RNA–Protein interactions for RNA: ENST00000637699.1

CLN3-262, Transcript of CLN3, battenin, humanhuman

TSL 2

Gene CLN3, Length 1,228 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-262ENST00000637699 OR5AK2Q8NH90 309 aa15.1■□□□□ 0.01
CLN3-262ENST00000637699 RHOXF1Q8NHV9 184 aa15.1■□□□□ 0.01
CLN3-262ENST00000637699 ALG8Q9BVK2 526 aa15.1■□□□□ 0.01
CLN3-262ENST00000637699 KLK15Q9H2R5 256 aa15.1■□□□□ 0.01
CLN3-262ENST00000637699 PALMDQ9NP74 551 aa15.1■□□□□ 0.01
CLN3-262ENST00000637699 GFOD1Q9NXC2 390 aa15.1■□□□□ 0.01
CLN3-262ENST00000637699 LOC100130705A0A1B0GUX0 176 aa15.09■□□□□ 0.01
CLN3-262ENST00000637699 E9PI62 339 aa15.09■□□□□ 0.01
CLN3-262ENST00000637699 SLC31A2O15432 143 aa15.09■□□□□ 0.01
CLN3-262ENST00000637699 BAG2O95816 211 aa15.09■□□□□ 0.01
CLN3-262ENST00000637699 IGF1P05019 195 aa15.09■□□□□ 0.01
CLN3-262ENST00000637699 OR8U8P0C7N1 319 aa15.09■□□□□ 0.01
CLN3-262ENST00000637699 SLC2A2P11168 524 aaPredicted RBP15.09■□□□□ 0.01
CLN3-262ENST00000637699 TMEM65Q6PI78 240 aa15.09■□□□□ 0.01
CLN3-262ENST00000637699 C8orf31Q8N9H6 132 aa15.09■□□□□ 0.01
CLN3-262ENST00000637699 MRPL48Q96GC5 212 aaKnown RBP15.09■□□□□ 0.01
CLN3-262ENST00000637699 UBE2E2Q96LR5 201 aa15.09■□□□□ 0.01
CLN3-262ENST00000637699 AMBNQ9NP70 447 aa15.09■□□□□ 0.01
CLN3-262ENST00000637699 ZNF107Q9UII5 783 aaPredicted RBP15.09■□□□□ 0.01
CLN3-262ENST00000637699 ING4Q9UNL4 249 aa15.09■□□□□ 0.01
CLN3-262ENST00000637699 WSB1Q9Y6I7 421 aa15.09■□□□□ 0.01
CLN3-262ENST00000637699 TMEM212A6NML5 194 aa15.08■□□□□ 0
CLN3-262ENST00000637699 I3L521 148 aa15.08■□□□□ 0
CLN3-262ENST00000637699 GEMIN2O14893 280 aaKnown RBP15.08■□□□□ 0
CLN3-262ENST00000637699 OR5H8P0DN80 308 aa15.08■□□□□ 0
CLN3-262ENST00000637699 MYF6P23409 242 aa15.08■□□□□ 0
CLN3-262ENST00000637699 SOX2P48431 317 aa15.08■□□□□ 0
CLN3-262ENST00000637699 GNB1P62873 340 aa15.08■□□□□ 0
CLN3-262ENST00000637699 ZNF616Q08AN1 781 aa15.08■□□□□ 0
CLN3-262ENST00000637699 KIAA0141Q14154 515 aaPredicted RBP15.08■□□□□ 0
CLN3-262ENST00000637699 GALEQ14376 348 aa15.08■□□□□ 0
CLN3-262ENST00000637699 ATAD3CQ5T2N8 411 aa15.08■□□□□ 0
CLN3-262ENST00000637699 ASCL4Q6XD76 172 aa15.08■□□□□ 0
CLN3-262ENST00000637699 ZNF491Q8N8L2 437 aa15.08■□□□□ 0
CLN3-262ENST00000637699 OR52N1Q8NH53 320 aa15.08■□□□□ 0
CLN3-262ENST00000637699 MYOZ3Q8TDC0 251 aa15.08■□□□□ 0
CLN3-262ENST00000637699 NEK7Q8TDX7 302 aa15.08■□□□□ 0
CLN3-262ENST00000637699 TAS2R4Q9NYW5 299 aa15.08■□□□□ 0
CLN3-262ENST00000637699 SNTNA6NMZ2 147 aa15.07■□□□□ 0
CLN3-262ENST00000637699 G3V318 75 aa15.07■□□□□ 0
CLN3-262ENST00000637699 ORC5O43913 435 aa15.07■□□□□ 0
CLN3-262ENST00000637699 RPSAP08865 295 aaKnown RBP15.07■□□□□ 0
CLN3-262ENST00000637699 FRMD6-AS1P0C7T7 363 aa15.07■□□□□ 0
CLN3-262ENST00000637699 RBM11P57052 281 aaKnown RBP15.07■□□□□ 0
CLN3-262ENST00000637699 ZNF529Q6P280 563 aa15.07■□□□□ 0
CLN3-262ENST00000637699 ZNF429Q86V71 674 aa15.07■□□□□ 0
CLN3-262ENST00000637699 DCUN1D4Q92564 292 aa15.07■□□□□ 0
CLN3-262ENST00000637699 IFT22Q9H7X7 185 aa15.07■□□□□ 0
CLN3-262ENST00000637699 ISYNA1Q9NPH2 558 aa15.07■□□□□ 0
CLN3-262ENST00000637699 VSIG4Q9Y279 399 aa15.07■□□□□ 0
CLN3-262ENST00000637699 LCE6AA0A183 80 aa15.06■□□□□ 0
CLN3-262ENST00000637699 TXNL1O43396 289 aa15.06■□□□□ 0
CLN3-262ENST00000637699 SAP30O75446 220 aa15.06■□□□□ 0
CLN3-262ENST00000637699 MT-ND4P03905 459 aa15.06■□□□□ 0
CLN3-262ENST00000637699 CSTBP04080 98 aaKnown RBP15.06■□□□□ 0
CLN3-262ENST00000637699 SPNP16150 400 aa15.06■□□□□ 0
CLN3-262ENST00000637699 PPIFP30405 207 aaKnown RBP15.06■□□□□ 0
CLN3-262ENST00000637699 VHLP40337 213 aa15.06■□□□□ 0
CLN3-262ENST00000637699 ZFAND6Q6FIF0 208 aa15.06■□□□□ 0
CLN3-262ENST00000637699 SLC25A48Q6ZT89 311 aaKnown RBP15.06■□□□□ 0
CLN3-262ENST00000637699 SYS1Q8N2H4 156 aa15.06■□□□□ 0
CLN3-262ENST00000637699 OR10V1Q8NGI7 309 aa15.06■□□□□ 0
CLN3-262ENST00000637699 APH1BQ8WW43 257 aa15.06■□□□□ 0
CLN3-262ENST00000637699 Q96MT0 163 aa15.06■□□□□ 0
CLN3-262ENST00000637699 METTL9Q9H1A3 318 aa15.06■□□□□ 0
CLN3-262ENST00000637699 ZMAT4Q9H898 229 aa15.06■□□□□ 0
CLN3-262ENST00000637699 ZNF580Q9UK33 172 aa15.06■□□□□ 0
CLN3-262ENST00000637699 AIPO00170 330 aa15.05■□□□□ -0
CLN3-262ENST00000637699 OVOL1O14753 267 aa15.05■□□□□ -0
CLN3-262ENST00000637699 SERPINA2P20848 420 aa15.05■□□□□ -0
CLN3-262ENST00000637699 ZNF134P52741 427 aa15.05■□□□□ -0
CLN3-262ENST00000637699 RUNX1Q01196 453 aa15.05■□□□□ -0
CLN3-262ENST00000637699 MMDQ15546 238 aa15.05■□□□□ -0
CLN3-262ENST00000637699 CT45A1Q5HYN5 189 aa15.05■□□□□ -0
CLN3-262ENST00000637699 NHLRC3Q5JS37 347 aa15.05■□□□□ -0
CLN3-262ENST00000637699 ZNF497Q6ZNH5 498 aa15.05■□□□□ -0
CLN3-262ENST00000637699 ZNF439Q8NDP4 499 aa15.05■□□□□ -0
CLN3-262ENST00000637699 CT45A3Q8NHU0 189 aa15.05■□□□□ -0
CLN3-262ENST00000637699 MYCBPQ99417 103 aaPredicted RBP15.05■□□□□ -0
CLN3-262ENST00000637699 CHCHD6Q9BRQ6 235 aa15.05■□□□□ -0
CLN3-262ENST00000637699 GNG12Q9UBI6 72 aa15.05■□□□□ -0
CLN3-262ENST00000637699 LYSTQ99698 3801 aa15.04■□□□□ -0
CLN3-262ENST00000637699 C12orf77C9JDV5 145 aa15.04■□□□□ -0
CLN3-262ENST00000637699 ATP6V0E1O15342 81 aa15.04■□□□□ -0
CLN3-262ENST00000637699 ZNF137PP52743 207 aa15.04■□□□□ -0
CLN3-262ENST00000637699 GBX2P52951 348 aaPredicted RBP15.04■□□□□ -0
CLN3-262ENST00000637699 GABPB1Q06547 395 aaPredicted RBP15.04■□□□□ -0
CLN3-262ENST00000637699 SMN1Q16637 294 aaKnown RBP15.04■□□□□ -0
CLN3-262ENST00000637699 Q3ZCU0 254 aa15.04■□□□□ -0
CLN3-262ENST00000637699 PRR18Q8N4B5 295 aa15.04■□□□□ -0
CLN3-262ENST00000637699 OR52I1Q8NGK6 324 aa15.04■□□□□ -0
CLN3-262ENST00000637699 S100A13Q99584 98 aa15.04■□□□□ -0
CLN3-262ENST00000637699 JAM3Q9BX67 310 aa15.04■□□□□ -0
CLN3-262ENST00000637699 ALX4Q9H161 411 aaPredicted RBP15.04■□□□□ -0
CLN3-262ENST00000637699 PARP11Q9NR21 331 aa15.04■□□□□ -0
CLN3-262ENST00000637699 MRPS18AQ9NVS2 196 aaKnown RBP15.04■□□□□ -0
CLN3-262ENST00000637699 ERVK13-1Q9NX77 482 aa15.04■□□□□ -0
CLN3-262ENST00000637699 SMPD3Q9NY59 655 aaPredicted RBP15.04■□□□□ -0
CLN3-262ENST00000637699 IL36GQ9NZH8 169 aa15.04■□□□□ -0
CLN3-262ENST00000637699 A0A1W2PP11 408 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms