RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 TMSB15BA0A087X1C1 80 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 TSPAN13O95857 204 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 FCGR3AP08637 254 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 MEF2CQ06413 473 aaPredicted RBP7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 HERPUD1Q15011 391 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 LYPD8Q6UX82 237 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 FZR1Q9UM11 496 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 EIF3GO75821 320 aaKnown RBP eCLIP7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 F12P00748 615 aaPredicted RBP7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 TMIGD3P0DMS9 266 aaPredicted RBP7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 RAB9AP51151 201 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 AMER3Q8N944 861 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 RHOVQ96L33 236 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 TMEM222Q9H0R3 208 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 INSIG2Q9Y5U4 225 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 CITO14578 2027 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 A0A1W2PR80 420 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 SOD3P08294 240 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 CBLN3Q6UW01 205 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 STPG3Q8N7X2 389 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 CITED2Q99967 270 aaPredicted RBP7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 SFXN3Q9BWM7 321 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 PLA2G3Q9NZ20 509 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 KCNE5Q9UJ90 142 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 TEX30Q5JUR7 227 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 TCF24Q7RTU0 167 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 FAM169BQ8N8A8 192 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 C19orf24Q9BVV8 132 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 N4BP2Q86UW6 1770 aaPredicted RBP7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 IGHV1OR21-1A0A087WYE8 117 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 FAM157AC9JC47 383 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 CDIPTO14735 213 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 CXCL10P02778 98 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 PRSS8Q16651 343 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 FAM53AQ6NSI3 398 aaPredicted RBP7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 GCSAMQ8N6F7 178 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 FAM117AQ9C073 453 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 AURKAIP1Q9NWT8 199 aaPredicted RBP7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 GPR132Q9UNW8 380 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 MOB4Q9Y3A3 225 aa7.6□□□□□ -1.19
SCUBE3-201ENST00000274938 H7C2G1 150 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 LYZL6O75951 148 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 CFDP00746 253 aaPredicted RBP7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 RND1Q92730 232 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 KCNK7Q9Y2U2 307 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 DLL1O00548 723 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 AGAP20933 346 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 INO80CQ6PI98 192 aaPredicted RBP7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 OR10J6PQ8NGY7 276 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 SFRP2Q96HF1 295 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 PARLQ9H300 379 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 GPR35Q9HC97 309 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 TGIF2-C20orf24A0A0A6YYL0 155 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 LIPFP07098 398 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 HKR1P10072 659 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 MDKP21741 143 aaPredicted RBP7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 PSG9Q00887 426 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 ROM1Q03395 351 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 MOGAT3Q86VF5 341 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 WNT16Q9UBV4 365 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 PCOLCE2Q9UKZ9 415 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 KIF13AQ9H1H9 1805 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 A0A1W2PPC1 479 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 A1L4Q6 167 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 TMPRSS2O15393 492 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 CT62P0C5K7 136 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 CCL2P13500 99 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 GALNT14Q96FL9 552 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 GLIPR1P48060 266 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 MNX1P50219 401 aaPredicted RBP7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 DCAF12L2Q5VW00 463 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 OR1K1Q8NGR3 316 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 HIST1H2BAQ96A08 127 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 FOXQ1Q9C009 403 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 CBLN4Q9NTU7 201 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 RABAC1Q9UI14 185 aa7.59□□□□□ -1.19
SCUBE3-201ENST00000274938 A0A1W2PS18 150 aa7.59□□□□□ -1.2
SCUBE3-201ENST00000274938 NUDT3O95989 172 aa7.59□□□□□ -1.2
SCUBE3-201ENST00000274938 MT-CO3P00414 261 aa7.59□□□□□ -1.2
SCUBE3-201ENST00000274938 EFNB2P52799 333 aa7.59□□□□□ -1.2
SCUBE3-201ENST00000274938 RUNX1Q01196 453 aa7.59□□□□□ -1.2
SCUBE3-201ENST00000274938 ZNF506Q5JVG8 444 aa7.59□□□□□ -1.2
SCUBE3-201ENST00000274938 RHBDD2Q6NTF9 364 aa7.59□□□□□ -1.2
SCUBE3-201ENST00000274938 MBD3L1Q8WWY6 194 aa7.59□□□□□ -1.2
SCUBE3-201ENST00000274938 TAF15Q92804 592 aaKnown RBP eCLIP7.59□□□□□ -1.2
SCUBE3-201ENST00000274938 TMUB1Q9BVT8 246 aa7.59□□□□□ -1.2
SCUBE3-201ENST00000274938 A0A1B0GV90 55 aa7.58□□□□□ -1.2
SCUBE3-201ENST00000274938 CEACAM18A8MTB9 384 aa7.58□□□□□ -1.2
SCUBE3-201ENST00000274938 ERVH48-1M5A8F1 160 aa7.58□□□□□ -1.2
SCUBE3-201ENST00000274938 UBE2L6O14933 153 aa7.58□□□□□ -1.2
SCUBE3-201ENST00000274938 PATE4P0C8F1 98 aa7.58□□□□□ -1.2
SCUBE3-201ENST00000274938 MC5RP33032 325 aa7.58□□□□□ -1.2
SCUBE3-201ENST00000274938 PIGYQ3MUY2 71 aa7.58□□□□□ -1.2
SCUBE3-201ENST00000274938 EBLN2Q6P2I7 272 aa7.58□□□□□ -1.2
SCUBE3-201ENST00000274938 QTRT1Q9BXR0 403 aaKnown RBP7.58□□□□□ -1.2
SCUBE3-201ENST00000274938 ZNF430Q9H8G1 570 aaPredicted RBP7.58□□□□□ -1.2
SCUBE3-201ENST00000274938 SOX21Q9Y651 276 aaPredicted RBP7.58□□□□□ -1.2
SCUBE3-201ENST00000274938 RPS11P62280 158 aaKnown RBP eCLIP7.58□□□□□ -1.2
SCUBE3-201ENST00000274938 ZP4Q12836 540 aa7.58□□□□□ -1.2
SCUBE3-201ENST00000274938 TRBV23-1A0A0A0MS06 115 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms