RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Gfod2Q9CYH5 385 aa13.7□□□□□ -0.22
Trim39-203ENSMUST00000113706 Iqcf5Q9DAL7 148 aa13.7□□□□□ -0.22
Trim39-203ENSMUST00000113706 Igkv13-84A0A140T8N3 115 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 NgfP01139 241 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 Vamp1Q62442 118 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 March1Q6NZQ8 289 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 Gpr137Q80ZU9 396 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 LmlnQ8BMN4 681 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 Q8BTC1 67 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 Gltpd2Q8K0R6 321 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 Vmn1r73Q8R293 303 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 GmppaQ922H4 420 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 Wrap73Q9JM98 462 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 Gabrg1Q9R0Y8 465 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 Siglec15A7E1W8 342 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 Apoc1P34928 88 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 Pld6Q5SWZ9 221 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 Olfr453Q7TRV7 317 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 Plcxd3Q8BLJ3 321 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 Olfr134Q8VG95 312 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 Rab14Q91V41 215 aaKnown RBP13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 NcmapQ99JS0 100 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 ApooQ9DCZ4 198 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 Pmaip1Q9JM54 103 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 Btbd35f23A0A0R4J2B9 498 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 Gm21818J3KMS6 170 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 Phb2O35129 299 aaKnown RBP13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 Atp4bP50992 294 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 Asphd1Q2TA57 360 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 Ankrd33bQ3U0L2 486 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 DbpQ60925 325 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 Oxgr1Q6IYF8 337 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 MffQ6PCP5 291 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 Vstm2lQ6PDS0 220 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 Prss33Q80WM7 277 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 Rab9bQ8BHH2 201 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 Gm5447Q8BPB2 115 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 Vash2Q8C5G2 355 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 Dmbx1Q91ZK4 381 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 Asb12Q9D738 308 aa13.69□□□□□ -0.22
Trim39-203ENSMUST00000113706 Abca4O35600 2310 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Efna4O08542 206 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 LtbP41155 306 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Kcnn3P58391 732 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Gm6760Q0ZNK3 87 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Gm12258Q5NC63 627 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Skida1Q80YR3 822 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Zfp3Q8BLB0 497 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Vmn1r179Q8R2B4 323 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Rnf113a1Q8R3P8 341 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Pdcd10Q8VE70 212 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Dkk4Q8VEJ3 221 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Olfr1309Q8VF83 320 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Eva1aQ91WM6 156 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Fbxw4Q9JMJ2 410 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Myo7bQ99MZ6 2113 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Birc7A2AWP0 285 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Ifi203O35368 408 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Egr3P43300 387 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Rnft2Q3UF64 445 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Sox19Q62249 55 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Znf436Q8BPP0 452 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Slc38a2Q8CFE6 504 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Olfr361Q8VF16 322 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Olfr1301Q8VGE7 312 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Arrdc1Q99KN1 434 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Mtfp1Q9CRB8 166 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 MrnipQ9D1F5 335 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Tmem9bQ9JJR8 199 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Gnpnat1Q9JK38 184 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Fscn3Q9QXW4 498 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Kcne4Q9WTW3 170 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Gm42543A0A0G2JET4 117 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Atpif1O35143 106 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Zfp27P10077 819 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Supt4h1aP63271 117 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Rnase12Q5GAM8 145 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Tmed3Q78IS1 221 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Alkal2Q80UG6 151 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Olfr1054Q8VGS7 312 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Fgfrl1Q91V87 529 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Snu13Q9D0T1 128 aaKnown RBP13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Q9DAN9 164 aa13.68□□□□□ -0.22
Trim39-203ENSMUST00000113706 Igkv5-37A0A140T8N4 115 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 Olfr623E9Q382 317 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 CcnkO88874 554 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 Mesp1P97309 243 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 Gnb3Q61011 340 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 Glt8d1Q6NSU3 371 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 Olfr1181Q7TR18 311 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 Kctd9Q80UN1 339 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 Actbl2Q8BFZ3 376 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 Tm2d3Q8BJ83 261 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 Ubqln3Q8C5U9 658 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 Mbnl3Q8R003 342 aaKnown RBP13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 Arl6ip5Q8R5J9 188 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 Alg12Q8VDB2 486 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 Ndufa5Q9CPP6 116 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 Tmem178aQ9CZ16 297 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 BambiQ9D0L6 260 aa13.67□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms