RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 CLDN12P56749 244 aa5.19□□□□□ -1.58
SEC22A-201ENST00000309934 RAB11AP62491 216 aa5.19□□□□□ -1.58
SEC22A-201ENST00000309934 INPP5JQ15735 1006 aaPredicted RBP5.19□□□□□ -1.58
SEC22A-201ENST00000309934 UBE2V2Q15819 145 aa5.19□□□□□ -1.58
SEC22A-201ENST00000309934 VAX1Q5SQQ9 334 aa5.19□□□□□ -1.58
SEC22A-201ENST00000309934 FBXW12Q6X9E4 464 aa5.19□□□□□ -1.58
SEC22A-201ENST00000309934 SPACA3Q8IXA5 215 aa5.19□□□□□ -1.58
SEC22A-201ENST00000309934 FBXL14Q8N1E6 418 aa5.19□□□□□ -1.58
SEC22A-201ENST00000309934 ZIC4Q8N9L1 334 aa5.19□□□□□ -1.58
SEC22A-201ENST00000309934 MARS2Q96GW9 593 aaKnown RBP5.19□□□□□ -1.58
SEC22A-201ENST00000309934 SLC35E1Q96K37 410 aa5.19□□□□□ -1.58
SEC22A-201ENST00000309934 HARBI1Q96MB7 349 aa5.19□□□□□ -1.58
SEC22A-201ENST00000309934 ZNF75AQ96N20 296 aa5.19□□□□□ -1.58
SEC22A-201ENST00000309934 ST6GALNAC5Q9BVH7 336 aa5.19□□□□□ -1.58
SEC22A-201ENST00000309934 TM2D1Q9BX74 207 aa5.19□□□□□ -1.58
SEC22A-201ENST00000309934 MS4A5Q9H3V2 200 aa5.19□□□□□ -1.58
SEC22A-201ENST00000309934 DLL4Q9NR61 685 aa5.19□□□□□ -1.58
SEC22A-201ENST00000309934 CLCF1Q9UBD9 225 aa5.19□□□□□ -1.58
SEC22A-201ENST00000309934 ATP23Q9Y6H3 246 aa5.19□□□□□ -1.58
SEC22A-201ENST00000309934 ARID1AO14497 2285 aa5.19□□□□□ -1.58
SEC22A-201ENST00000309934 ZNF318Q5VUA4 2279 aa5.19□□□□□ -1.58
SEC22A-201ENST00000309934 CHD8Q9HCK8 2581 aa5.19□□□□□ -1.58
SEC22A-201ENST00000309934 DUXBA0A1W2PPF3 345 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 KIAA1324LA8MWY0 1029 aaPredicted RBP5.18□□□□□ -1.58
SEC22A-201ENST00000309934 E9PLN8 166 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 RNASEK-C17orf49H0YIS7 233 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 FBXO24O75426 580 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 CD3EP07766 207 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 SLC6A1P30531 599 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 OR10J1P30954 320 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 OTX1P32242 354 aaPredicted RBP5.18□□□□□ -1.58
SEC22A-201ENST00000309934 KIR2DS2P43631 304 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 ACOT7LQ6ZUV0 252 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 MDP1Q86V88 176 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 CASTOR1Q8WTX7 329 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 SPSB4Q96A44 273 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 VKORC1Q9BQB6 163 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 SCNM1Q9BWG6 230 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 SLC25A31Q9H0C2 315 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 PROK2Q9HC23 129 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 TRAPPC2LQ9UL33 140 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 RNF150Q9ULK6 438 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 SZT2Q5T011 3432 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 NINQ8N4C6 2090 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 C7orf77A4D0Y5 90 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 BDP1A6H8Y1 2624 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 PPP5D1E7EU14 171 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 MPC2O95563 127 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 GCGP01275 180 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 IGHV3-9P01782 118 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 CRYGSP22914 178 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 RPS27P42677 84 aaKnown RBP5.18□□□□□ -1.58
SEC22A-201ENST00000309934 SNU13P55769 128 aaKnown RBP5.18□□□□□ -1.58
SEC22A-201ENST00000309934 UCP2P55851 309 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 ERVK-16P61578 105 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 DGCR2P98153 550 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 TESK1Q15569 626 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 MICBQ29980 383 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 LAMTOR1Q6IAA8 161 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 TMEM182Q6ZP80 229 aaPredicted RBP5.18□□□□□ -1.58
SEC22A-201ENST00000309934 SLC25A26Q70HW3 274 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 OR10AD1Q8NGE0 317 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 OR4A4PQ8NGN8 299 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 MITD1Q8WV92 249 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 TMED6Q8WW62 240 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 MBD3L1Q8WWY6 194 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 DCUN1D4Q92564 292 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 HIST1H2BAQ96A08 127 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 ATP6V0BQ99437 205 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 NPDC1Q9NQX5 325 aaPredicted RBP5.18□□□□□ -1.58
SEC22A-201ENST00000309934 GAGE10A6NGK3 116 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 H3BSH0 61 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 HOXA5P20719 270 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 NTF3P20783 257 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 TDGF1P3P51864 188 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 F2RL1P55085 397 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 FGF12P61328 243 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 TMEM267Q0VDI3 215 aaPredicted RBP5.18□□□□□ -1.58
SEC22A-201ENST00000309934 TBR1Q16650 682 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 FBLN7Q53RD9 439 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 ZNF695Q8IW36 515 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 SMIM20Q8N5G0 67 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 UPRTQ96BW1 309 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 SAT2Q96F10 170 aaPredicted RBP5.18□□□□□ -1.58
SEC22A-201ENST00000309934 TBX15Q96SF7 602 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 NIPSNAP3BQ9BS92 247 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 PLEKHF2Q9H8W4 249 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 TMEM140Q9NV12 185 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 KCNS2Q9ULS6 477 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 NPTNQ9Y639 398 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 MEIKINA0A087WXM9 373 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 hCG_38984A0A1B0GV85 526 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 A0A1W2PPV4 95 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 TMEM14DPA8MWL7 114 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 HSD17B6O14756 317 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 SERPINE2P07093 398 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 MPZP25189 248 aa5.18□□□□□ -1.58
SEC22A-201ENST00000309934 HINT1P49773 126 aaPredicted RBP5.18□□□□□ -1.58
SEC22A-201ENST00000309934 RPS11P62280 158 aaKnown RBP eCLIP5.18□□□□□ -1.58
SEC22A-201ENST00000309934 RNFT1Q5M7Z0 435 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms