RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	TRAT1	Q6PIZ9	186 aa		12.05	□□□□□ -0.48
PHGDH-231	ENST00000641939	TREML4	Q6UXN2	200 aa		12.05	□□□□□ -0.48
PHGDH-231	ENST00000641939	OR10X1	Q8NGY0	326 aa		12.05	□□□□□ -0.48
PHGDH-231	ENST00000641939	UBALD1	Q8TB05	177 aa		12.05	□□□□□ -0.48
PHGDH-231	ENST00000641939	NEDD4L	Q96PU5	975 aa		12.05	□□□□□ -0.48
PHGDH-231	ENST00000641939	GFI1	Q99684	422 aa		12.05	□□□□□ -0.48
PHGDH-231	ENST00000641939	KCNK15	Q9H427	330 aa		12.05	□□□□□ -0.48
PHGDH-231	ENST00000641939	LIN7B	Q9HAP6	207 aa		12.05	□□□□□ -0.48
PHGDH-231	ENST00000641939	PLGRKT	Q9HBL7	147 aa		12.05	□□□□□ -0.48
PHGDH-231	ENST00000641939	RAB9B	Q9NP90	201 aa		12.05	□□□□□ -0.48
PHGDH-231	ENST00000641939	GFOD1	Q9NXC2	390 aa		12.05	□□□□□ -0.48
PHGDH-231	ENST00000641939	AK6	Q9Y3D8	172 aa	Known RBP	12.05	□□□□□ -0.48
PHGDH-231	ENST00000641939		A0A1W2PPE3	182 aa		12.04	□□□□□ -0.48
PHGDH-231	ENST00000641939	TMEM14DP	A8MWL7	114 aa		12.04	□□□□□ -0.48
PHGDH-231	ENST00000641939	C12orf77	C9JDV5	145 aa		12.04	□□□□□ -0.48
PHGDH-231	ENST00000641939	CHAT	P28329	748 aa		12.04	□□□□□ -0.48
PHGDH-231	ENST00000641939	LOXL3	P58215	753 aa		12.04	□□□□□ -0.48
PHGDH-231	ENST00000641939	BLCAP	P62952	87 aa		12.04	□□□□□ -0.48
PHGDH-231	ENST00000641939	QRFP	P83859	136 aa		12.04	□□□□□ -0.48
PHGDH-231	ENST00000641939	HABP2	Q14520	560 aa	Predicted RBP	12.04	□□□□□ -0.48
PHGDH-231	ENST00000641939	HERPUD1	Q15011	391 aa		12.04	□□□□□ -0.48
PHGDH-231	ENST00000641939	TMEM30B	Q3MIR4	351 aa		12.04	□□□□□ -0.48
PHGDH-231	ENST00000641939	NKAPL	Q5M9Q1	402 aa		12.04	□□□□□ -0.48
PHGDH-231	ENST00000641939		Q6ZTK2	550 aa		12.04	□□□□□ -0.48
PHGDH-231	ENST00000641939	SVOP	Q8N4V2	548 aa		12.04	□□□□□ -0.48
PHGDH-231	ENST00000641939	KLHDC1	Q8N7A1	406 aa		12.04	□□□□□ -0.48
PHGDH-231	ENST00000641939	CAPSL	Q8WWF8	208 aa		12.04	□□□□□ -0.48
PHGDH-231	ENST00000641939	AKR1E2	Q96JD6	320 aa		12.04	□□□□□ -0.48
PHGDH-231	ENST00000641939	TM2D1	Q9BX74	207 aa		12.04	□□□□□ -0.48
PHGDH-231	ENST00000641939	NDUFB11	Q9NX14	153 aa		12.04	□□□□□ -0.48
PHGDH-231	ENST00000641939	NOTCH1	P46531	2555 aa		12.03	□□□□□ -0.48
PHGDH-231	ENST00000641939	IGHV3-43	A0A0B4J1X8	118 aa		12.03	□□□□□ -0.48
PHGDH-231	ENST00000641939	OR2F2	O95006	317 aa		12.03	□□□□□ -0.48
PHGDH-231	ENST00000641939	HBZ	P02008	142 aa		12.03	□□□□□ -0.48
PHGDH-231	ENST00000641939	FAM106CP	P0CH98	169 aa		12.03	□□□□□ -0.48
PHGDH-231	ENST00000641939	IGHV3-43D	P0DP04	118 aa		12.03	□□□□□ -0.48
PHGDH-231	ENST00000641939	VSIG10L2	P0DP72	767 aa		12.03	□□□□□ -0.48
PHGDH-231	ENST00000641939	ARSB	P15848	533 aa		12.03	□□□□□ -0.48
PHGDH-231	ENST00000641939	RCC1	P18754	421 aa	Predicted RBP	12.03	□□□□□ -0.48
PHGDH-231	ENST00000641939	RAB7A	P51149	207 aa		12.03	□□□□□ -0.48
PHGDH-231	ENST00000641939	PSMD7	P51665	324 aa		12.03	□□□□□ -0.48
PHGDH-231	ENST00000641939	DIAPH2-AS1	Q14236	149 aa		12.03	□□□□□ -0.48
PHGDH-231	ENST00000641939	P2RY14	Q15391	338 aa		12.03	□□□□□ -0.48
PHGDH-231	ENST00000641939	RAB11B	Q15907	218 aa		12.03	□□□□□ -0.48
PHGDH-231	ENST00000641939		Q3ZCU0	254 aa		12.03	□□□□□ -0.48
PHGDH-231	ENST00000641939	OR8H3	Q8N146	312 aa		12.03	□□□□□ -0.48
PHGDH-231	ENST00000641939	LINC00311	Q8N616	119 aa		12.03	□□□□□ -0.48
PHGDH-231	ENST00000641939	C8orf31	Q8N9H6	132 aa		12.03	□□□□□ -0.48
PHGDH-231	ENST00000641939	MRPL30	Q8TCC3	161 aa	Known RBP	12.03	□□□□□ -0.48
PHGDH-231	ENST00000641939	CYYR1	Q96J86	154 aa		12.03	□□□□□ -0.48
PHGDH-231	ENST00000641939	RBM14	Q96PK6	669 aa	Known RBP	12.03	□□□□□ -0.48
PHGDH-231	ENST00000641939	SULT4A1	Q9BR01	284 aa		12.03	□□□□□ -0.48
PHGDH-231	ENST00000641939	SLC25A33	Q9BSK2	321 aa		12.03	□□□□□ -0.48
PHGDH-231	ENST00000641939	YTHDF1	Q9BYJ9	559 aa	Known RBP	12.03	□□□□□ -0.48
PHGDH-231	ENST00000641939	SERTAD4	Q9NUC0	356 aa		12.03	□□□□□ -0.48
PHGDH-231	ENST00000641939	MBNL3	Q9NUK0	354 aa	Known RBP	12.03	□□□□□ -0.48
PHGDH-231	ENST00000641939	KCNIP1	Q9NZI2	227 aa		12.03	□□□□□ -0.48
PHGDH-231	ENST00000641939		A0A1W2PPI3	338 aa		12.02	□□□□□ -0.49
PHGDH-231	ENST00000641939	FAM90A9P	A6NNJ1	464 aa		12.02	□□□□□ -0.49
PHGDH-231	ENST00000641939	RANBP1	P43487	201 aa		12.02	□□□□□ -0.49
PHGDH-231	ENST00000641939	FBLN7	Q53RD9	439 aa		12.02	□□□□□ -0.49
PHGDH-231	ENST00000641939	ARSJ	Q5FYB0	599 aa	Predicted RBP	12.02	□□□□□ -0.49
PHGDH-231	ENST00000641939	UBE2U	Q5VVX9	321 aa		12.02	□□□□□ -0.49
PHGDH-231	ENST00000641939		Q6ZS46	218 aa		12.02	□□□□□ -0.49
PHGDH-231	ENST00000641939	OR2W3	Q7Z3T1	314 aa		12.02	□□□□□ -0.49
PHGDH-231	ENST00000641939	C6orf201	Q7Z4U5	140 aa		12.02	□□□□□ -0.49
PHGDH-231	ENST00000641939	ZNF554	Q86TJ5	538 aa		12.02	□□□□□ -0.49
PHGDH-231	ENST00000641939	THNSL2	Q86YJ6	484 aa		12.02	□□□□□ -0.49
PHGDH-231	ENST00000641939	SPART	Q8N0X7	666 aa		12.02	□□□□□ -0.49
PHGDH-231	ENST00000641939	PRR18	Q8N4B5	295 aa		12.02	□□□□□ -0.49
PHGDH-231	ENST00000641939	DRAM1	Q8N682	238 aa		12.02	□□□□□ -0.49
PHGDH-231	ENST00000641939	OR56B4	Q8NH76	319 aa		12.02	□□□□□ -0.49
PHGDH-231	ENST00000641939	OR1L1	Q8NH94	360 aa		12.02	□□□□□ -0.49
PHGDH-231	ENST00000641939	OCSTAMP	Q9BR26	566 aa		12.02	□□□□□ -0.49
PHGDH-231	ENST00000641939	NICN1	Q9BSH3	213 aa		12.02	□□□□□ -0.49
PHGDH-231	ENST00000641939	URM1	Q9BTM9	101 aa	Known RBP	12.02	□□□□□ -0.49
PHGDH-231	ENST00000641939	FAAP24	Q9BTP7	215 aa		12.02	□□□□□ -0.49
PHGDH-231	ENST00000641939	TAF9B	Q9HBM6	251 aa		12.02	□□□□□ -0.49
PHGDH-231	ENST00000641939	GNG12	Q9UBI6	72 aa		12.02	□□□□□ -0.49
PHGDH-231	ENST00000641939	RRP15	Q9Y3B9	282 aa	Known RBP	12.02	□□□□□ -0.49
PHGDH-231	ENST00000641939	LRRC42	Q9Y546	428 aa		12.02	□□□□□ -0.49
PHGDH-231	ENST00000641939		V9GY05	133 aa		12.02	□□□□□ -0.49
PHGDH-231	ENST00000641939		A0A0A6YYD4	124 aa		12.01	□□□□□ -0.49
PHGDH-231	ENST00000641939	CCRL2	O00421	344 aa		12.01	□□□□□ -0.49
PHGDH-231	ENST00000641939	HSD17B6	O14756	317 aa		12.01	□□□□□ -0.49
PHGDH-231	ENST00000641939	GAPDH	P04406	335 aa	Known RBP	12.01	□□□□□ -0.49
PHGDH-231	ENST00000641939	SNRNP70	P08621	437 aa	Known RBP	12.01	□□□□□ -0.49
PHGDH-231	ENST00000641939	BLVRB	P30043	206 aa	Predicted RBP	12.01	□□□□□ -0.49
PHGDH-231	ENST00000641939	VDAC2	P45880	294 aa	Predicted RBP	12.01	□□□□□ -0.49
PHGDH-231	ENST00000641939	ZNF816	Q0VGE8	651 aa	Predicted RBP	12.01	□□□□□ -0.49
PHGDH-231	ENST00000641939	C2orf68	Q2NKX9	166 aa		12.01	□□□□□ -0.49
PHGDH-231	ENST00000641939	FAM53A	Q6NSI3	398 aa	Predicted RBP	12.01	□□□□□ -0.49
PHGDH-231	ENST00000641939	CD200R1L	Q6Q8B3	271 aa		12.01	□□□□□ -0.49
PHGDH-231	ENST00000641939	C11orf44	Q8N8P7	122 aa		12.01	□□□□□ -0.49
PHGDH-231	ENST00000641939	CFHR4	Q92496	578 aa		12.01	□□□□□ -0.49
PHGDH-231	ENST00000641939	LPAR5	Q9H1C0	372 aa		12.01	□□□□□ -0.49
PHGDH-231	ENST00000641939	PLEKHJ1	Q9NW61	149 aa		12.01	□□□□□ -0.49
PHGDH-231	ENST00000641939	TRAV1-2	A0A0B4J238	106 aa		12	□□□□□ -0.49
PHGDH-231	ENST00000641939	TRDV1	A0A1B0GX56	115 aa		12	□□□□□ -0.49
PHGDH-231	ENST00000641939	PDCD5	O14737	125 aa		12	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms