RNA–Protein interactions for RNA: ENST00000601849.1

VRK3-224, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-224ENST00000601849 RPL36Q9Y3U8 105 aaKnown RBP7.51□□□□□ -1.21
VRK3-224ENST00000601849 GMPPBQ9Y5P6 360 aa7.51□□□□□ -1.21
VRK3-224ENST00000601849 TRAV39A0A0B4J263 110 aa7.5□□□□□ -1.21
VRK3-224ENST00000601849 SAC3D1A6NKF1 404 aa7.5□□□□□ -1.21
VRK3-224ENST00000601849 AIPO00170 330 aa7.5□□□□□ -1.21
VRK3-224ENST00000601849 GEMIN2O14893 280 aaKnown RBP7.5□□□□□ -1.21
VRK3-224ENST00000601849 CD40LGP29965 261 aa7.5□□□□□ -1.21
VRK3-224ENST00000601849 SOX2P48431 317 aa7.5□□□□□ -1.21
VRK3-224ENST00000601849 RBM11P57052 281 aaKnown RBP7.5□□□□□ -1.21
VRK3-224ENST00000601849 ZNF616Q08AN1 781 aa7.5□□□□□ -1.21
VRK3-224ENST00000601849 RAB40BQ12829 278 aa7.5□□□□□ -1.21
VRK3-224ENST00000601849 CCDC58Q4VC31 144 aa7.5□□□□□ -1.21
VRK3-224ENST00000601849 ASCL4Q6XD76 172 aa7.5□□□□□ -1.21
VRK3-224ENST00000601849 TMPRSS11AQ6ZMR5 421 aa7.5□□□□□ -1.21
VRK3-224ENST00000601849 Q8N6K4 173 aa7.5□□□□□ -1.21
VRK3-224ENST00000601849 OR51A2Q8NGJ7 313 aa7.5□□□□□ -1.21
VRK3-224ENST00000601849 OR10K1Q8NGX5 313 aa7.5□□□□□ -1.21
VRK3-224ENST00000601849 MUC7Q8TAX7 377 aa7.5□□□□□ -1.21
VRK3-224ENST00000601849 LGALS12Q96DT0 336 aa7.5□□□□□ -1.21
VRK3-224ENST00000601849 KCTD7Q96MP8 289 aa7.5□□□□□ -1.21
VRK3-224ENST00000601849 PDCD1LG2Q9BQ51 273 aa7.5□□□□□ -1.21
VRK3-224ENST00000601849 ISG20L2Q9H9L3 353 aaKnown RBP7.5□□□□□ -1.21
VRK3-224ENST00000601849 ERVK13-1Q9NX77 482 aa7.5□□□□□ -1.21
VRK3-224ENST00000601849 IL36GQ9NZH8 169 aa7.5□□□□□ -1.21
VRK3-224ENST00000601849 KCNIP1Q9NZI2 227 aa7.5□□□□□ -1.21
VRK3-224ENST00000601849 SCOCQ9UIL1 159 aa7.5□□□□□ -1.21
VRK3-224ENST00000601849 ZNF580Q9UK33 172 aa7.5□□□□□ -1.21
VRK3-224ENST00000601849 CA11O75493 328 aa7.49□□□□□ -1.21
VRK3-224ENST00000601849 CDRT1O95170 752 aa7.49□□□□□ -1.21
VRK3-224ENST00000601849 MT-ND4P03905 459 aa7.49□□□□□ -1.21
VRK3-224ENST00000601849 ALPLP05186 524 aa7.49□□□□□ -1.21
VRK3-224ENST00000601849 LYL1P12980 280 aa7.49□□□□□ -1.21
VRK3-224ENST00000601849 SERPINA2P20848 420 aa7.49□□□□□ -1.21
VRK3-224ENST00000601849 PSMB8P28062 276 aa7.49□□□□□ -1.21
VRK3-224ENST00000601849 BDKRB2P30411 391 aa7.49□□□□□ -1.21
VRK3-224ENST00000601849 ALDH3A2P51648 485 aa7.49□□□□□ -1.21
VRK3-224ENST00000601849 MED21Q13503 144 aa7.49□□□□□ -1.21
VRK3-224ENST00000601849 MMDQ15546 238 aa7.49□□□□□ -1.21
VRK3-224ENST00000601849 ZIK1Q3SY52 487 aaPredicted RBP7.49□□□□□ -1.21
VRK3-224ENST00000601849 SYT6Q5T7P8 510 aaPredicted RBP7.49□□□□□ -1.21
VRK3-224ENST00000601849 DDI2Q5TDH0 399 aa7.49□□□□□ -1.21
VRK3-224ENST00000601849 RPL22L1Q6P5R6 122 aaKnown RBP7.49□□□□□ -1.21
VRK3-224ENST00000601849 SLC25A48Q6ZT89 311 aaKnown RBP7.49□□□□□ -1.21
VRK3-224ENST00000601849 PRR18Q8N4B5 295 aa7.49□□□□□ -1.21
VRK3-224ENST00000601849 TMEM104Q8NE00 496 aa7.49□□□□□ -1.21
VRK3-224ENST00000601849 ST6GALNAC6Q969X2 333 aa7.49□□□□□ -1.21
VRK3-224ENST00000601849 TMEM106AQ96A25 262 aa7.49□□□□□ -1.21
VRK3-224ENST00000601849 MRPS24Q96EL2 167 aaKnown RBP7.49□□□□□ -1.21
VRK3-224ENST00000601849 ZNF251Q9BRH9 671 aa7.49□□□□□ -1.21
VRK3-224ENST00000601849 OR51J1Q9H342 316 aa7.49□□□□□ -1.21
VRK3-224ENST00000601849 PLSCR3Q9NRY6 295 aa7.49□□□□□ -1.21
VRK3-224ENST00000601849 TAS2R4Q9NYW5 299 aa7.49□□□□□ -1.21
VRK3-224ENST00000601849 KIAA1456Q9P272 454 aa7.49□□□□□ -1.21
VRK3-224ENST00000601849 LRRC42Q9Y546 428 aa7.49□□□□□ -1.21
VRK3-224ENST00000601849 IGHV3-43A0A0B4J1X8 118 aa7.48□□□□□ -1.21
VRK3-224ENST00000601849 IRGMA1A4Y4 181 aa7.48□□□□□ -1.21
VRK3-224ENST00000601849 C15orf65H3BRN8 121 aa7.48□□□□□ -1.21
VRK3-224ENST00000601849 OVOL1O14753 267 aa7.48□□□□□ -1.21
VRK3-224ENST00000601849 SAP30O75446 220 aa7.48□□□□□ -1.21
VRK3-224ENST00000601849 RGS11O94810 467 aa7.48□□□□□ -1.21
VRK3-224ENST00000601849 IGHV3-43DP0DP04 118 aa7.48□□□□□ -1.21
VRK3-224ENST00000601849 ZNF137PP52743 207 aa7.48□□□□□ -1.21
VRK3-224ENST00000601849 F2RL1P55085 397 aa7.48□□□□□ -1.21
VRK3-224ENST00000601849 RUNX1Q01196 453 aa7.48□□□□□ -1.21
VRK3-224ENST00000601849 TMEM267Q0VDI3 215 aaPredicted RBP7.48□□□□□ -1.21
VRK3-224ENST00000601849 FHL3Q13643 280 aa7.48□□□□□ -1.21
VRK3-224ENST00000601849 SLC22A6Q4U2R8 563 aa7.48□□□□□ -1.21
VRK3-224ENST00000601849 NKAPLQ5M9Q1 402 aa7.48□□□□□ -1.21
VRK3-224ENST00000601849 CASC10Q5T4H9 136 aa7.48□□□□□ -1.21
VRK3-224ENST00000601849 LIN54Q6MZP7 749 aa7.48□□□□□ -1.21
VRK3-224ENST00000601849 ZNF529Q6P280 563 aa7.48□□□□□ -1.21
VRK3-224ENST00000601849 ZNF497Q6ZNH5 498 aa7.48□□□□□ -1.21
VRK3-224ENST00000601849 FAM71E2Q8N5Q1 922 aa7.48□□□□□ -1.21
VRK3-224ENST00000601849 OR6Q1Q8NGQ2 317 aa7.48□□□□□ -1.21
VRK3-224ENST00000601849 RCHY1Q96PM5 261 aa7.48□□□□□ -1.21
VRK3-224ENST00000601849 CST11Q9H112 138 aa7.48□□□□□ -1.21
VRK3-224ENST00000601849 OR2S2Q9NQN1 319 aa7.48□□□□□ -1.21
VRK3-224ENST00000601849 ETAA1Q9NY74 926 aa7.48□□□□□ -1.21
VRK3-224ENST00000601849 RNF150Q9ULK6 438 aa7.48□□□□□ -1.21
VRK3-224ENST00000601849 TRAV41A0A0B4J266 112 aa7.47□□□□□ -1.21
VRK3-224ENST00000601849 ZNF736B4DX44 427 aaPredicted RBP7.47□□□□□ -1.21
VRK3-224ENST00000601849 EI24O14681 340 aa7.47□□□□□ -1.21
VRK3-224ENST00000601849 ARPC1BO15143 372 aaKnown RBP7.47□□□□□ -1.21
VRK3-224ENST00000601849 LANCL1O43813 399 aa7.47□□□□□ -1.21
VRK3-224ENST00000601849 GLAP06280 429 aa7.47□□□□□ -1.21
VRK3-224ENST00000601849 SLC2A2P11168 524 aaPredicted RBP7.47□□□□□ -1.21
VRK3-224ENST00000601849 MYF6P23409 242 aa7.47□□□□□ -1.21
VRK3-224ENST00000601849 RAB9AP51151 201 aa7.47□□□□□ -1.21
VRK3-224ENST00000601849 CFHR3Q02985 330 aa7.47□□□□□ -1.21
VRK3-224ENST00000601849 GABPB1Q06547 395 aaPredicted RBP7.47□□□□□ -1.21
VRK3-224ENST00000601849 RIPK1Q13546 671 aa7.47□□□□□ -1.21
VRK3-224ENST00000601849 ZFP1Q6P2D0 407 aa7.47□□□□□ -1.21
VRK3-224ENST00000601849 ZNF491Q8N8L2 437 aa7.47□□□□□ -1.21
VRK3-224ENST00000601849 OR10V1Q8NGI7 309 aa7.47□□□□□ -1.21
VRK3-224ENST00000601849 RHOXF1Q8NHV9 184 aa7.47□□□□□ -1.21
VRK3-224ENST00000601849 UBALD1Q8TB05 177 aa7.47□□□□□ -1.21
VRK3-224ENST00000601849 OR4C12Q96R67 309 aa7.47□□□□□ -1.21
VRK3-224ENST00000601849 ZNF184Q99676 751 aaPredicted RBP7.47□□□□□ -1.21
VRK3-224ENST00000601849 HSPB9Q9BQS6 159 aa7.47□□□□□ -1.21
VRK3-224ENST00000601849 AMBNQ9NP70 447 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms