RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 A6NHS1 94 aa11.18□□□□□ -0.62
RPP40-201ENST00000319533 NUDT19A8MXV4 375 aa11.18□□□□□ -0.62
RPP40-201ENST00000319533 IGKV1D-33P01593 117 aa11.18□□□□□ -0.62
RPP40-201ENST00000319533 IGKV1-33P01594 117 aa11.18□□□□□ -0.62
RPP40-201ENST00000319533 HSMCR30P0CW71 290 aa11.18□□□□□ -0.62
RPP40-201ENST00000319533 PSMB9P28065 219 aa11.18□□□□□ -0.62
RPP40-201ENST00000319533 HES1Q14469 280 aa11.18□□□□□ -0.62
RPP40-201ENST00000319533 SYT6Q5T7P8 510 aaPredicted RBP11.18□□□□□ -0.62
RPP40-201ENST00000319533 GLIPR1L1Q6UWM5 242 aa11.18□□□□□ -0.62
RPP40-201ENST00000319533 FOXRED2Q8IWF2 684 aa11.18□□□□□ -0.62
RPP40-201ENST00000319533 IZUMO1Q8IYV9 350 aa11.18□□□□□ -0.62
RPP40-201ENST00000319533 Q8N6K4 173 aa11.18□□□□□ -0.62
RPP40-201ENST00000319533 UQCC2Q9BRT2 126 aa11.18□□□□□ -0.62
RPP40-201ENST00000319533 DPCDQ9BVM2 203 aaPredicted RBP11.18□□□□□ -0.62
RPP40-201ENST00000319533 RBM38Q9H0Z9 239 aaKnown RBP11.18□□□□□ -0.62
RPP40-201ENST00000319533 IFT22Q9H7X7 185 aa11.18□□□□□ -0.62
RPP40-201ENST00000319533 SPACA1Q9HBV2 294 aa11.18□□□□□ -0.62
RPP40-201ENST00000319533 LINC00527Q9UJ94 153 aa11.18□□□□□ -0.62
RPP40-201ENST00000319533 DNAH7Q8WXX0 4024 aa11.17□□□□□ -0.62
RPP40-201ENST00000319533 LINC01548A6NM66 108 aa11.17□□□□□ -0.62
RPP40-201ENST00000319533 CCL24O00175 119 aa11.17□□□□□ -0.62
RPP40-201ENST00000319533 GEMIN2O14893 280 aaKnown RBP11.17□□□□□ -0.62
RPP40-201ENST00000319533 IGHV3-7P01780 117 aa11.17□□□□□ -0.62
RPP40-201ENST00000319533 HNF4GQ14541 408 aa11.17□□□□□ -0.62
RPP40-201ENST00000319533 KIR2DS1Q14954 304 aa11.17□□□□□ -0.62
RPP40-201ENST00000319533 SSX1Q16384 188 aa11.17□□□□□ -0.62
RPP40-201ENST00000319533 PNLIPRP3Q17RR3 467 aa11.17□□□□□ -0.62
RPP40-201ENST00000319533 LINC01559Q495D7 138 aa11.17□□□□□ -0.62
RPP40-201ENST00000319533 HSD17B12Q53GQ0 312 aa11.17□□□□□ -0.62
RPP40-201ENST00000319533 ATAD3CQ5T2N8 411 aa11.17□□□□□ -0.62
RPP40-201ENST00000319533 LIPKQ5VXJ0 399 aa11.17□□□□□ -0.62
RPP40-201ENST00000319533 TEX38Q6PEX7 206 aa11.17□□□□□ -0.62
RPP40-201ENST00000319533 CEACAM19Q7Z692 300 aa11.17□□□□□ -0.62
RPP40-201ENST00000319533 TGIF2LXQ8IUE1 241 aa11.17□□□□□ -0.62
RPP40-201ENST00000319533 C8orf31Q8N9H6 132 aa11.17□□□□□ -0.62
RPP40-201ENST00000319533 SUMF2Q8NBJ7 301 aa11.17□□□□□ -0.62
RPP40-201ENST00000319533 PLPPR1Q8TBJ4 325 aa11.17□□□□□ -0.62
RPP40-201ENST00000319533 PHYHIPQ92561 330 aa11.17□□□□□ -0.62
RPP40-201ENST00000319533 FCGR1BQ92637 280 aa11.17□□□□□ -0.62
RPP40-201ENST00000319533 YIPF6Q96EC8 236 aa11.17□□□□□ -0.62
RPP40-201ENST00000319533 MRPS24Q96EL2 167 aaKnown RBP11.17□□□□□ -0.62
RPP40-201ENST00000319533 EAF1Q96JC9 268 aaPredicted RBP11.17□□□□□ -0.62
RPP40-201ENST00000319533 NAA50Q9GZZ1 169 aaKnown RBP11.17□□□□□ -0.62
RPP40-201ENST00000319533 ABCG5Q9H222 651 aa11.17□□□□□ -0.62
RPP40-201ENST00000319533 VCX3AQ9NNX9 186 aa11.17□□□□□ -0.62
RPP40-201ENST00000319533 LIN7CQ9NUP9 197 aaKnown RBP11.17□□□□□ -0.62
RPP40-201ENST00000319533 U3KQK5 164 aa11.17□□□□□ -0.62
RPP40-201ENST00000319533 IGHV1-3A0A0C4DH29 117 aa11.16□□□□□ -0.62
RPP40-201ENST00000319533 A0A1W2PP11 408 aa11.16□□□□□ -0.62
RPP40-201ENST00000319533 AP4M1O00189 453 aa11.16□□□□□ -0.62
RPP40-201ENST00000319533 HSD17B6O14756 317 aa11.16□□□□□ -0.62
RPP40-201ENST00000319533 PSMA1P25786 263 aaKnown RBP11.16□□□□□ -0.62
RPP40-201ENST00000319533 SSTR5P35346 364 aa11.16□□□□□ -0.62
RPP40-201ENST00000319533 GPR12P47775 334 aa11.16□□□□□ -0.62
RPP40-201ENST00000319533 CDX1P47902 265 aaPredicted RBP11.16□□□□□ -0.62
RPP40-201ENST00000319533 MLLT11Q13015 90 aaPredicted RBP11.16□□□□□ -0.62
RPP40-201ENST00000319533 INSL4Q14641 139 aa11.16□□□□□ -0.62
RPP40-201ENST00000319533 TRAM1Q15629 374 aa11.16□□□□□ -0.62
RPP40-201ENST00000319533 NKAPLQ5M9Q1 402 aa11.16□□□□□ -0.62
RPP40-201ENST00000319533 GLT8D1Q68CQ7 371 aa11.16□□□□□ -0.62
RPP40-201ENST00000319533 GPR141Q7Z602 305 aa11.16□□□□□ -0.62
RPP40-201ENST00000319533 LINC00311Q8N616 119 aa11.16□□□□□ -0.62
RPP40-201ENST00000319533 Q8N9W7 124 aa11.16□□□□□ -0.62
RPP40-201ENST00000319533 OR10X1Q8NGY0 326 aa11.16□□□□□ -0.62
RPP40-201ENST00000319533 RFESDQ8TAC1 157 aa11.16□□□□□ -0.62
RPP40-201ENST00000319533 MRGPRDQ8TDS7 321 aa11.16□□□□□ -0.62
RPP40-201ENST00000319533 NEK7Q8TDX7 302 aa11.16□□□□□ -0.62
RPP40-201ENST00000319533 DUX3Q96PT4 197 aa11.16□□□□□ -0.62
RPP40-201ENST00000319533 MGLLQ99685 303 aa11.16□□□□□ -0.62
RPP40-201ENST00000319533 CST11Q9H112 138 aa11.16□□□□□ -0.62
RPP40-201ENST00000319533 ISYNA1Q9NPH2 558 aa11.16□□□□□ -0.62
RPP40-201ENST00000319533 GHRLQ9UBU3 117 aa11.16□□□□□ -0.62
RPP40-201ENST00000319533 TMEM30CPA0ZSE6 113 aa11.15□□□□□ -0.62
RPP40-201ENST00000319533 CCRL2O00421 344 aa11.15□□□□□ -0.62
RPP40-201ENST00000319533 CRTAPO75718 401 aaPredicted RBP11.15□□□□□ -0.62
RPP40-201ENST00000319533 GAPDHP04406 335 aaKnown RBP11.15□□□□□ -0.62
RPP40-201ENST00000319533 RPLP1P05386 114 aaKnown RBP11.15□□□□□ -0.62
RPP40-201ENST00000319533 ELANEP08246 267 aa11.15□□□□□ -0.62
RPP40-201ENST00000319533 UBBP0CG47 229 aa11.15□□□□□ -0.62
RPP40-201ENST00000319533 GZMHP20718 246 aa11.15□□□□□ -0.62
RPP40-201ENST00000319533 GNG10P50151 68 aa11.15□□□□□ -0.62
RPP40-201ENST00000319533 CFHR3Q02985 330 aa11.15□□□□□ -0.62
RPP40-201ENST00000319533 FOXE3Q13461 319 aa11.15□□□□□ -0.62
RPP40-201ENST00000319533 TPBGQ13641 420 aa11.15□□□□□ -0.62
RPP40-201ENST00000319533 FAM27D1Q5T7N8 215 aa11.15□□□□□ -0.62
RPP40-201ENST00000319533 C9orf66Q5T8R8 295 aa11.15□□□□□ -0.62
RPP40-201ENST00000319533 TMEM104Q8NE00 496 aa11.15□□□□□ -0.62
RPP40-201ENST00000319533 OR52M1Q8NGK5 317 aa11.15□□□□□ -0.62
RPP40-201ENST00000319533 OR8U1Q8NH10 309 aa11.15□□□□□ -0.62
RPP40-201ENST00000319533 TMEM203Q969S6 136 aa11.15□□□□□ -0.62
RPP40-201ENST00000319533 ST6GALNAC6Q969X2 333 aa11.15□□□□□ -0.62
RPP40-201ENST00000319533 GON7Q9BXV9 100 aa11.15□□□□□ -0.62
RPP40-201ENST00000319533 SELENOIQ9C0D9 397 aa11.15□□□□□ -0.62
RPP40-201ENST00000319533 PLSCR3Q9NRY6 295 aa11.15□□□□□ -0.62
RPP40-201ENST00000319533 ZNF580Q9UK33 172 aa11.15□□□□□ -0.62
RPP40-201ENST00000319533 CEPT1Q9Y6K0 416 aa11.15□□□□□ -0.62
RPP40-201ENST00000319533 RYR2Q92736 4967 aa11.14□□□□□ -0.63
RPP40-201ENST00000319533 C15orf65H3BRN8 121 aa11.14□□□□□ -0.63
RPP40-201ENST00000319533 ARL6IP5O75915 188 aa11.14□□□□□ -0.63
RPP40-201ENST00000319533 UCHL1P09936 223 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms