RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 PRRX1P54821 245 aa6.64□□□□□ -1.35
NEK3-209ENST00000618856 RAG2P55895 527 aa6.64□□□□□ -1.35
NEK3-209ENST00000618856 CLDN12P56749 244 aa6.64□□□□□ -1.35
NEK3-209ENST00000618856 PLA2G7Q13093 441 aa6.64□□□□□ -1.35
NEK3-209ENST00000618856 HABP2Q14520 560 aaPredicted RBP6.64□□□□□ -1.35
NEK3-209ENST00000618856 SSX2Q16385 188 aa6.64□□□□□ -1.35
NEK3-209ENST00000618856 PLAC9Q5JTB6 97 aa6.64□□□□□ -1.35
NEK3-209ENST00000618856 STEAP3Q658P3 488 aa6.64□□□□□ -1.35
NEK3-209ENST00000618856 CCBE1Q6UXH8 406 aaPredicted RBP6.64□□□□□ -1.35
NEK3-209ENST00000618856 C12orf54Q6X4T0 127 aa6.64□□□□□ -1.35
NEK3-209ENST00000618856 Q6ZSV7 163 aa6.64□□□□□ -1.35
NEK3-209ENST00000618856 C6orf201Q7Z4U5 140 aa6.64□□□□□ -1.35
NEK3-209ENST00000618856 TSPAN14Q8NG11 270 aa6.64□□□□□ -1.35
NEK3-209ENST00000618856 OR4F5Q8NH21 305 aa6.64□□□□□ -1.35
NEK3-209ENST00000618856 TAF15Q92804 592 aaKnown RBP eCLIP6.64□□□□□ -1.35
NEK3-209ENST00000618856 ST6GALNAC6Q969X2 333 aa6.64□□□□□ -1.35
NEK3-209ENST00000618856 YIPF6Q96EC8 236 aa6.64□□□□□ -1.35
NEK3-209ENST00000618856 URM1Q9BTM9 101 aaKnown RBP6.64□□□□□ -1.35
NEK3-209ENST00000618856 FAAP24Q9BTP7 215 aa6.64□□□□□ -1.35
NEK3-209ENST00000618856 MMP28Q9H239 520 aa6.64□□□□□ -1.35
NEK3-209ENST00000618856 PLGRKTQ9HBL7 147 aa6.64□□□□□ -1.35
NEK3-209ENST00000618856 GFOD1Q9NXC2 390 aa6.64□□□□□ -1.35
NEK3-209ENST00000618856 ING3Q9NXR8 418 aa6.64□□□□□ -1.35
NEK3-209ENST00000618856 RAB22AQ9UL26 194 aa6.64□□□□□ -1.35
NEK3-209ENST00000618856 PSG11Q9UQ72 335 aa6.64□□□□□ -1.35
NEK3-209ENST00000618856 TCF19Q9Y242 345 aa6.64□□□□□ -1.35
NEK3-209ENST00000618856 UBE2QL1A1L167 161 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 CLPSL1A2RUU4 121 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 NOTOA8MTQ0 251 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 RAB27BO00194 218 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 TMEM127O75204 238 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 CD36P16671 472 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 RCC1P18754 421 aaPredicted RBP6.63□□□□□ -1.35
NEK3-209ENST00000618856 MDKP21741 143 aaPredicted RBP6.63□□□□□ -1.35
NEK3-209ENST00000618856 GADD45AP24522 165 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 MYL9P24844 172 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 BLVRBP30043 206 aaPredicted RBP6.63□□□□□ -1.35
NEK3-209ENST00000618856 KIR2DS4P43632 304 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 ZNF134P52741 427 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 EFNB2P52799 333 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 PROK1P58294 105 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 HTD2P86397 168 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 DYNC1I2Q13409 638 aaKnown RBP6.63□□□□□ -1.35
NEK3-209ENST00000618856 HMGN3Q15651 99 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 NEDD8Q15843 81 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 C6orf183Q5T699 404 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 TPTE2P1Q5T6R2 138 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 HES5Q5TA89 166 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 FAM53AQ6NSI3 398 aaPredicted RBP6.63□□□□□ -1.35
NEK3-209ENST00000618856 NBEAL1Q6ZS30 2694 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 SLC25A48Q6ZT89 311 aaKnown RBP6.63□□□□□ -1.35
NEK3-209ENST00000618856 Q8N2B8 174 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 OR4K15Q8NH41 348 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 LINC01006Q8NI28 216 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 RFESDQ8TAC1 157 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 CCDC107Q8WV48 283 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 CFHR4Q92496 578 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 ARL11Q969Q4 196 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 KCTD7Q96MP8 289 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 NEDD4LQ96PU5 975 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 OCSTAMPQ9BR26 566 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 RIMS4Q9H426 269 aaPredicted RBP6.63□□□□□ -1.35
NEK3-209ENST00000618856 RANBP3Q9H6Z4 567 aaPredicted RBP6.63□□□□□ -1.35
NEK3-209ENST00000618856 LIN7BQ9HAP6 207 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 RAB18Q9NP72 206 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 RAB9BQ9NP90 201 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 TNFRSF19Q9NS68 423 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 SSR3Q9UNL2 185 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 KCNK7Q9Y2U2 307 aa6.63□□□□□ -1.35
NEK3-209ENST00000618856 A0A1W2PPI3 338 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 FAM172BPA6NC97 362 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 BTBD17A6NE02 478 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 TOR1AO14656 332 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 HBZP02008 142 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 SMIM18P0DKX4 95 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 NFYBP25208 207 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 SDC2P34741 201 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 CEACAM3P40198 252 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 RAB13P51153 203 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 SCAND1P57086 179 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 ZNF816Q0VGE8 651 aaPredicted RBP6.62□□□□□ -1.35
NEK3-209ENST00000618856 EBI3Q14213 229 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 FAM189A2Q15884 450 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 MOGAT2Q3SYC2 334 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 FBLN7Q53RD9 439 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 CT45A1Q5HYN5 189 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 NKAPLQ5M9Q1 402 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 OLFML2AQ68BL7 652 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 THNSL2Q86YJ6 484 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 OR56B1Q8NGI3 324 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 OR1L1Q8NH94 360 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 CT45A3Q8NHU0 189 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 WIPF2Q8TF74 440 aaPredicted RBP6.62□□□□□ -1.35
NEK3-209ENST00000618856 WFDC12Q8WWY7 111 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 LEAP2Q969E1 77 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 ARHGAP5-AS1Q96IT6 56 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 CENPOQ9BU64 300 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 PECRQ9BY49 303 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 RNF167Q9H6Y7 350 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 BEX1Q9HBH7 125 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms