD1-201ENST00000394258 DEFA6Q01524 100 aa16.58■□□□□ 0.25
RCCD1-201ENST00000394258 Q6P435 159 aa16.58■□□□□ 0.25
RCCD1-201ENST00000394258 CNEP1R1Q8N9A8 125 aa16.58■□□□□ 0.25
RCCD1-201ENST00000394258 RNASE11Q8TAA1 199 aaKnown RBP16.58■□□□□ 0.25
RCCD1-201ENST00000394258 CDH20Q9HBT6 801 aa16.58■□□□□ 0.25
RCCD1-201ENST00000394258 TRAPPC2LQ9UL33 140 aa16.58■□□□□ 0.25
RCCD1-201ENST00000394258 ZNF727A8MUV8 499 aa16.58■□□□□ 0.24
RCCD1-201ENST00000394258 H0YL77 283 aa16.58■□□□□ 0.24
RCCD1-201ENST00000394258 SMPD2O60906 423 aa16.58■□□□□ 0.24
RCCD1-201ENST00000394258 SERPINE2P07093 398 aa16.58■□□□□ 0.24
RCCD1-201ENST00000394258 KIAA0141Q14154 515 aaPredicted RBP16.58■□□□□ 0.24
RCCD1-201ENST00000394258 COMMD1Q8N668 190 aa16.58■□□□□ 0.24
RCCD1-201ENST00000394258 TMEM178AQ8NBL3 297 aa16.58■□□□□ 0.24
RCCD1-201ENST00000394258 TRIB1Q96RU8 372 aa16.58■□□□□ 0.24
RCCD1-201ENST00000394258 RTL8AQ9BWD3 113 aa16.58■□□□□ 0.24
RCCD1-201ENST00000394258 SLC35B3Q9H1N7 401 aa16.58■□□□□ 0.24
RCCD1-201ENST00000394258 KCNJ16Q9NPI9 418 aa16.58■□□□□ 0.24
RCCD1-201ENST00000394258 OR14J1Q9UGF5 321 aa16.58■□□□□ 0.24
RCCD1-201ENST00000394258 PITX3O75364 302 aa16.57■□□□□ 0.24
RCCD1-201ENST00000394258 TNFSF10P50591 281 aa16.57■□□□□ 0.24
RCCD1-201ENST00000394258 RAB5CP51148 216 aa16.57■□□□□ 0.24
RCCD1-201ENST00000394258 PAX9P55771 341 aa16.57■□□□□ 0.24
RCCD1-201ENST00000394258 ID3Q02535 119 aa16.57■□□□□ 0.24
RCCD1-201ENST00000394258 SPSB3Q6PJ21 355 aa16.57■□□□□ 0.24
RCCD1-201ENST00000394258 SLC25A40Q8TBP6 338 aa16.57■□□□□ 0.24
RCCD1-201ENST00000394258 H0Y980 276 aa16.57■□□□□ 0.24
RCCD1-201ENST00000394258 ATXN7O15265 892 aaPredicted RBP16.57■□□□□ 0.24
RCCD1-201ENST00000394258 AGFG2O95081 481 aa16.57■□□□□ 0.24
RCCD1-201ENST00000394258 NXPH2O95156 264 aa16.57■□□□□ 0.24
RCCD1-201ENST00000394258 HMGN3Q15651 99 aa16.57■□□□□ 0.24
RCCD1-201ENST00000394258 HAGHQ16775 308 aa16.57■□□□□ 0.24
RCCD1-201ENST00000394258 H1FOOQ8IZA3 346 aaPredicted RBP16.57■□□□□ 0.24
RCCD1-201ENST00000394258 PKIBQ9C010 78 aa16.57■□□□□ 0.24
RCCD1-201ENST00000394258 ZDHHC11Q9H8X9 412 aa16.57■□□□□ 0.24
RCCD1-201ENST00000394258 URGCP-MRPS24S4R325 110 aa16.57■□□□□ 0.24
RCCD1-201ENST00000394258 RP1L1Q8IWN7 2480 aaPredicted RBP16.56■□□□□ 0.24
RCCD1-201ENST00000394258 CXorf65A6NEN9 183 aa16.56■□□□□ 0.24
RCCD1-201ENST00000394258 PAX6P26367 422 aa16.56■□□□□ 0.24
RCCD1-201ENST00000394258 ZNF266Q14584 549 aa16.56■□□□□ 0.24
RCCD1-201ENST00000394258 LINC00596Q86U02 117 aa16.56■□□□□ 0.24
RCCD1-201ENST00000394258 OR5D13Q8NGL4 314 aa16.56■□□□□ 0.24
RCCD1-201ENST00000394258 OR1J1Q8NGS3 322 aa16.56■□□□□ 0.24
RCCD1-201ENST00000394258 KCNS2Q9ULS6 477 aa16.56■□□□□ 0.24
RCCD1-201ENST00000394258 SELLP14151 372 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms