RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 AKAP6Q13023 2319 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 A8MWP6 167 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 K7EPK0 472 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 HOXC12P31275 282 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 PMELP40967 661 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 CD200P41217 278 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 ERVFRD-1P60508 538 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 NAAAQ02083 359 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 NHLH2Q02577 135 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 ARL6IP1Q15041 203 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 PIGYQ3MUY2 71 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 ANKRD39Q53RE8 183 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 AKR1C8PQ5T2L2 129 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 FAM71E2Q8N5Q1 922 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 ARL6IP6Q8N6S5 226 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 SAT2Q96F10 170 aaPredicted RBP9.09□□□□□ -0.95
TPM3-212ENST00000368533 IL36RNQ9UBH0 155 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 OR14J1Q9UGF5 321 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 AK3Q9UIJ7 227 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 RFNGQ9Y644 331 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 CHD3Q12873 2000 aaKnown RBP9.09□□□□□ -0.95
TPM3-212ENST00000368533 SHANK1Q9Y566 2161 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 KIAA2026Q5HYC2 2103 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 MARCH11A6NNE9 402 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 IGLV3-1P01715 115 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 CA6P23280 308 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 NPBWR2P48146 333 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 PIGPP57054 158 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 NKX6-1P78426 367 aaPredicted RBP9.09□□□□□ -0.95
TPM3-212ENST00000368533 FAM27E3Q08E93 113 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 LY6DQ14210 128 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 C22orf34Q6ZV56 151 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 FBXL14Q8N1E6 418 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 C17orf78Q8N4C9 275 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 OR1J1Q8NGS3 322 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 SNX22Q96L94 193 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 HS3ST6Q96QI5 342 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 PLSCR2Q9NRY7 297 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 KCNIP3Q9Y2W7 256 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 DIRAS3O95661 229 aa9.08□□□□□ -0.96
TPM3-212ENST00000368533 ZNF83P51522 516 aa9.08□□□□□ -0.96
TPM3-212ENST00000368533 TGFBR3Q03167 851 aa9.08□□□□□ -0.96
TPM3-212ENST00000368533 GABRA6Q16445 453 aa9.08□□□□□ -0.96
TPM3-212ENST00000368533 Q6ZT83 130 aa9.08□□□□□ -0.96
TPM3-212ENST00000368533 SLC25A26Q70HW3 274 aa9.08□□□□□ -0.96
TPM3-212ENST00000368533 SNHG12Q9BXW3 62 aa9.08□□□□□ -0.96
TPM3-212ENST00000368533 SLC5A7Q9GZV3 580 aa9.08□□□□□ -0.96
TPM3-212ENST00000368533 ZNF442Q9H7R0 627 aa9.08□□□□□ -0.96
TPM3-212ENST00000368533 KCNJ16Q9NPI9 418 aa9.08□□□□□ -0.96
TPM3-212ENST00000368533 CBLN4Q9NTU7 201 aa9.08□□□□□ -0.96
TPM3-212ENST00000368533 PPP1R14DQ9NXH3 145 aa9.08□□□□□ -0.96
TPM3-212ENST00000368533 ANXA10Q9UJ72 324 aa9.08□□□□□ -0.96
TPM3-212ENST00000368533 IGKV1-12A0A0C4DH73 117 aa9.08□□□□□ -0.96
TPM3-212ENST00000368533 FIGNL2A6NMB9 653 aa9.08□□□□□ -0.96
TPM3-212ENST00000368533 IFNL4K9M1U5 179 aa9.08□□□□□ -0.96
TPM3-212ENST00000368533 GEMIN2O14893 280 aaKnown RBP9.08□□□□□ -0.96
TPM3-212ENST00000368533 CNOT4O95628 575 aaKnown RBP9.08□□□□□ -0.96
TPM3-212ENST00000368533 IGKV1D-12P01611 117 aa9.08□□□□□ -0.96
TPM3-212ENST00000368533 ZNF728P0DKX0 622 aa9.08□□□□□ -0.96
TPM3-212ENST00000368533 RPL12P30050 165 aaKnown RBP9.08□□□□□ -0.96
TPM3-212ENST00000368533 ARR3P36575 388 aa9.08□□□□□ -0.96
TPM3-212ENST00000368533 FABP6P51161 128 aa9.08□□□□□ -0.96
TPM3-212ENST00000368533 PRDX4Q13162 271 aa9.08□□□□□ -0.96
TPM3-212ENST00000368533 CNN3Q15417 329 aaKnown RBP9.08□□□□□ -0.96
TPM3-212ENST00000368533 GGNBP1Q5YKI7 109 aa9.08□□□□□ -0.96
TPM3-212ENST00000368533 RPUSD3Q6P087 351 aaKnown RBP9.08□□□□□ -0.96
TPM3-212ENST00000368533 LHFPL1Q86WI0 220 aa9.08□□□□□ -0.96
TPM3-212ENST00000368533 OR5L1Q8NGL2 311 aa9.08□□□□□ -0.96
TPM3-212ENST00000368533 FRZBQ92765 325 aa9.08□□□□□ -0.96
TPM3-212ENST00000368533 MRPL24Q96A35 216 aaKnown RBP9.08□□□□□ -0.96
TPM3-212ENST00000368533 C1QTNF5Q9BXJ0 243 aa9.08□□□□□ -0.96
TPM3-212ENST00000368533 FGF23Q9GZV9 251 aaPredicted RBP9.08□□□□□ -0.96
TPM3-212ENST00000368533 CACNA1AO00555 2505 aa9.08□□□□□ -0.96
TPM3-212ENST00000368533 AHRRA9YTQ3 701 aa9.07□□□□□ -0.96
TPM3-212ENST00000368533 OR7C1O76099 320 aaPredicted RBP9.07□□□□□ -0.96
TPM3-212ENST00000368533 SCAF4O95104 1147 aaKnown RBP9.07□□□□□ -0.96
TPM3-212ENST00000368533 CRYABP02511 175 aaKnown RBP9.07□□□□□ -0.96
TPM3-212ENST00000368533 TRGC1P0CF51 173 aa9.07□□□□□ -0.96
TPM3-212ENST00000368533 FCGR2CP31995 323 aa9.07□□□□□ -0.96
TPM3-212ENST00000368533 SULT1A2P50226 295 aa9.07□□□□□ -0.96
TPM3-212ENST00000368533 MALLQ13021 153 aa9.07□□□□□ -0.96
TPM3-212ENST00000368533 EIF5AL1Q6IS14 154 aaKnown RBP9.07□□□□□ -0.96
TPM3-212ENST00000368533 SLC22A25Q6T423 547 aa9.07□□□□□ -0.96
TPM3-212ENST00000368533 POC1AQ8NBT0 407 aa9.07□□□□□ -0.96
TPM3-212ENST00000368533 MALSU1Q96EH3 234 aa9.07□□□□□ -0.96
TPM3-212ENST00000368533 CDH20Q9HBT6 801 aa9.07□□□□□ -0.96
TPM3-212ENST00000368533 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.07□□□□□ -0.96
TPM3-212ENST00000368533 SLC7A11Q9UPY5 501 aa9.07□□□□□ -0.96
TPM3-212ENST00000368533 XRCC2O43543 280 aa9.07□□□□□ -0.96
TPM3-212ENST00000368533 SNCAP37840 140 aa9.07□□□□□ -0.96
TPM3-212ENST00000368533 EIF5AP63241 154 aaKnown RBP9.07□□□□□ -0.96
TPM3-212ENST00000368533 ZNF474Q6S9Z5 364 aaPredicted RBP9.07□□□□□ -0.96
TPM3-212ENST00000368533 MEX3BQ6ZN04 569 aaKnown RBP9.07□□□□□ -0.96
TPM3-212ENST00000368533 ABHD5Q8WTS1 349 aa9.07□□□□□ -0.96
TPM3-212ENST00000368533 Q96M66 194 aa9.07□□□□□ -0.96
TPM3-212ENST00000368533 ANAPC10Q9UM13 185 aa9.07□□□□□ -0.96
TPM3-212ENST00000368533 ST3GAL6Q9Y274 331 aa9.07□□□□□ -0.96
TPM3-212ENST00000368533 CACNA1DQ01668 2161 aa9.07□□□□□ -0.96
TPM3-212ENST00000368533 H0YL77 283 aa9.07□□□□□ -0.96
TPM3-212ENST00000368533 PRH1P02810 166 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms