RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 WISP2O76076 250 aa13.78□□□□□ -0.2
TRIM27-202ENST00000377199 ELLP55199 621 aaPredicted RBP13.78□□□□□ -0.2
TRIM27-202ENST00000377199 UBE2KP61086 200 aa13.78□□□□□ -0.2
TRIM27-202ENST00000377199 RPS23P62266 143 aaKnown RBP13.78□□□□□ -0.2
TRIM27-202ENST00000377199 NCMAPQ5T1S8 102 aa13.78□□□□□ -0.2
TRIM27-202ENST00000377199 FBXW9Q5XUX1 488 aa13.78□□□□□ -0.2
TRIM27-202ENST00000377199 LFNGQ8NES3 379 aa13.78□□□□□ -0.2
TRIM27-202ENST00000377199 RAB39BQ96DA2 213 aa13.78□□□□□ -0.2
TRIM27-202ENST00000377199 PLPPR2Q96GM1 343 aa13.78□□□□□ -0.2
TRIM27-202ENST00000377199 ATP5SQ99766 215 aa13.78□□□□□ -0.2
TRIM27-202ENST00000377199 OR51I2Q9H344 312 aa13.78□□□□□ -0.2
TRIM27-202ENST00000377199 MPC1Q9Y5U8 109 aa13.78□□□□□ -0.2
TRIM27-202ENST00000377199 DOCK11Q5JSL3 2073 aa13.78□□□□□ -0.2
TRIM27-202ENST00000377199 TTC28Q96AY4 2481 aa13.78□□□□□ -0.2
TRIM27-202ENST00000377199 HMGB3O15347 200 aaKnown RBP13.77□□□□□ -0.2
TRIM27-202ENST00000377199 IFNA5P01569 189 aa13.77□□□□□ -0.2
TRIM27-202ENST00000377199 IGKV1-39P01597 117 aa13.77□□□□□ -0.2
TRIM27-202ENST00000377199 IGKV1D-39P04432 117 aa13.77□□□□□ -0.2
TRIM27-202ENST00000377199 COX5BP10606 129 aa13.77□□□□□ -0.2
TRIM27-202ENST00000377199 OR8G2PQ6IF36 304 aa13.77□□□□□ -0.2
TRIM27-202ENST00000377199 TPRX1Q8N7U7 411 aa13.77□□□□□ -0.2
TRIM27-202ENST00000377199 CNEP1R1Q8N9A8 125 aa13.77□□□□□ -0.2
TRIM27-202ENST00000377199 OR5B21A6NL26 309 aa13.77□□□□□ -0.21
TRIM27-202ENST00000377199 UCP2P55851 309 aa13.77□□□□□ -0.21
TRIM27-202ENST00000377199 HES3Q5TGS1 186 aa13.77□□□□□ -0.21
TRIM27-202ENST00000377199 Q6ZS49 121 aa13.77□□□□□ -0.21
TRIM27-202ENST00000377199 H1FOOQ8IZA3 346 aaPredicted RBP13.77□□□□□ -0.21
TRIM27-202ENST00000377199 LILRB2Q8N423 598 aa13.77□□□□□ -0.21
TRIM27-202ENST00000377199 ZNF561Q8N587 486 aa13.77□□□□□ -0.21
TRIM27-202ENST00000377199 GPR87Q9BY21 358 aa13.77□□□□□ -0.21
TRIM27-202ENST00000377199 PLK3Q9H4B4 646 aa13.77□□□□□ -0.21
TRIM27-202ENST00000377199 UFSP2Q9NUQ7 469 aa13.77□□□□□ -0.21
TRIM27-202ENST00000377199 TINAGQ9UJW2 476 aa13.77□□□□□ -0.21
TRIM27-202ENST00000377199 KLF13Q9Y2Y9 288 aaPredicted RBP13.77□□□□□ -0.21
TRIM27-202ENST00000377199 WSB1Q9Y6I7 421 aa13.77□□□□□ -0.21
TRIM27-202ENST00000377199 TRGV5A0A0B4J1U4 118 aa13.77□□□□□ -0.21
TRIM27-202ENST00000377199 WNT9BO14905 357 aa13.77□□□□□ -0.21
TRIM27-202ENST00000377199 AGFG2O95081 481 aa13.77□□□□□ -0.21
TRIM27-202ENST00000377199 TBC1D28Q2M2D7 210 aa13.77□□□□□ -0.21
TRIM27-202ENST00000377199 CDH20Q9HBT6 801 aa13.77□□□□□ -0.21
TRIM27-202ENST00000377199 OBP2BQ9NPH6 170 aa13.77□□□□□ -0.21
TRIM27-202ENST00000377199 PSENENQ9NZ42 101 aa13.77□□□□□ -0.21
TRIM27-202ENST00000377199 UBE2NP61088 152 aaKnown RBP13.76□□□□□ -0.21
TRIM27-202ENST00000377199 ARL16Q0P5N6 197 aa13.76□□□□□ -0.21
TRIM27-202ENST00000377199 ZNF429Q86V71 674 aa13.76□□□□□ -0.21
TRIM27-202ENST00000377199 GNPNAT1Q96EK6 184 aaPredicted RBP13.76□□□□□ -0.21
TRIM27-202ENST00000377199 CACNA1HO95180 2353 aa13.76□□□□□ -0.21
TRIM27-202ENST00000377199 ICE1Q9Y2F5 2266 aa13.76□□□□□ -0.21
TRIM27-202ENST00000377199 J3QT63 122 aa13.76□□□□□ -0.21
TRIM27-202ENST00000377199 SS18L1O75177 396 aaPredicted RBP13.76□□□□□ -0.21
TRIM27-202ENST00000377199 CD46P15529 392 aa13.76□□□□□ -0.21
TRIM27-202ENST00000377199 PPP1CBP62140 327 aa13.76□□□□□ -0.21
TRIM27-202ENST00000377199 RAB11AP62491 216 aa13.76□□□□□ -0.21
TRIM27-202ENST00000377199 ZNF816Q0VGE8 651 aaPredicted RBP13.76□□□□□ -0.21
TRIM27-202ENST00000377199 IL24Q13007 206 aa13.76□□□□□ -0.21
TRIM27-202ENST00000377199 TESK1Q15569 626 aa13.76□□□□□ -0.21
TRIM27-202ENST00000377199 LTC4SQ16873 150 aa13.76□□□□□ -0.21
TRIM27-202ENST00000377199 ZNF295-AS1Q8N0V1 137 aa13.76□□□□□ -0.21
TRIM27-202ENST00000377199 SCGB1C1Q8TD33 95 aa13.76□□□□□ -0.21
TRIM27-202ENST00000377199 RTL8AQ9BWD3 113 aa13.76□□□□□ -0.21
TRIM27-202ENST00000377199 RIMS4Q9H426 269 aaPredicted RBP13.76□□□□□ -0.21
TRIM27-202ENST00000377199 ARHGAP21Q5T5U3 1957 aa13.76□□□□□ -0.21
TRIM27-202ENST00000377199 USF3Q68DE3 2245 aa13.76□□□□□ -0.21
TRIM27-202ENST00000377199 KRASP01116 189 aa13.75□□□□□ -0.21
TRIM27-202ENST00000377199 CD59P13987 128 aa13.75□□□□□ -0.21
TRIM27-202ENST00000377199 DLK1P80370 383 aa13.75□□□□□ -0.21
TRIM27-202ENST00000377199 SRSF6Q13247 344 aaKnown RBP13.75□□□□□ -0.21
TRIM27-202ENST00000377199 RHEBQ15382 184 aa13.75□□□□□ -0.21
TRIM27-202ENST00000377199 SPINK9Q5DT21 86 aa13.75□□□□□ -0.21
TRIM27-202ENST00000377199 SLC25A40Q8TBP6 338 aa13.75□□□□□ -0.21
TRIM27-202ENST00000377199 BCL2L2Q92843 193 aaPredicted RBP13.75□□□□□ -0.21
TRIM27-202ENST00000377199 ZNF665Q9H7R5 613 aa13.75□□□□□ -0.21
TRIM27-202ENST00000377199 PCNX2A6NKB5 2137 aa13.75□□□□□ -0.21
TRIM27-202ENST00000377199 C21orf140B9A014 251 aa13.75□□□□□ -0.21
TRIM27-202ENST00000377199 SYNGR2O43760 224 aa13.75□□□□□ -0.21
TRIM27-202ENST00000377199 SCAF4O95104 1147 aaKnown RBP13.75□□□□□ -0.21
TRIM27-202ENST00000377199 IGKV1-5P01602 117 aa13.75□□□□□ -0.21
TRIM27-202ENST00000377199 IGLV2-14P01704 120 aa13.75□□□□□ -0.21
TRIM27-202ENST00000377199 S100A9P06702 114 aaKnown RBP13.75□□□□□ -0.21
TRIM27-202ENST00000377199 LINC00205P59089 165 aa13.75□□□□□ -0.21
TRIM27-202ENST00000377199 ICAM4Q14773 271 aa13.75□□□□□ -0.21
TRIM27-202ENST00000377199 NANOS1Q8WY41 292 aaKnown RBP13.75□□□□□ -0.21
TRIM27-202ENST00000377199 SMG1Q96Q15 3661 aaKnown RBP13.75□□□□□ -0.21
TRIM27-202ENST00000377199 CEP250Q9BV73 2442 aa13.75□□□□□ -0.21
TRIM27-202ENST00000377199 C5orf52A6NGY3 159 aa13.74□□□□□ -0.21
TRIM27-202ENST00000377199 SRP19P09132 144 aaKnown RBP13.74□□□□□ -0.21
TRIM27-202ENST00000377199 TAS2R30P59541 319 aa13.74□□□□□ -0.21
TRIM27-202ENST00000377199 TLE4Q04727 773 aa13.74□□□□□ -0.21
TRIM27-202ENST00000377199 BAXQ07812 192 aa13.74□□□□□ -0.21
TRIM27-202ENST00000377199 ZNF766Q5HY98 468 aa13.74□□□□□ -0.21
TRIM27-202ENST00000377199 Q6P435 159 aa13.74□□□□□ -0.21
TRIM27-202ENST00000377199 BTNL3Q6UXE8 466 aa13.74□□□□□ -0.21
TRIM27-202ENST00000377199 WDYHV1Q96HA8 205 aa13.74□□□□□ -0.21
TRIM27-202ENST00000377199 RPRMQ9NS64 109 aa13.74□□□□□ -0.21
TRIM27-202ENST00000377199 KIAA1456Q9P272 454 aa13.74□□□□□ -0.21
TRIM27-202ENST00000377199 RAMP3O60896 148 aa13.74□□□□□ -0.21
TRIM27-202ENST00000377199 RBMXL2O75526 392 aaKnown RBP13.74□□□□□ -0.21
TRIM27-202ENST00000377199 IFNA4P05014 189 aa13.74□□□□□ -0.21
TRIM27-202ENST00000377199 NIT2Q9NQR4 276 aa13.74□□□□□ -0.21
TRIM27-202ENST00000377199 IGHV3-43A0A0B4J1X8 118 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms