RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 FBXL15Q9H469 300 aa12.41□□□□□ -0.42
NECTIN1-202ENST00000340882 IFT22Q9H7X7 185 aa12.41□□□□□ -0.42
NECTIN1-202ENST00000340882 ZNF446Q9NWS9 450 aa12.41□□□□□ -0.42
NECTIN1-202ENST00000340882 CNOT2Q9NZN8 540 aaKnown RBP12.41□□□□□ -0.42
NECTIN1-202ENST00000340882 GNG12Q9UBI6 72 aa12.41□□□□□ -0.42
NECTIN1-202ENST00000340882 ST3GAL6Q9Y274 331 aa12.41□□□□□ -0.42
NECTIN1-202ENST00000340882 ABCA13Q86UQ4 5058 aa12.41□□□□□ -0.42
NECTIN1-202ENST00000340882 SHISA3A0PJX4 238 aa12.4□□□□□ -0.42
NECTIN1-202ENST00000340882 DEDDO75618 318 aa12.4□□□□□ -0.42
NECTIN1-202ENST00000340882 HTR1AP08908 422 aa12.4□□□□□ -0.42
NECTIN1-202ENST00000340882 MNAT1P51948 309 aa12.4□□□□□ -0.42
NECTIN1-202ENST00000340882 GNMTQ14749 295 aa12.4□□□□□ -0.42
NECTIN1-202ENST00000340882 RSU1Q15404 277 aa12.4□□□□□ -0.42
NECTIN1-202ENST00000340882 ZNF660Q6AZW8 331 aaPredicted RBP12.4□□□□□ -0.42
NECTIN1-202ENST00000340882 PRR18Q8N4B5 295 aa12.4□□□□□ -0.42
NECTIN1-202ENST00000340882 OR9G4Q8NGQ1 327 aa12.4□□□□□ -0.42
NECTIN1-202ENST00000340882 CST11Q9H112 138 aa12.4□□□□□ -0.42
NECTIN1-202ENST00000340882 ARGLU1Q9NWB6 273 aaPredicted RBP12.4□□□□□ -0.42
NECTIN1-202ENST00000340882 FAM53CQ9NYF3 392 aa12.4□□□□□ -0.42
NECTIN1-202ENST00000340882 ANKRD34BA5PLL1 514 aa12.39□□□□□ -0.43
NECTIN1-202ENST00000340882 AIPO00170 330 aa12.39□□□□□ -0.43
NECTIN1-202ENST00000340882 FKBP6O75344 327 aa12.39□□□□□ -0.43
NECTIN1-202ENST00000340882 HBZP02008 142 aa12.39□□□□□ -0.43
NECTIN1-202ENST00000340882 CSN3P07498 182 aa12.39□□□□□ -0.43
NECTIN1-202ENST00000340882 ATP6V1E1P36543 226 aa12.39□□□□□ -0.43
NECTIN1-202ENST00000340882 CCR9P51686 369 aa12.39□□□□□ -0.43
NECTIN1-202ENST00000340882 RBM11P57052 281 aaKnown RBP12.39□□□□□ -0.43
NECTIN1-202ENST00000340882 SYNJ2BPP57105 145 aa12.39□□□□□ -0.43
NECTIN1-202ENST00000340882 EWSR1Q01844 656 aaKnown RBP eCLIP12.39□□□□□ -0.43
NECTIN1-202ENST00000340882 PMS2P11Q13670 270 aa12.39□□□□□ -0.43
NECTIN1-202ENST00000340882 ACTBL2Q562R1 376 aa12.39□□□□□ -0.43
NECTIN1-202ENST00000340882 CD200R1LQ6Q8B3 271 aa12.39□□□□□ -0.43
NECTIN1-202ENST00000340882 PARP16Q8N5Y8 322 aa12.39□□□□□ -0.43
NECTIN1-202ENST00000340882 DEFB125Q8N687 156 aa12.39□□□□□ -0.43
NECTIN1-202ENST00000340882 OR4K15Q8NH41 348 aa12.39□□□□□ -0.43
NECTIN1-202ENST00000340882 PELI1Q96FA3 418 aa12.39□□□□□ -0.43
NECTIN1-202ENST00000340882 FAM192AQ9GZU8 254 aa12.39□□□□□ -0.43
NECTIN1-202ENST00000340882 ERGIC3Q9Y282 383 aa12.39□□□□□ -0.43
NECTIN1-202ENST00000340882 A0A1W2PP11 408 aa12.38□□□□□ -0.43
NECTIN1-202ENST00000340882 AQP12BA6NM10 295 aa12.38□□□□□ -0.43
NECTIN1-202ENST00000340882 ARPC1BO15143 372 aaKnown RBP12.38□□□□□ -0.43
NECTIN1-202ENST00000340882 POLR2IP36954 125 aaKnown RBP12.38□□□□□ -0.43
NECTIN1-202ENST00000340882 OR3A3P47888 321 aa12.38□□□□□ -0.43
NECTIN1-202ENST00000340882 ALKBH1Q13686 389 aaKnown RBP12.38□□□□□ -0.43
NECTIN1-202ENST00000340882 MORN2Q502X0 79 aa12.38□□□□□ -0.43
NECTIN1-202ENST00000340882 ATAD3CQ5T2N8 411 aa12.38□□□□□ -0.43
NECTIN1-202ENST00000340882 SYT6Q5T7P8 510 aaPredicted RBP12.38□□□□□ -0.43
NECTIN1-202ENST00000340882 UNQ5815/PRO19632Q6UWF5 114 aa12.38□□□□□ -0.43
NECTIN1-202ENST00000340882 PPP1R27Q86WC6 154 aa12.38□□□□□ -0.43
NECTIN1-202ENST00000340882 SERPINA12Q8IW75 414 aa12.38□□□□□ -0.43
NECTIN1-202ENST00000340882 AQP12AQ8IXF9 295 aa12.38□□□□□ -0.43
NECTIN1-202ENST00000340882 TCTEX1D1Q8N7M0 179 aa12.38□□□□□ -0.43
NECTIN1-202ENST00000340882 LFNGQ8NES3 379 aa12.38□□□□□ -0.43
NECTIN1-202ENST00000340882 OR5D14Q8NGL3 314 aa12.38□□□□□ -0.43
NECTIN1-202ENST00000340882 OR52N1Q8NH53 320 aa12.38□□□□□ -0.43
NECTIN1-202ENST00000340882 ABHD5Q8WTS1 349 aa12.38□□□□□ -0.43
NECTIN1-202ENST00000340882 GATAD1Q8WUU5 269 aa12.38□□□□□ -0.43
NECTIN1-202ENST00000340882 TMEM106AQ96A25 262 aa12.38□□□□□ -0.43
NECTIN1-202ENST00000340882 NRBF2Q96F24 287 aa12.38□□□□□ -0.43
NECTIN1-202ENST00000340882 RDH12Q96NR8 316 aa12.38□□□□□ -0.43
NECTIN1-202ENST00000340882 GPER1Q99527 375 aa12.38□□□□□ -0.43
NECTIN1-202ENST00000340882 RANGRFQ9HD47 186 aaPredicted RBP12.38□□□□□ -0.43
NECTIN1-202ENST00000340882 J3QRE1 110 aa12.37□□□□□ -0.43
NECTIN1-202ENST00000340882 FAM107AO95990 144 aa12.37□□□□□ -0.43
NECTIN1-202ENST00000340882 TRGV3P03979 118 aa12.37□□□□□ -0.43
NECTIN1-202ENST00000340882 CSTBP04080 98 aaKnown RBP12.37□□□□□ -0.43
NECTIN1-202ENST00000340882 CD7P09564 240 aa12.37□□□□□ -0.43
NECTIN1-202ENST00000340882 RCC1P18754 421 aaPredicted RBP12.37□□□□□ -0.43
NECTIN1-202ENST00000340882 MECP2P51608 486 aaKnown RBP12.37□□□□□ -0.43
NECTIN1-202ENST00000340882 CD81P60033 236 aa12.37□□□□□ -0.43
NECTIN1-202ENST00000340882 DEFA5Q01523 94 aa12.37□□□□□ -0.43
NECTIN1-202ENST00000340882 NHLRC3Q5JS37 347 aa12.37□□□□□ -0.43
NECTIN1-202ENST00000340882 LCN12Q6JVE5 192 aa12.37□□□□□ -0.43
NECTIN1-202ENST00000340882 PYHIN1Q6K0P9 492 aa12.37□□□□□ -0.43
NECTIN1-202ENST00000340882 ZNF529Q6P280 563 aa12.37□□□□□ -0.43
NECTIN1-202ENST00000340882 OR52L2PQ8NGH6 319 aa12.37□□□□□ -0.43
NECTIN1-202ENST00000340882 NEK7Q8TDX7 302 aa12.37□□□□□ -0.43
NECTIN1-202ENST00000340882 J3QLW9 94 aa12.36□□□□□ -0.43
NECTIN1-202ENST00000340882 RRHO14718 337 aa12.36□□□□□ -0.43
NECTIN1-202ENST00000340882 SLC16A6O15403 523 aa12.36□□□□□ -0.43
NECTIN1-202ENST00000340882 SPINT2O43291 252 aa12.36□□□□□ -0.43
NECTIN1-202ENST00000340882 TRBV12-3P01733 135 aa12.36□□□□□ -0.43
NECTIN1-202ENST00000340882 ZNF19P17023 458 aa12.36□□□□□ -0.43
NECTIN1-202ENST00000340882 ZP3P21754 424 aa12.36□□□□□ -0.43
NECTIN1-202ENST00000340882 DYRK1AQ13627 763 aa12.36□□□□□ -0.43
NECTIN1-202ENST00000340882 AKIRIN2Q53H80 203 aa12.36□□□□□ -0.43
NECTIN1-202ENST00000340882 STEAP3Q658P3 488 aa12.36□□□□□ -0.43
NECTIN1-202ENST00000340882 ZNF833PQ6ZTB9 187 aa12.36□□□□□ -0.43
NECTIN1-202ENST00000340882 Q8N402 240 aa12.36□□□□□ -0.43
NECTIN1-202ENST00000340882 CLCC1Q96S66 551 aa12.36□□□□□ -0.43
NECTIN1-202ENST00000340882 NEURL2Q9BR09 285 aa12.36□□□□□ -0.43
NECTIN1-202ENST00000340882 TRAPPC2LQ9UL33 140 aa12.36□□□□□ -0.43
NECTIN1-202ENST00000340882 ING4Q9UNL4 249 aa12.36□□□□□ -0.43
NECTIN1-202ENST00000340882 CXorf65A6NEN9 183 aa12.35□□□□□ -0.43
NECTIN1-202ENST00000340882 SERPINA2P20848 420 aa12.35□□□□□ -0.43
NECTIN1-202ENST00000340882 PPP1CCP36873 323 aaKnown RBP12.35□□□□□ -0.43
NECTIN1-202ENST00000340882 TMEM267Q0VDI3 215 aaPredicted RBP12.35□□□□□ -0.43
NECTIN1-202ENST00000340882 KDM4DQ6B0I6 523 aa12.35□□□□□ -0.43
NECTIN1-202ENST00000340882 FAM131AQ6UXB0 335 aa12.35□□□□□ -0.43
NECTIN1-202ENST00000340882 KCTD20Q7Z5Y7 419 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms