RNA–Protein interactions for RNA: ENST00000617451.4

PTPRF-216, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5 BASIC

Gene PTPRF, Length 1,129 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-216ENST00000617451 RPL36Q9Y3U8 105 aaKnown RBP19.51■□□□□ 0.71
PTPRF-216ENST00000617451 IGHG4P01861 327 aa19.5■□□□□ 0.71
PTPRF-216ENST00000617451 SERPINA2P20848 420 aa19.5■□□□□ 0.71
PTPRF-216ENST00000617451 PPP3R1P63098 170 aa19.5■□□□□ 0.71
PTPRF-216ENST00000617451 NKAPLQ5M9Q1 402 aa19.5■□□□□ 0.71
PTPRF-216ENST00000617451 ATAD3CQ5T2N8 411 aa19.5■□□□□ 0.71
PTPRF-216ENST00000617451 FAM71E2Q8N5Q1 922 aa19.5■□□□□ 0.71
PTPRF-216ENST00000617451 HSPB9Q9BQS6 159 aa19.5■□□□□ 0.71
PTPRF-216ENST00000617451 SCOCQ9UIL1 159 aa19.5■□□□□ 0.71
PTPRF-216ENST00000617451 DYNC1I1O14576 645 aa19.49■□□□□ 0.71
PTPRF-216ENST00000617451 SLC31A2O15432 143 aa19.49■□□□□ 0.71
PTPRF-216ENST00000617451 ZNF780AO75290 641 aaPredicted RBP19.49■□□□□ 0.71
PTPRF-216ENST00000617451 ZNF137PP52743 207 aa19.49■□□□□ 0.71
PTPRF-216ENST00000617451 F2RL1P55085 397 aa19.49■□□□□ 0.71
PTPRF-216ENST00000617451 SLC25A48Q6ZT89 311 aaKnown RBP19.49■□□□□ 0.71
PTPRF-216ENST00000617451 S100A13Q99584 98 aa19.49■□□□□ 0.71
PTPRF-216ENST00000617451 SIRT4Q9Y6E7 314 aaPredicted RBP19.49■□□□□ 0.71
PTPRF-216ENST00000617451 HUWE1Q7Z6Z7 4374 aaKnown RBP19.49■□□□□ 0.71
PTPRF-216ENST00000617451 DNAH7Q8WXX0 4024 aa19.48■□□□□ 0.71
PTPRF-216ENST00000617451 SEC14L6B5MCN3 397 aa19.48■□□□□ 0.71
PTPRF-216ENST00000617451 AIPO00170 330 aa19.48■□□□□ 0.71
PTPRF-216ENST00000617451 BDKRB2P30411 391 aa19.48■□□□□ 0.71
PTPRF-216ENST00000617451 SOX6P35712 828 aa19.48■□□□□ 0.71
PTPRF-216ENST00000617451 VHLP40337 213 aa19.48■□□□□ 0.71
PTPRF-216ENST00000617451 ECI1P42126 302 aa19.48■□□□□ 0.71
PTPRF-216ENST00000617451 FHL3Q13643 280 aa19.48■□□□□ 0.71
PTPRF-216ENST00000617451 ZFP1Q6P2D0 407 aa19.48■□□□□ 0.71
PTPRF-216ENST00000617451 ZNF439Q8NDP4 499 aa19.48■□□□□ 0.71
PTPRF-216ENST00000617451 NEK7Q8TDX7 302 aa19.48■□□□□ 0.71
PTPRF-216ENST00000617451 C4orf3Q8WVX3 66 aa19.48■□□□□ 0.71
PTPRF-216ENST00000617451 APH1BQ8WW43 257 aa19.48■□□□□ 0.71
PTPRF-216ENST00000617451 RBMXL1Q96E39 390 aaKnown RBP19.48■□□□□ 0.71
PTPRF-216ENST00000617451 FGF20Q9NP95 211 aaPredicted RBP19.48■□□□□ 0.71
PTPRF-216ENST00000617451 ZNF580Q9UK33 172 aa19.48■□□□□ 0.71
PTPRF-216ENST00000617451 LOC100130705A0A1B0GUX0 176 aa19.47■□□□□ 0.71
PTPRF-216ENST00000617451 A0A1W2PP11 408 aa19.47■□□□□ 0.71
PTPRF-216ENST00000617451 TXNL1O43396 289 aa19.47■□□□□ 0.71
PTPRF-216ENST00000617451 IGF1P05019 195 aa19.47■□□□□ 0.71
PTPRF-216ENST00000617451 GTF2F2P13984 249 aa19.47■□□□□ 0.71
PTPRF-216ENST00000617451 VDAC1P21796 283 aa19.47■□□□□ 0.71
PTPRF-216ENST00000617451 PSMB8P28062 276 aa19.47■□□□□ 0.71
PTPRF-216ENST00000617451 ZNF134P52741 427 aa19.47■□□□□ 0.71
PTPRF-216ENST00000617451 SLC22A6Q4U2R8 563 aa19.47■□□□□ 0.71
PTPRF-216ENST00000617451 STX19Q8N4C7 294 aa19.47■□□□□ 0.71
PTPRF-216ENST00000617451 C12orf77C9JDV5 145 aa19.46■□□□□ 0.71
PTPRF-216ENST00000617451 CT45A1Q5HYN5 189 aa19.46■□□□□ 0.71
PTPRF-216ENST00000617451 CT45A3Q8NHU0 189 aa19.46■□□□□ 0.71
PTPRF-216ENST00000617451 ORAI1Q96D31 301 aa19.46■□□□□ 0.71
PTPRF-216ENST00000617451 KCTD7Q96MP8 289 aa19.46■□□□□ 0.71
PTPRF-216ENST00000617451 SLC29A1Q99808 456 aa19.46■□□□□ 0.71
PTPRF-216ENST00000617451 RCC2Q9P258 522 aaKnown RBP19.46■□□□□ 0.71
PTPRF-216ENST00000617451 SPINT2O43291 252 aa19.45■□□□□ 0.7
PTPRF-216ENST00000617451 IGFBP3P17936 291 aaPredicted RBP19.45■□□□□ 0.7
PTPRF-216ENST00000617451 ETV1P50549 477 aa19.45■□□□□ 0.7
PTPRF-216ENST00000617451 RIPK1Q13546 671 aa19.45■□□□□ 0.7
PTPRF-216ENST00000617451 TMEM30BQ3MIR4 351 aa19.45■□□□□ 0.7
PTPRF-216ENST00000617451 SYT6Q5T7P8 510 aaPredicted RBP19.45■□□□□ 0.7
PTPRF-216ENST00000617451 MYOZ3Q8TDC0 251 aa19.45■□□□□ 0.7
PTPRF-216ENST00000617451 ZNF184Q99676 751 aaPredicted RBP19.45■□□□□ 0.7
PTPRF-216ENST00000617451 C9orf16Q9BUW7 83 aa19.45■□□□□ 0.7
PTPRF-216ENST00000617451 SPACA1Q9HBV2 294 aa19.45■□□□□ 0.7
PTPRF-216ENST00000617451 RAB9BQ9NP90 201 aa19.45■□□□□ 0.7
PTPRF-216ENST00000617451 GNG12Q9UBI6 72 aa19.45■□□□□ 0.7
PTPRF-216ENST00000617451 OGG1O15527 345 aa19.44■□□□□ 0.7
PTPRF-216ENST00000617451 OR5H8P0DN80 308 aa19.44■□□□□ 0.7
PTPRF-216ENST00000617451 GPR176Q14439 515 aa19.44■□□□□ 0.7
PTPRF-216ENST00000617451 SMN1Q16637 294 aaKnown RBP19.44■□□□□ 0.7
PTPRF-216ENST00000617451 OR2G6Q5TZ20 316 aa19.44■□□□□ 0.7
PTPRF-216ENST00000617451 TMPRSS11AQ6ZMR5 421 aa19.44■□□□□ 0.7
PTPRF-216ENST00000617451 GAPTQ8N292 157 aa19.44■□□□□ 0.7
PTPRF-216ENST00000617451 OR11H1Q8NG94 326 aa19.44■□□□□ 0.7
PTPRF-216ENST00000617451 SMIM19Q96E16 107 aa19.44■□□□□ 0.7
PTPRF-216ENST00000617451 TRAPPC2LQ9UL33 140 aa19.44■□□□□ 0.7
PTPRF-216ENST00000617451 MCRIP1C9JLW8 97 aa19.43■□□□□ 0.7
PTPRF-216ENST00000617451 GPX5O75715 221 aa19.43■□□□□ 0.7
PTPRF-216ENST00000617451 HBZP02008 142 aa19.43■□□□□ 0.7
PTPRF-216ENST00000617451 DCKP27707 260 aa19.43■□□□□ 0.7
PTPRF-216ENST00000617451 ZNF260Q3ZCT1 412 aa19.43■□□□□ 0.7
PTPRF-216ENST00000617451 STEAP3Q658P3 488 aa19.43■□□□□ 0.7
PTPRF-216ENST00000617451 OR10V1Q8NGI7 309 aa19.43■□□□□ 0.7
PTPRF-216ENST00000617451 OR13C5Q8NGS8 318 aa19.43■□□□□ 0.7
PTPRF-216ENST00000617451 OR4K15Q8NH41 348 aa19.43■□□□□ 0.7
PTPRF-216ENST00000617451 ASCL2Q99929 193 aa19.43■□□□□ 0.7
PTPRF-216ENST00000617451 CHCHD6Q9BRQ6 235 aa19.43■□□□□ 0.7
PTPRF-216ENST00000617451 BABAM2Q9NXR7 383 aa19.43■□□□□ 0.7
PTPRF-216ENST00000617451 ZNF107Q9UII5 783 aaPredicted RBP19.43■□□□□ 0.7
PTPRF-216ENST00000617451 ZNF256Q9Y2P7 627 aaPredicted RBP19.43■□□□□ 0.7
PTPRF-216ENST00000617451 MAGEA13PA6NCF6 341 aa19.42■□□□□ 0.7
PTPRF-216ENST00000617451 LANCL1O43813 399 aa19.42■□□□□ 0.7
PTPRF-216ENST00000617451 WBP4O75554 376 aaKnown RBP19.42■□□□□ 0.7
PTPRF-216ENST00000617451 KIAA0141Q14154 515 aaPredicted RBP19.42■□□□□ 0.7
PTPRF-216ENST00000617451 C6orf183Q5T699 404 aa19.42■□□□□ 0.7
PTPRF-216ENST00000617451 OR1L1Q8NH94 360 aa19.42■□□□□ 0.7
PTPRF-216ENST00000617451 GHSRQ92847 366 aa19.42■□□□□ 0.7
PTPRF-216ENST00000617451 MRPS24Q96EL2 167 aaKnown RBP19.42■□□□□ 0.7
PTPRF-216ENST00000617451 ETAA1Q9NY74 926 aa19.42■□□□□ 0.7
PTPRF-216ENST00000617451 DYNC2H1Q8NCM8 4307 aaKnown RBP19.41■□□□□ 0.7
PTPRF-216ENST00000617451 TRBV5-5A0A0J9YX44 114 aa19.41■□□□□ 0.7
PTPRF-216ENST00000617451 SLC2A2P11168 524 aaPredicted RBP19.41■□□□□ 0.7
PTPRF-216ENST00000617451 PPIFP30405 207 aaKnown RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms