RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 IL3RAP26951 378 aa16.3■□□□□ 0.2
TRAPPC3-208ENST00000616074 CD1BP29016 333 aa16.3■□□□□ 0.2
TRAPPC3-208ENST00000616074 RIPK1Q13546 671 aa16.3■□□□□ 0.2
TRAPPC3-208ENST00000616074 TFAP2CQ92754 450 aa16.3■□□□□ 0.2
TRAPPC3-208ENST00000616074 WWC2-AS2Q96NR7 200 aa16.3■□□□□ 0.2
TRAPPC3-208ENST00000616074 S1PR3Q99500 378 aa16.3■□□□□ 0.2
TRAPPC3-208ENST00000616074 OGG1O15527 345 aa16.29■□□□□ 0.2
TRAPPC3-208ENST00000616074 MOSP00540 346 aa16.29■□□□□ 0.2
TRAPPC3-208ENST00000616074 GTF2F2P13984 249 aa16.29■□□□□ 0.2
TRAPPC3-208ENST00000616074 DCKP27707 260 aa16.29■□□□□ 0.2
TRAPPC3-208ENST00000616074 LUMP51884 338 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC3-208ENST00000616074 DCTN2Q13561 401 aaKnown RBP16.29■□□□□ 0.2
TRAPPC3-208ENST00000616074 GPR50Q13585 617 aa16.29■□□□□ 0.2
TRAPPC3-208ENST00000616074 CXorf66Q5JRM2 361 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC3-208ENST00000616074 TMPRSS11AQ6ZMR5 421 aa16.29■□□□□ 0.2
TRAPPC3-208ENST00000616074 ZNF439Q8NDP4 499 aa16.29■□□□□ 0.2
TRAPPC3-208ENST00000616074 OR8U1Q8NH10 309 aa16.29■□□□□ 0.2
TRAPPC3-208ENST00000616074 HSPB9Q9BQS6 159 aa16.29■□□□□ 0.2
TRAPPC3-208ENST00000616074 GON7Q9BXV9 100 aa16.29■□□□□ 0.2
TRAPPC3-208ENST00000616074 S100A14Q9HCY8 104 aa16.29■□□□□ 0.2
TRAPPC3-208ENST00000616074 TRBV5-5A0A0J9YX44 114 aa16.28■□□□□ 0.2
TRAPPC3-208ENST00000616074 C12orf77C9JDV5 145 aa16.28■□□□□ 0.2
TRAPPC3-208ENST00000616074 ZNF134P52741 427 aa16.28■□□□□ 0.2
TRAPPC3-208ENST00000616074 FOXE3Q13461 319 aa16.28■□□□□ 0.2
TRAPPC3-208ENST00000616074 Q3ZCU0 254 aa16.28■□□□□ 0.2
TRAPPC3-208ENST00000616074 SLC25A48Q6ZT89 311 aaKnown RBP16.28■□□□□ 0.2
TRAPPC3-208ENST00000616074 FAM71E2Q8N5Q1 922 aa16.28■□□□□ 0.2
TRAPPC3-208ENST00000616074 RNF152Q8N8N0 203 aa16.28■□□□□ 0.2
TRAPPC3-208ENST00000616074 RASL11BQ9BPW5 248 aa16.28■□□□□ 0.2
TRAPPC3-208ENST00000616074 BABAM2Q9NXR7 383 aa16.28■□□□□ 0.2
TRAPPC3-208ENST00000616074 RCC2Q9P258 522 aaKnown RBP16.28■□□□□ 0.2
TRAPPC3-208ENST00000616074 ZMAT5Q9UDW3 170 aaKnown RBP16.28■□□□□ 0.2
TRAPPC3-208ENST00000616074 TRAV8-7A0A075B6U6 113 aa16.27■□□□□ 0.2
TRAPPC3-208ENST00000616074 RRP9O43818 475 aaKnown RBP16.27■□□□□ 0.2
TRAPPC3-208ENST00000616074 ELANEP08246 267 aa16.27■□□□□ 0.2
TRAPPC3-208ENST00000616074 CDX1P47902 265 aaPredicted RBP16.27■□□□□ 0.2
TRAPPC3-208ENST00000616074 ZNF137PP52743 207 aa16.27■□□□□ 0.2
TRAPPC3-208ENST00000616074 F2RL1P55085 397 aa16.27■□□□□ 0.2
TRAPPC3-208ENST00000616074 GP2P55259 537 aaKnown RBP16.27■□□□□ 0.2
TRAPPC3-208ENST00000616074 CFHR3Q02985 330 aa16.27■□□□□ 0.2
TRAPPC3-208ENST00000616074 KIR2DS1Q14954 304 aa16.27■□□□□ 0.2
TRAPPC3-208ENST00000616074 SYT6Q5T7P8 510 aaPredicted RBP16.27■□□□□ 0.2
TRAPPC3-208ENST00000616074 PQLC1Q8N2U9 271 aa16.27■□□□□ 0.2
TRAPPC3-208ENST00000616074 STX19Q8N4C7 294 aa16.27■□□□□ 0.2
TRAPPC3-208ENST00000616074 OR10V1Q8NGI7 309 aa16.27■□□□□ 0.2
TRAPPC3-208ENST00000616074 OR4K15Q8NH41 348 aa16.27■□□□□ 0.2
TRAPPC3-208ENST00000616074 GHSRQ92847 366 aa16.27■□□□□ 0.2
TRAPPC3-208ENST00000616074 CLEC2DQ9UHP7 191 aa16.27■□□□□ 0.2
TRAPPC3-208ENST00000616074 TRAPPC2LQ9UL33 140 aa16.27■□□□□ 0.2
TRAPPC3-208ENST00000616074 TXNL1O43396 289 aa16.26■□□□□ 0.19
TRAPPC3-208ENST00000616074 RAMP3O60896 148 aa16.26■□□□□ 0.19
TRAPPC3-208ENST00000616074 GPX5O75715 221 aa16.26■□□□□ 0.19
TRAPPC3-208ENST00000616074 VHLP40337 213 aa16.26■□□□□ 0.19
TRAPPC3-208ENST00000616074 RPS11P62280 158 aaKnown RBP eCLIP16.26■□□□□ 0.19
TRAPPC3-208ENST00000616074 GPR176Q14439 515 aa16.26■□□□□ 0.19
TRAPPC3-208ENST00000616074 Q499Y3 187 aa16.26■□□□□ 0.19
TRAPPC3-208ENST00000616074 CT45A1Q5HYN5 189 aa16.26■□□□□ 0.19
TRAPPC3-208ENST00000616074 DMKNQ6E0U4 476 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC3-208ENST00000616074 C10orf67Q8IYJ2 551 aa16.26■□□□□ 0.19
TRAPPC3-208ENST00000616074 PRR18Q8N4B5 295 aa16.26■□□□□ 0.19
TRAPPC3-208ENST00000616074 ZFP41Q8N8Y5 198 aa16.26■□□□□ 0.19
TRAPPC3-208ENST00000616074 ZNF555Q8NEP9 628 aa16.26■□□□□ 0.19
TRAPPC3-208ENST00000616074 OR8H1Q8NGG4 311 aa16.26■□□□□ 0.19
TRAPPC3-208ENST00000616074 OR5M8Q8NGP6 311 aa16.26■□□□□ 0.19
TRAPPC3-208ENST00000616074 OR1L1Q8NH94 360 aa16.26■□□□□ 0.19
TRAPPC3-208ENST00000616074 CT45A3Q8NHU0 189 aa16.26■□□□□ 0.19
TRAPPC3-208ENST00000616074 MUL1Q969V5 352 aa16.26■□□□□ 0.19
TRAPPC3-208ENST00000616074 SPACA1Q9HBV2 294 aa16.26■□□□□ 0.19
TRAPPC3-208ENST00000616074 SMPD3Q9NY59 655 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC3-208ENST00000616074 ETAA1Q9NY74 926 aa16.26■□□□□ 0.19
TRAPPC3-208ENST00000616074 GNG12Q9UBI6 72 aa16.26■□□□□ 0.19
TRAPPC3-208ENST00000616074 DIMT1Q9UNQ2 313 aaKnown RBP16.26■□□□□ 0.19
TRAPPC3-208ENST00000616074 MRPS28Q9Y2Q9 187 aaKnown RBP16.26■□□□□ 0.19
TRAPPC3-208ENST00000616074 MCRIP1C9JLW8 97 aa16.25■□□□□ 0.19
TRAPPC3-208ENST00000616074 SPINT2O43291 252 aa16.25■□□□□ 0.19
TRAPPC3-208ENST00000616074 MYL12AP19105 171 aa16.25■□□□□ 0.19
TRAPPC3-208ENST00000616074 SOX6P35712 828 aa16.25■□□□□ 0.19
TRAPPC3-208ENST00000616074 C6orf183Q5T699 404 aa16.25■□□□□ 0.19
TRAPPC3-208ENST00000616074 RAB12Q6IQ22 244 aa16.25■□□□□ 0.19
TRAPPC3-208ENST00000616074 GLIPR1L1Q6UWM5 242 aa16.25■□□□□ 0.19
TRAPPC3-208ENST00000616074 CYYR1Q96J86 154 aa16.25■□□□□ 0.19
TRAPPC3-208ENST00000616074 PGLYRP3Q96LB9 341 aa16.25■□□□□ 0.19
TRAPPC3-208ENST00000616074 PRR25Q96S07 402 aa16.25■□□□□ 0.19
TRAPPC3-208ENST00000616074 CKLFQ9UBR5 152 aa16.25■□□□□ 0.19
TRAPPC3-208ENST00000616074 EXOSC1Q9Y3B2 195 aaKnown RBP16.25■□□□□ 0.19
TRAPPC3-208ENST00000616074 IRGMA1A4Y4 181 aa16.24■□□□□ 0.19
TRAPPC3-208ENST00000616074 IGHG4P01861 327 aa16.24■□□□□ 0.19
TRAPPC3-208ENST00000616074 HBZP02008 142 aa16.24■□□□□ 0.19
TRAPPC3-208ENST00000616074 FSTP19883 344 aa16.24■□□□□ 0.19
TRAPPC3-208ENST00000616074 VDAC1P21796 283 aa16.24■□□□□ 0.19
TRAPPC3-208ENST00000616074 TMEM30BQ3MIR4 351 aa16.24■□□□□ 0.19
TRAPPC3-208ENST00000616074 YIF1BQ5BJH7 314 aa16.24■□□□□ 0.19
TRAPPC3-208ENST00000616074 C9orf66Q5T8R8 295 aa16.24■□□□□ 0.19
TRAPPC3-208ENST00000616074 GAPTQ8N292 157 aa16.24■□□□□ 0.19
TRAPPC3-208ENST00000616074 JAGN1Q8N5M9 183 aa16.24■□□□□ 0.19
TRAPPC3-208ENST00000616074 RAB9BQ9NP90 201 aa16.24■□□□□ 0.19
TRAPPC3-208ENST00000616074 LSM4Q9Y4Z0 139 aaKnown RBP16.24■□□□□ 0.19
TRAPPC3-208ENST00000616074 A0A1W2PPK0 400 aa16.23■□□□□ 0.19
TRAPPC3-208ENST00000616074 IGF1P05019 195 aa16.23■□□□□ 0.19
TRAPPC3-208ENST00000616074 RCC1P18754 421 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms