RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 SAMD4AQ9UPU9 718 aaKnown RBP6.92□□□□□ -1.3
CTCFL-220ENST00000608858 TRAV24A0A0B4J272 114 aa6.91□□□□□ -1.3
CTCFL-220ENST00000608858 ARPC1BO15143 372 aaKnown RBP6.91□□□□□ -1.3
CTCFL-220ENST00000608858 NBR2O15453 112 aa6.91□□□□□ -1.3
CTCFL-220ENST00000608858 SYT7O43581 403 aa6.91□□□□□ -1.3
CTCFL-220ENST00000608858 ZNF254O75437 659 aa6.91□□□□□ -1.3
CTCFL-220ENST00000608858 FABP3P05413 133 aa6.91□□□□□ -1.3
CTCFL-220ENST00000608858 CSN2P05814 226 aa6.91□□□□□ -1.3
CTCFL-220ENST00000608858 IL3RAP26951 378 aa6.91□□□□□ -1.3
CTCFL-220ENST00000608858 CD40LGP29965 261 aa6.91□□□□□ -1.3
CTCFL-220ENST00000608858 BMI1P35226 326 aa6.91□□□□□ -1.3
CTCFL-220ENST00000608858 TMEM267Q0VDI3 215 aaPredicted RBP6.91□□□□□ -1.3
CTCFL-220ENST00000608858 DEFB114Q30KQ6 69 aa6.91□□□□□ -1.3
CTCFL-220ENST00000608858 CT45A1Q5HYN5 189 aa6.91□□□□□ -1.3
CTCFL-220ENST00000608858 ZDHHC13Q8IUH4 622 aa6.91□□□□□ -1.3
CTCFL-220ENST00000608858 OR10V1Q8NGI7 309 aa6.91□□□□□ -1.3
CTCFL-220ENST00000608858 CT45A3Q8NHU0 189 aa6.91□□□□□ -1.3
CTCFL-220ENST00000608858 ADI1Q9BV57 179 aa6.91□□□□□ -1.3
CTCFL-220ENST00000608858 YIPF3Q9GZM5 350 aa6.91□□□□□ -1.3
CTCFL-220ENST00000608858 COMMD4Q9H0A8 199 aa6.91□□□□□ -1.3
CTCFL-220ENST00000608858 LINC00574Q9H8X3 128 aa6.91□□□□□ -1.3
CTCFL-220ENST00000608858 TMBIM4Q9HC24 238 aa6.91□□□□□ -1.3
CTCFL-220ENST00000608858 ZNF581Q9P0T4 197 aa6.91□□□□□ -1.3
CTCFL-220ENST00000608858 APLNQ9ULZ1 77 aa6.91□□□□□ -1.3
CTCFL-220ENST00000608858 AP3M1Q9Y2T2 418 aa6.91□□□□□ -1.3
CTCFL-220ENST00000608858 SNX5Q9Y5X3 404 aa6.91□□□□□ -1.3
CTCFL-220ENST00000608858 R4GMQ9 66 aa6.91□□□□□ -1.3
CTCFL-220ENST00000608858 APOBP04114 4563 aaKnown RBP6.9□□□□□ -1.3
CTCFL-220ENST00000608858 MSGN1A6NI15 193 aa6.9□□□□□ -1.3
CTCFL-220ENST00000608858 GMNNO75496 209 aa6.9□□□□□ -1.3
CTCFL-220ENST00000608858 GATBO75879 557 aaKnown RBP6.9□□□□□ -1.3
CTCFL-220ENST00000608858 CSTBP04080 98 aaKnown RBP6.9□□□□□ -1.3
CTCFL-220ENST00000608858 SEMG1P04279 462 aa6.9□□□□□ -1.3
CTCFL-220ENST00000608858 CTRB1P17538 263 aa6.9□□□□□ -1.3
CTCFL-220ENST00000608858 ROM1Q03395 351 aa6.9□□□□□ -1.3
CTCFL-220ENST00000608858 LSAMPQ13449 338 aa6.9□□□□□ -1.3
CTCFL-220ENST00000608858 GINS1Q14691 196 aa6.9□□□□□ -1.3
CTCFL-220ENST00000608858 PLGLAQ15195 96 aa6.9□□□□□ -1.3
CTCFL-220ENST00000608858 MAPRE2Q15555 327 aa6.9□□□□□ -1.3
CTCFL-220ENST00000608858 RPEL1Q2QD12 228 aa6.9□□□□□ -1.3
CTCFL-220ENST00000608858 RSBN1Q5VWQ0 802 aaPredicted RBP6.9□□□□□ -1.3
CTCFL-220ENST00000608858 ZNF660Q6AZW8 331 aaPredicted RBP6.9□□□□□ -1.3
CTCFL-220ENST00000608858 CTRB2Q6GPI1 263 aa6.9□□□□□ -1.3
CTCFL-220ENST00000608858 WDR93Q6P2C0 686 aa6.9□□□□□ -1.3
CTCFL-220ENST00000608858 SLC25A48Q6ZT89 311 aaKnown RBP6.9□□□□□ -1.3
CTCFL-220ENST00000608858 C5orf24Q7Z6I8 188 aa6.9□□□□□ -1.3
CTCFL-220ENST00000608858 CROCCP2Q86T23 111 aa6.9□□□□□ -1.3
CTCFL-220ENST00000608858 LINC00311Q8N616 119 aa6.9□□□□□ -1.3
CTCFL-220ENST00000608858 TEX47Q8TBZ9 253 aa6.9□□□□□ -1.3
CTCFL-220ENST00000608858 DYNLRB2Q8TF09 96 aa6.9□□□□□ -1.3
CTCFL-220ENST00000608858 C2CD4CQ8TF44 421 aa6.9□□□□□ -1.3
CTCFL-220ENST00000608858 FGGYQ96C11 551 aa6.9□□□□□ -1.3
CTCFL-220ENST00000608858 NIPSNAP1Q9BPW8 284 aa6.9□□□□□ -1.3
CTCFL-220ENST00000608858 IL1RAPQ9NPH3 570 aa6.9□□□□□ -1.3
CTCFL-220ENST00000608858 PEF1Q9UBV8 284 aaKnown RBP6.9□□□□□ -1.3
CTCFL-220ENST00000608858 DEFB4AO15263 64 aa6.89□□□□□ -1.31
CTCFL-220ENST00000608858 E2F6O75461 281 aa6.89□□□□□ -1.31
CTCFL-220ENST00000608858 KDM4BO94953 1096 aa6.89□□□□□ -1.31
CTCFL-220ENST00000608858 OCM2P0CE71 109 aa6.89□□□□□ -1.31
CTCFL-220ENST00000608858 OCMP0CE72 109 aaPredicted RBP6.89□□□□□ -1.31
CTCFL-220ENST00000608858 TMEM225BP0DP42 221 aa6.89□□□□□ -1.31
CTCFL-220ENST00000608858 ATF1P18846 271 aa6.89□□□□□ -1.31
CTCFL-220ENST00000608858 GZMHP20718 246 aa6.89□□□□□ -1.31
CTCFL-220ENST00000608858 HMGA2P52926 109 aa6.89□□□□□ -1.31
CTCFL-220ENST00000608858 CXCR4P61073 352 aa6.89□□□□□ -1.31
CTCFL-220ENST00000608858 RBMS2Q15434 407 aaKnown RBP6.89□□□□□ -1.31
CTCFL-220ENST00000608858 TMEM236Q5W0B7 351 aa6.89□□□□□ -1.31
CTCFL-220ENST00000608858 ZNF322Q6U7Q0 402 aaPredicted RBP6.89□□□□□ -1.31
CTCFL-220ENST00000608858 WFDC3Q8IUB2 231 aa6.89□□□□□ -1.31
CTCFL-220ENST00000608858 PRR18Q8N4B5 295 aa6.89□□□□□ -1.31
CTCFL-220ENST00000608858 GVQW1Q8N7I0 195 aa6.89□□□□□ -1.31
CTCFL-220ENST00000608858 CHST4Q8NCG5 386 aa6.89□□□□□ -1.31
CTCFL-220ENST00000608858 OR10A7Q8NGE5 316 aa6.89□□□□□ -1.31
CTCFL-220ENST00000608858 C11orf45Q8TAV5 145 aa6.89□□□□□ -1.31
CTCFL-220ENST00000608858 CNIH3Q8TBE1 160 aa6.89□□□□□ -1.31
CTCFL-220ENST00000608858 ADAT3Q96EY9 351 aaPredicted RBP6.89□□□□□ -1.31
CTCFL-220ENST00000608858 HOPXQ9BPY8 73 aaPredicted RBP6.89□□□□□ -1.31
CTCFL-220ENST00000608858 CHST5Q9GZS9 411 aa6.89□□□□□ -1.31
CTCFL-220ENST00000608858 CST11Q9H112 138 aa6.89□□□□□ -1.31
CTCFL-220ENST00000608858 MBNL3Q9NUK0 354 aaKnown RBP6.89□□□□□ -1.31
CTCFL-220ENST00000608858 GFOD1Q9NXC2 390 aa6.89□□□□□ -1.31
CTCFL-220ENST00000608858 DHRS7CA6NNS2 312 aa6.88□□□□□ -1.31
CTCFL-220ENST00000608858 C15orf65H3BRN8 121 aa6.88□□□□□ -1.31
CTCFL-220ENST00000608858 KRT36O76013 467 aa6.88□□□□□ -1.31
CTCFL-220ENST00000608858 ALDH3A2P51648 485 aa6.88□□□□□ -1.31
CTCFL-220ENST00000608858 AKIRIN2Q53H80 203 aa6.88□□□□□ -1.31
CTCFL-220ENST00000608858 PYHIN1Q6K0P9 492 aa6.88□□□□□ -1.31
CTCFL-220ENST00000608858 Q6ZSR3 168 aa6.88□□□□□ -1.31
CTCFL-220ENST00000608858 SLC16A13Q7RTY0 426 aa6.88□□□□□ -1.31
CTCFL-220ENST00000608858 HDXQ7Z353 690 aa6.88□□□□□ -1.31
CTCFL-220ENST00000608858 BCDIN3DQ7Z5W3 292 aaKnown RBP6.88□□□□□ -1.31
CTCFL-220ENST00000608858 ARPINQ7Z6K5 226 aa6.88□□□□□ -1.31
CTCFL-220ENST00000608858 Q8N1X5 172 aa6.88□□□□□ -1.31
CTCFL-220ENST00000608858 OR52B4Q8NGK2 314 aa6.88□□□□□ -1.31
CTCFL-220ENST00000608858 ASB17Q8WXJ9 295 aa6.88□□□□□ -1.31
CTCFL-220ENST00000608858 TBX5Q99593 518 aa6.88□□□□□ -1.31
CTCFL-220ENST00000608858 MRPL20Q9BYC9 149 aaKnown RBP6.88□□□□□ -1.31
CTCFL-220ENST00000608858 SLA2Q9H6Q3 261 aa6.88□□□□□ -1.31
CTCFL-220ENST00000608858 RNF150Q9ULK6 438 aa6.88□□□□□ -1.31
CTCFL-220ENST00000608858 DMBT1Q9UGM3 2413 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms